Data search


search
Exact
Search

Results for MligTC455_44732

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_44732 1173 24.43 Mlig455_031569

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.800

Mlig455_031569 {REF} {Length: 5552} {RNA1509_9869} {RNA1310_4574.2} {RNA815_3308}

Cumulative graph for MligTC455_44732

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.261 4.767 0.21359 0.85442
RegionR2 0.368 4.767 0.36967 0.76432
RegionR3 -0.169 4.767 0.62698 1.00000
RegionR4 -0.399 4.767 0.29505 0.60659
RegionR5 -0.275 4.767 0.39012 0.74554
RegionR6 0.237 4.767 0.48168 1.00000
RegionR7 0.631 4.767 0.12696 0.67120
RegionR8 0.869 4.767 0.08009 0.53788

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.449 4.767 0.76728 1.00000
RegenerationR2 0.394 4.767 0.24651 0.69415
RegenerationR3 0.743 4.767 0.05072 0.39043
RegenerationR4 0.791 4.767 0.03093 0.28416
RegenerationR5 1.075 4.767 0.00182 0.07338
RegenerationR6 1.021 4.767 0.00576 0.09206
RegenerationBL 0.262 4.767 0.51506 0.87824
RegenerationTP 0.215 4.767 0.62477 0.97434


Genes with expression patterns similar to MligTC455_44732

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_44732 1173 24.43 Mlig455_031569

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.800

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_031569 {REF} {Length: 5552} {RNA1509_9869} {RNA1310_4574.2} {RNA815_3308}
2. MligTC455_19376 378 7.87 Mlig455_014578

Neo: -

Age: Down-Up-Down

0.971 - - - - 0.971 - Mlig455_014578 {REF} {Length: 1791} {NoTransDecoderORF} {RNA1509_16408} {RNA1310_41975.1, RNA1509_16408} {RNA1509_16408, RNA815_15355}
3. MligTC455_17295 545 11.35 Mlig455_025108

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.622

0.961 - - - - - 0.961 Mlig455_025108 {REF} {Length: 467} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19286, RNA1509_40995} {RNA1310_11603.1, RNA1509_19286, RNA1509_40995} {RNA1509_19286, RNA1509_40995, RNA815_39462}
4. MligTC455_53585 369 7.68 Mlig455_034445

Neo: -

Age: -

YRDC 0.955 - - - - - 0.955 Mlig455_034445 {REF} {Length: 1952} {Pfam: Telomere recombination [PF01300.20, score=144.6]} {Human: ENSG00000196449, YRDC, yrdC N6-threonylcarbamoyltransferase domain containing, [RH, Score=143, Expect=9e-41]} {Mouse: ENSMUSG00000028889, Yrdc, yrdC domain containing (E.coli), [RH, Score=138, Expect=5e-39]} {Dmel: FBgn0061361, CG33786, [RH, Score=144, Expect=7e-42]} {Celegans: WBGene00012997, Y48C3A.18, [RH, Score=128, Expect=3e-36]} {Smed: dd_Smed_v6_8890_0_1, dd_Smed_v6_8890_0_1, [RH, Score=147, Expect=2e-43]} {RNA1509_7035} {RNA1310_27330} {RNA815_16077.1}
5. MligTC455_19050 594 12.37 Mlig455_009401

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.557

0.952 - - - - - 0.952 Mlig455_009401 {REF} {Length: 1419} {TRANSSPLICED} {Pfam: NADAR domain [PF08719.13, score=172.3]} {Celegans: WBGene00020747, T24A6.7, [RH, Score=126, Expect=5e-37]} {Smed: dd_Smed_v6_17652_0_1, dd_Smed_v6_17652_0_1, [RH, Score=176, Expect=4e-57]} {RNA1509_18595, RNA1509_28040} {RNA1310_53361.2, RNA1509_18595, RNA1509_28040} {RNA1509_18595, RNA1509_28040, RNA815_30431}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA