TomoSeq data search

Data search

Results for MligTC455_44745

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_44745	472	9.84	Mlig455_000621	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.487	EMC4	Mlig455_000621 {REF} {Length: 1411} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1077) [PF06417.14, score=144.5]} {Human: ENSG00000128463, EMC4, ER membrane protein complex subunit 4, [RH, Score=181, Expect=1e-57]} {Mouse: ENSMUSG00000027131, Emc4, ER membrane protein complex subunit 4, [RH, Score=181, Expect=7e-58]} {Dmel: FBgn0037199, CG11137, [RH, Score=160, Expect=5e-50]} {Celegans: WBGene00022776, perm-3, PERMeable eggshell, [RH, Score=128, Expect=1e-37]} {Smed: dd_Smed_v6_2285_0_1, dd_Smed_v6_2285_0_1, [RH, Score=200, Expect=1e-65]} {RNA1509_56137} {RNA1310_27875, RNA1509_56137} {RNA1509_56137, RNA815_15318}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_44745

472

9.84

Mlig455_000621

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.487

EMC4

Mlig455_000621 {REF} {Length: 1411} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1077) [PF06417.14, score=144.5]} {Human: ENSG00000128463, EMC4, ER membrane protein complex subunit 4, [RH, Score=181, Expect=1e-57]} {Mouse: ENSMUSG00000027131, Emc4, ER membrane protein complex subunit 4, [RH, Score=181, Expect=7e-58]} {Dmel: FBgn0037199, CG11137, [RH, Score=160, Expect=5e-50]} {Celegans: WBGene00022776, perm-3, PERMeable eggshell, [RH, Score=128, Expect=1e-37]} {Smed: dd_Smed_v6_2285_0_1, dd_Smed_v6_2285_0_1, [RH, Score=200, Expect=1e-65]} {RNA1509_56137} {RNA1310_27875, RNA1509_56137} {RNA1509_56137, RNA815_15318}

Cumulative graph for MligTC455_44745

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.347	3.594	0.34207	0.98625
RegionR2	0.257	3.594	0.66977	0.99780
RegionR3	-0.58	3.594	0.28611	0.82803
RegionR4	0.119	3.594	0.84133	1.00000
RegionR5	0.685	3.594	0.12941	0.36510
RegionR6	0.453	3.594	0.37128	0.95153
RegionR7	0.708	3.594	0.22237	0.84405
RegionR8	-0.296	3.594	0.71670	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.159	3.594	0.22401	0.95604
RegenerationR2	-0.279	3.594	0.58058	0.90730
RegenerationR3	0.088	3.594	0.88079	1.00000
RegenerationR4	-0.667	3.594	0.25625	0.70436
RegenerationR5	-0.448	3.594	0.38222	0.78818
RegenerationR6	-0.55	3.594	0.33830	0.68460
RegenerationBL	0.195	3.594	0.73593	1.00000
RegenerationTP	0.012	3.594	0.98682	1.00000

Genes with expression patterns similar to MligTC455_44745

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_44745	472	9.84	Mlig455_000621	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.487	EMC4	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_000621 {REF} {Length: 1411} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1077) [PF06417.14, score=144.5]} {Human: ENSG00000128463, EMC4, ER membrane protein complex subunit 4, [RH, Score=181, Expect=1e-57]} {Mouse: ENSMUSG00000027131, Emc4, ER membrane protein complex subunit 4, [RH, Score=181, Expect=7e-58]} {Dmel: FBgn0037199, CG11137, [RH, Score=160, Expect=5e-50]} {Celegans: WBGene00022776, perm-3, PERMeable eggshell, [RH, Score=128, Expect=1e-37]} {Smed: dd_Smed_v6_2285_0_1, dd_Smed_v6_2285_0_1, [RH, Score=200, Expect=1e-65]} {RNA1509_56137} {RNA1310_27875, RNA1509_56137} {RNA1509_56137, RNA815_15318}
2.	MligTC455_22325	293	6.1	Mlig455_007051	Neo: - Age: -		1.793	-	-	-	-	0.951	0.842	Mlig455_007051 {REF} {Length: 1749} {TRANSSPLICED} {RNA1509_22840} {RNA1310_17288} {RNA815_6634}
3.	MligTC455_42425	816	17.01	Mlig455_014864, Mlig455_014905	Neo: - Age: Down-Up-Down	PPM1E	0.954	-	-	-	-	-	0.954	Mlig455_014864 {REF} {Length: 2297} {TRANSSPLICED} {Pfam: Protein phosphatase 2C [PF00481.23, score=146.5]; Protein phosphatase 2C [PF13672.8, score=29.5]; Stage II sporulation protein E (SpoIIE) [PF07228.14, score=20.7]} {Human: ENSG00000175175, PPM1E, protein phosphatase, Mg2+/Mn2+ dependent 1E, [Score=113, Expect=2e-26]} {Mouse: ENSMUSG00000046442, Ppm1e, protein phosphatase 1E (PP2C domain containing), [Score=114, Expect=1e-26]} {Dmel: FBgn0032702, CG10376, [RH, Score=125, Expect=2e-31]} {Celegans: WBGene00001412, fem-2, Ca(2+)/calmodulin-dependent protein kinase phosphatase, [RH, Score=107, Expect=3e-25]} {Smed: dd_Smed_v6_4958_0_1, dd_Smed_v6_4958_0_1, [RH, Score=117, Expect=2e-28]} {RNA1509_58149} {RNA1310_10200, RNA1509_58149} {RNA1509_58149, RNA815_4689.1} Mlig455_014905 {REF} {Length: 2611} {TRANSSPLICED} {Pfam: Protein phosphatase 2C [PF00481.23, score=146.3]; Protein phosphatase 2C [PF13672.8, score=29.6]; Stage II sporulation protein E (SpoIIE) [PF07228.14, score=20.9]} {Human: ENSG00000175175, PPM1E, protein phosphatase, Mg2+/Mn2+ dependent 1E, [Score=113, Expect=2e-26]} {Mouse: ENSMUSG00000046442, Ppm1e, protein phosphatase 1E (PP2C domain containing), [Score=114, Expect=1e-26]} {Dmel: FBgn0032702, CG10376, [RH, Score=125, Expect=2e-31]} {Celegans: WBGene00001412, fem-2, Ca(2+)/calmodulin-dependent protein kinase phosphatase, [RH, Score=107, Expect=4e-25]} {Smed: dd_Smed_v6_4958_0_1, dd_Smed_v6_4958_0_1, [RH, Score=117, Expect=2e-28]} {RNA1509_15705} {RNA1310_7889, RNA1509_15705} {RNA1509_15705, RNA815_4689.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_44745

472

9.84

Mlig455_000621

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.487

EMC4

1.000

MligTC455_22325

293

6.1

Mlig455_007051

Neo: -

Age: -

1.793

0.951

0.842

Mlig455_007051 {REF} {Length: 1749} {TRANSSPLICED} {RNA1509_22840} {RNA1310_17288} {RNA815_6634}

MligTC455_42425

816

17.01

Mlig455_014864, Mlig455_014905

Neo: -

Age: Down-Up-Down

PPM1E

0.954

Mlig455_014864 {REF} {Length: 2297} {TRANSSPLICED} {Pfam: Protein phosphatase 2C [PF00481.23, score=146.5]; Protein phosphatase 2C [PF13672.8, score=29.5]; Stage II sporulation protein E (SpoIIE) [PF07228.14, score=20.7]} {Human: ENSG00000175175, PPM1E, protein phosphatase, Mg2+/Mn2+ dependent 1E, [Score=113, Expect=2e-26]} {Mouse: ENSMUSG00000046442, Ppm1e, protein phosphatase 1E (PP2C domain containing), [Score=114, Expect=1e-26]} {Dmel: FBgn0032702, CG10376, [RH, Score=125, Expect=2e-31]} {Celegans: WBGene00001412, fem-2, Ca(2+)/calmodulin-dependent protein kinase phosphatase, [RH, Score=107, Expect=3e-25]} {Smed: dd_Smed_v6_4958_0_1, dd_Smed_v6_4958_0_1, [RH, Score=117, Expect=2e-28]} {RNA1509_58149} {RNA1310_10200, RNA1509_58149} {RNA1509_58149, RNA815_4689.1}

Mlig455_014905 {REF} {Length: 2611} {TRANSSPLICED} {Pfam: Protein phosphatase 2C [PF00481.23, score=146.3]; Protein phosphatase 2C [PF13672.8, score=29.6]; Stage II sporulation protein E (SpoIIE) [PF07228.14, score=20.9]} {Human: ENSG00000175175, PPM1E, protein phosphatase, Mg2+/Mn2+ dependent 1E, [Score=113, Expect=2e-26]} {Mouse: ENSMUSG00000046442, Ppm1e, protein phosphatase 1E (PP2C domain containing), [Score=114, Expect=1e-26]} {Dmel: FBgn0032702, CG10376, [RH, Score=125, Expect=2e-31]} {Celegans: WBGene00001412, fem-2, Ca(2+)/calmodulin-dependent protein kinase phosphatase, [RH, Score=107, Expect=4e-25]} {Smed: dd_Smed_v6_4958_0_1, dd_Smed_v6_4958_0_1, [RH, Score=117, Expect=2e-28]} {RNA1509_15705} {RNA1310_7889, RNA1509_15705} {RNA1509_15705, RNA815_4689.1}