TomoSeq data search

Data search

Results for MligTC455_44718

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_44718	128	2.67	Mlig455_035814	Neo: - Age: Down-Up-Up Region-enriched R5: 1.845/0.03386	CASP9	Mlig455_035814 {REF} {Length: 2530} {TRANSSPLICED} {Pfam: Caspase domain [PF00656.24, score=118.8]; Caspase recruitment domain [PF00619.23, score=47.2]} {Human: ENSG00000132906, CASP9, caspase 9, [RH, Score=153, Expect=2e-41]} {Mouse: ENSMUSG00000028914, Casp9, caspase 9, [Score=151, Expect=3e-40]; ENSMUSG00000029863, Casp2, caspase 2, [Score=149, Expect=1e-39]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=121, Expect=2e-30]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [RH, Score=157, Expect=2e-42]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=115, Expect=2e-29]} {RNA1509_6944} {RNA1310_8124} {RNA815_4074}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_44718

128

2.67

Mlig455_035814

Neo: -

Age: Down-Up-Up

Region-enriched R5: 1.845/0.03386

CASP9

Mlig455_035814 {REF} {Length: 2530} {TRANSSPLICED} {Pfam: Caspase domain [PF00656.24, score=118.8]; Caspase recruitment domain [PF00619.23, score=47.2]} {Human: ENSG00000132906, CASP9, caspase 9, [RH, Score=153, Expect=2e-41]} {Mouse: ENSMUSG00000028914, Casp9, caspase 9, [Score=151, Expect=3e-40]; ENSMUSG00000029863, Casp2, caspase 2, [Score=149, Expect=1e-39]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=121, Expect=2e-30]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [RH, Score=157, Expect=2e-42]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=115, Expect=2e-29]} {RNA1509_6944} {RNA1310_8124} {RNA815_4074}

Cumulative graph for MligTC455_44718

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.125	2.145	0.78744	1.00000
RegionR2	1.453	2.145	0.11783	0.42521
RegionR3	1.305	2.145	0.08896	0.52689
RegionR4	-0.312	2.145	0.87081	1.00000
RegionR5	1.845	2.145	0.00485	0.03386
RegionR6	1.13	2.145	0.15937	0.71183
RegionR7	-5.24	2.145	0.02554	0.29951
RegionR8	-0.306	2.145	0.88388	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.41	2.145	0.31050	1.00000
RegenerationR2	-0.33	2.145	0.62313	0.92413
RegenerationR3	-0.35	2.145	0.63102	0.92074
RegenerationR4	0.634	2.145	0.39000	0.80737
RegenerationR5	-0.573	2.145	0.34810	0.76285
RegenerationR6	0.306	2.145	0.68312	0.91600
RegenerationBL	1.752	2.145	0.22550	0.57504
RegenerationTP	1.854	2.145	0.35058	0.79251

Genes with expression patterns similar to MligTC455_44718

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_44718	128	2.67	Mlig455_035814	Neo: - Age: Down-Up-Up Region-enriched R5: 1.845/0.03386	CASP9	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_035814 {REF} {Length: 2530} {TRANSSPLICED} {Pfam: Caspase domain [PF00656.24, score=118.8]; Caspase recruitment domain [PF00619.23, score=47.2]} {Human: ENSG00000132906, CASP9, caspase 9, [RH, Score=153, Expect=2e-41]} {Mouse: ENSMUSG00000028914, Casp9, caspase 9, [Score=151, Expect=3e-40]; ENSMUSG00000029863, Casp2, caspase 2, [Score=149, Expect=1e-39]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=121, Expect=2e-30]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [RH, Score=157, Expect=2e-42]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=115, Expect=2e-29]} {RNA1509_6944} {RNA1310_8124} {RNA815_4074}
2.	MligTC455_33881	86	1.79	Mlig455_055940	Neo: Irradiation Age: -		1.665	-	-	-	-	0.710	0.955	Mlig455_055940 {REF} {Length: 3205} {TRANSSPLICED} {RNA1509_43467} {RNA1310_23763, RNA1509_43467} {RNA1509_43467, RNA815_10205}
3.	MligTC455_12635	46	0.96	Mlig455_035482	Neo: - Age: -		0.965	-	-	-	-	-	0.965	Mlig455_035482 {REF} {Length: 1106} {NoTransDecoderORF} {RNA1509_12003} {RNA1310_15400}
4.	MligTC455_47074	420	8.76	Mlig455_008016	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_008016 {REF} {Length: 2447} {TRANSSPLICED} {Pfam: F-box domain [PF00646.35, score=27.5]; F-box-like [PF12937.9, score=25.3]} {RNA1509_28972} {RNA1310_11116.1} {RNA815_26042}