Data search
Results for MligTC455_44673
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_44673 | 1141 | 23.78 | Mlig455_011401, Mlig455_060935 | Neo: - Age: Down-Up-Up |
CIAO1 | Mlig455_011401 {REF} {Length: 1199} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=159.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=70.0]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=40.6]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=26.8]; Transcription factor IIIC subunit delta N-term [PF12657.9, score=23.2]; WD40-like Beta Propeller Repeat [PF07676.14, score=22.8]; Proteasome subunit A N-terminal signature [PF10584.11, score=20.1]; IKI3 family [PF04762.14, score=19.1]} {Human: ENSG00000144021, CIAO1, cytosolic iron-sulfur assembly component 1, [RH, Score=268, Expect=6e-88]} {Mouse: ENSMUSG00000003662, Ciao1, cytosolic iron-sulfur protein assembly 1, [RH, Score=270, Expect=1e-88]} {Dmel: FBgn0033972, Ciao1, [RH, Score=265, Expect=6e-87]} {Celegans: WBGene00012479, Y18D10A.9, Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog, [RH, Score=211, Expect=6e-66]} {Smed: dd_Smed_v6_6661_0_1, dd_Smed_v6_6661_0_1, [RH, Score=241, Expect=8e-78]} {RNA1509_6667} {RNA1310_26308} {RNA815_12985} Mlig455_060935 {REF} {Length: 1205} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=165.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=73.7]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=40.9]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=26.9]; Transcription factor IIIC subunit delta N-term [PF12657.9, score=23.3]; WD40-like Beta Propeller Repeat [PF07676.14, score=22.9]; Proteasome subunit A N-terminal signature [PF10584.11, score=20.0]; IKI3 family [PF04762.14, score=19.3]} {Human: ENSG00000144021, CIAO1, cytosolic iron-sulfur assembly component 1, [RH, Score=269, Expect=3e-88]} {Mouse: ENSMUSG00000003662, Ciao1, cytosolic iron-sulfur protein assembly 1, [RH, Score=270, Expect=1e-88]} {Dmel: FBgn0033972, Ciao1, [RH, Score=266, Expect=2e-87]} {Celegans: WBGene00012479, Y18D10A.9, Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog, [RH, Score=211, Expect=4e-66]} {Smed: dd_Smed_v6_6661_0_1, dd_Smed_v6_6661_0_1, [RH, Score=243, Expect=3e-78]} {RNA1509_6667} {RNA1310_26308, RNA1509_6667} {RNA1509_6667, RNA815_12985} |
Cumulative graph for MligTC455_44673
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.135 | 4.884 | 0.87766 | 1.00000 | |
| RegionR2 | -0.557 | 4.884 | 0.22325 | 0.59329 | |
| RegionR3 | -0.173 | 4.884 | 0.65115 | 1.00000 | |
| RegionR4 | 0.467 | 4.884 | 0.27708 | 0.58391 | |
| RegionR5 | 0.963 | 4.884 | 0.00411 | 0.02989 | |
| RegionR6 | 0.116 | 4.884 | 0.75889 | 1.00000 | |
| RegionR7 | -1.216 | 4.884 | 0.01861 | 0.25132 | |
| RegionR8 | 0.533 | 4.884 | 0.29650 | 0.92582 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -8.417 | 4.884 | 0.01206 | 0.47137 | |
| RegenerationR2 | -0.702 | 4.884 | 0.10072 | 0.50199 | |
| RegenerationR3 | -0.133 | 4.884 | 0.75952 | 0.96750 | |
| RegenerationR4 | -0.233 | 4.884 | 0.60096 | 0.91366 | |
| RegenerationR5 | -0.487 | 4.884 | 0.23513 | 0.66891 | |
| RegenerationR6 | 0.018 | 4.884 | 0.96865 | 1.00000 | |
| RegenerationBL | -1.627 | 4.884 | 0.00291 | 0.04600 | |
| RegenerationTP | -0.486 | 4.884 | 0.36788 | 0.80578 |
Genes with expression patterns similar to MligTC455_44673
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_44673 | 1141 | 23.78 | Mlig455_011401, Mlig455_060935 | Neo: - Age: Down-Up-Up |
CIAO1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_011401 {REF} {Length: 1199} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=159.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=70.0]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=40.6]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=26.8]; Transcription factor IIIC subunit delta N-term [PF12657.9, score=23.2]; WD40-like Beta Propeller Repeat [PF07676.14, score=22.8]; Proteasome subunit A N-terminal signature [PF10584.11, score=20.1]; IKI3 family [PF04762.14, score=19.1]} {Human: ENSG00000144021, CIAO1, cytosolic iron-sulfur assembly component 1, [RH, Score=268, Expect=6e-88]} {Mouse: ENSMUSG00000003662, Ciao1, cytosolic iron-sulfur protein assembly 1, [RH, Score=270, Expect=1e-88]} {Dmel: FBgn0033972, Ciao1, [RH, Score=265, Expect=6e-87]} {Celegans: WBGene00012479, Y18D10A.9, Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog, [RH, Score=211, Expect=6e-66]} {Smed: dd_Smed_v6_6661_0_1, dd_Smed_v6_6661_0_1, [RH, Score=241, Expect=8e-78]} {RNA1509_6667} {RNA1310_26308} {RNA815_12985} Mlig455_060935 {REF} {Length: 1205} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=165.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=73.7]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=40.9]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=26.9]; Transcription factor IIIC subunit delta N-term [PF12657.9, score=23.3]; WD40-like Beta Propeller Repeat [PF07676.14, score=22.9]; Proteasome subunit A N-terminal signature [PF10584.11, score=20.0]; IKI3 family [PF04762.14, score=19.3]} {Human: ENSG00000144021, CIAO1, cytosolic iron-sulfur assembly component 1, [RH, Score=269, Expect=3e-88]} {Mouse: ENSMUSG00000003662, Ciao1, cytosolic iron-sulfur protein assembly 1, [RH, Score=270, Expect=1e-88]} {Dmel: FBgn0033972, Ciao1, [RH, Score=266, Expect=2e-87]} {Celegans: WBGene00012479, Y18D10A.9, Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog, [RH, Score=211, Expect=4e-66]} {Smed: dd_Smed_v6_6661_0_1, dd_Smed_v6_6661_0_1, [RH, Score=243, Expect=3e-78]} {RNA1509_6667} {RNA1310_26308, RNA1509_6667} {RNA1509_6667, RNA815_12985} |
| 2. | MligTC455_49169 | 409 | 8.52 | Mlig455_014589 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 2.141 |
SLC30A5 | 0.969 | - | - | - | - | - | 0.969 | Mlig455_014589 {REF} {Length: 3364} {TRANSSPLICED} {Pfam: Cation efflux family [PF01545.23, score=140.9]} {Human: ENSG00000145740, SLC30A5, solute carrier family 30 member 5, [Score=456, Expect=3e-150]} {Mouse: ENSMUSG00000021629, Slc30a5, solute carrier family 30 (zinc transporter), member 5, [Score=446, Expect=1e-146]} {Dmel: FBgn0037875, ZnT86D, Zinc transporter 86D, [Score=136, Expect=8e-35]} {Celegans: WBGene00013668, Y105E8A.3, [Score=327, Expect=2e-101]} {Smed: dd_Smed_v6_4378_0_1, dd_Smed_v6_4378_0_1, [Score=401, Expect=1e-129]} {RNA1509_47381} {RNA1310_7900} {RNA815_16274} |
| 3. | MligTC455_09032 | 2197 | 45.76 | Mlig455_008555, Mlig455_018198 | Neo: Int S/G2/M Age: Down-Up-Up |
DPH2 | 0.966 | - | - | - | - | - | 0.966 | Mlig455_008555 {REF} {Length: 1773} {TRANSSPLICED} {Pfam: Putative diphthamide synthesis protein [PF01866.19, score=116.7]} {Human: ENSG00000132768, DPH2, DPH2 homolog, [RH, Score=114, Expect=9e-27]} {Mouse: ENSMUSG00000028540, Dph2, DPH2 homolog, [RH, Score=124, Expect=3e-30]} {Dmel: FBgn0038272, CG7265, [RH, Score=117, Expect=4e-28]} {Celegans: WBGene00007488, dph-2, 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2, [RH, Score=128, Expect=6e-32]} {Smed: dd_Smed_v6_9681_0_1, dd_Smed_v6_9681_0_1, [RH, Score=115, Expect=1e-27]} {RNA1509_11038} {RNA1310_14290, RNA1509_11038} {RNA1509_11038, RNA815_6505} Mlig455_018198 {REF} {Length: 1773} {TRANSSPLICED} {Pfam: Putative diphthamide synthesis protein [PF01866.19, score=120.5]} {Human: ENSG00000132768, DPH2, DPH2 homolog, [RH, Score=109, Expect=4e-25]} {Mouse: ENSMUSG00000028540, Dph2, DPH2 homolog, [RH, Score=120, Expect=6e-29]} {Dmel: FBgn0038272, CG7265, [RH, Score=117, Expect=6e-28]} {Celegans: WBGene00007488, dph-2, 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2, [RH, Score=129, Expect=3e-32]} {Smed: dd_Smed_v6_9681_0_1, dd_Smed_v6_9681_0_1, [RH, Score=110, Expect=7e-26]} {RNA1509_11038} {RNA1310_14290} {RNA815_6505} |
| 4. | MligTC455_27952 | 90 | 1.87 | Mlig455_051112 | Neo: - Age: - |
SLC17A5 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_051112 {REF} {Length: 3048} {Pfam: Major Facilitator Superfamily [PF07690.18, score=148.0]; Sugar (and other) transporter [PF00083.26, score=23.7]} {Human: ENSG00000119899, SLC17A5, solute carrier family 17 member 5, [Score=321, Expect=1e-104]; ENSG00000104888, SLC17A7, solute carrier family 17 member 7, [Score=306, Expect=5e-99]; ENSG00000179520, SLC17A8, solute carrier family 17 member 8, [Score=305, Expect=3e-97]} {Mouse: ENSMUSG00000049624, Slc17a5, solute carrier family 17 (anion/sugar transporter), member 5, [Score=306, Expect=7e-99]; ENSMUSG00000070570, Slc17a7, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7, [Score=305, Expect=9e-98]; ENSMUSG00000030500, Slc17a6, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6, [Score=304, Expect=3e-97]; ENSMUSG00000019935, Slc17a8, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8, [Score=295, Expect=2e-93]} {Dmel: FBgn0030452, MFS10, Major Facilitator Superfamily Transporter 10, [Score=321, Expect=4e-104]} {Celegans: WBGene00008000, slc-17.2, Uncharacterized transporter slc-17.2, [Score=261, Expect=4e-82]} {Smed: dd_Smed_v6_1874_0_1, dd_Smed_v6_1874_0_1, [Score=303, Expect=3e-98]} {RNA1509_20478} {RNA1310_14525} {RNA815_29510} |
| 5. | MligTC455_44505 | 766 | 15.96 | Mlig455_006545 | Neo: Irradiation Age: - Region-enriched R5: 1.371/0.00002 |
NUP107 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_006545 {REF} {Length: 8013} {Pfam: Nuclear pore protein 84 / 107 [PF04121.15, score=367.2]} {Human: ENSG00000111581, NUP107, nucleoporin 107, [RH, Score=359, Expect=3e-109]} {Mouse: ENSMUSG00000052798, Nup107, nucleoporin 107, [RH, Score=358, Expect=1e-108]} {Dmel: FBgn0027868, Nup107, Nucleoporin 107kD, [RH, Score=265, Expect=3e-75]} {Smed: dd_Smed_v6_5070_0_1, dd_Smed_v6_5070_0_1, [RH, Score=206, Expect=3e-55]} {RNA1509_22557, RNA1509_33997, RNA1509_55961, RNA1509_7073} {RNA1310_4995, RNA1509_22557, RNA1509_33997, RNA1509_55961, RNA1509_7073} {RNA1509_22557, RNA1509_33997, RNA1509_55961, RNA1509_7073, RNA815_1737} |