TomoSeq data search

Data search

Results for MligTC455_44803

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_44803

101

2.11

Mlig455_050814

Neo: Int S/G2/M

Age: -

Region-enriched R4: 4.233/0.00686
Region-enriched R5: 3.471/0.00398

SRP68

Mlig455_050814 {REF} {Length: 3388} {Pfam: RNA-binding signal recognition particle 68 [PF16969.7, score=315.6]} {Human: ENSG00000167881, SRP68, signal recognition particle 68, [RH, Score=331, Expect=2e-105]} {Mouse: ENSMUSG00000020780, Srp68, signal recognition particle 68, [RH, Score=331, Expect=1e-105]} {Dmel: FBgn0035947, Srp68, Signal recognition particle protein 68, [RH, Score=313, Expect=2e-99]} {Celegans: WBGene00010097, srpa-68, Probable signal recognition particle subunit SRP68, [RH, Score=224, Expect=1e-65]} {Smed: dd_Smed_v6_2240_0_2, dd_Smed_v6_2240_0_2, [RH, Score=281, Expect=4e-87]} {RNA1509_32225, RNA1509_35353, RNA1509_8102} {RNA1310_14683.1, RNA1509_32225, RNA1509_35353, RNA1509_8102} {RNA1509_32225, RNA1509_35353, RNA1509_8102, RNA815_4548}

Cumulative graph for MligTC455_44803

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.851	2.013	0.99968	1.00000
RegionR2	-0.54	2.013	0.87520	1.00000
RegionR3	1.102	2.013	0.37415	0.90820
RegionR4	4.233	2.013	0.00059	0.00686
RegionR5	3.471	2.013	0.00030	0.00398
RegionR6	1.451	2.013	0.26263	0.85054
RegionR7	0.314	2.013	0.70511	1.00000
RegionR8	-4.181	2.013	0.99986	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.337	2.013	0.99957	1.00000
RegenerationR2	1.098	2.013	0.15441	0.59005
RegenerationR3	-0.112	2.013	0.90447	1.00000
RegenerationR4	-0.787	2.013	0.38850	0.80645
RegenerationR5	-1.04	2.013	0.17045	0.59838
RegenerationR6	1.035	2.013	0.27591	0.62492
RegenerationBL	0.947	2.013	0.55117	0.90799
RegenerationTP	2.204	2.013	0.31443	0.75942

Genes with expression patterns similar to MligTC455_44803

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_44803	101	2.11	Mlig455_050814	Neo: Int S/G2/M Age: - Region-enriched R4: 4.233/0.00686 Region-enriched R5: 3.471/0.00398	SRP68	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_050814 {REF} {Length: 3388} {Pfam: RNA-binding signal recognition particle 68 [PF16969.7, score=315.6]} {Human: ENSG00000167881, SRP68, signal recognition particle 68, [RH, Score=331, Expect=2e-105]} {Mouse: ENSMUSG00000020780, Srp68, signal recognition particle 68, [RH, Score=331, Expect=1e-105]} {Dmel: FBgn0035947, Srp68, Signal recognition particle protein 68, [RH, Score=313, Expect=2e-99]} {Celegans: WBGene00010097, srpa-68, Probable signal recognition particle subunit SRP68, [RH, Score=224, Expect=1e-65]} {Smed: dd_Smed_v6_2240_0_2, dd_Smed_v6_2240_0_2, [RH, Score=281, Expect=4e-87]} {RNA1509_32225, RNA1509_35353, RNA1509_8102} {RNA1310_14683.1, RNA1509_32225, RNA1509_35353, RNA1509_8102} {RNA1509_32225, RNA1509_35353, RNA1509_8102, RNA815_4548}
2.	MligTC455_26879	23	0.47	Mlig455_066478	Neo: - Age: logFC(26M/2M)=0.844		0.963	-	-	-	-	-	0.963	Mlig455_066478 {REF} {Length: 3163} {RNA1509_57950} {RNA1310_7750.1} {RNA815_1043.2}
3.	MligTC455_52852	74	1.54	Mlig455_047254	Neo: - Age: -		0.963	-	-	-	-	-	0.963	Mlig455_047254 {REF} {Length: 1906} {RNA1509_33946} {RNA1310_76051, RNA1509_33946} {RNA1509_33946, RNA815_43371}
4.	MligTC455_52494	100	2.08	Mlig455_013751	Neo: - Age: - Region-enriched R6: 6.660/0.00069	BEST4	0.959	-	-	-	-	0.959	-	Mlig455_013751 {REF} {Length: 1713} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=176.9]} {Human: ENSG00000142959, BEST4, bestrophin 4, [Score=187, Expect=2e-53]} {Mouse: ENSMUSG00000037418, Best1, bestrophin 1, [Score=181, Expect=2e-50]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=198, Expect=6e-56]} {Celegans: WBGene00022797, best-24, Bestrophin homolog 24, [Score=168, Expect=1e-45]} {Smed: dd_Smed_v6_22175_0_4, dd_Smed_v6_22175_0_4, [Score=295, Expect=7e-95]} {RNA1310_16906} {RNA815_14720}
5.	MligTC455_32066	127	2.64	Mlig455_048493	Neo: - Age: Up-Down-Down	SLC17A9	0.958	-	-	-	-	-	0.958	Mlig455_048493 {REF} {Length: 5594} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=149.1]} {Human: ENSG00000101194, SLC17A9, solute carrier family 17 member 9, [RH, Score=303, Expect=1e-97]} {Mouse: ENSMUSG00000023393, Slc17a9, solute carrier family 17, member 9, [RH, Score=301, Expect=4e-97]} {Dmel: FBgn0025684, MFS18, Major Facilitator Superfamily Transporter 18, [Score=300, Expect=1e-96]} {Celegans: WBGene00010758, vnut-1, Vesicular NUcleotide Transporte, [RH, Score=313, Expect=5e-102]} {Smed: dd_Smed_v6_1326_0_1, dd_Smed_v6_1326_0_1, [Score=394, Expect=3e-133]} {RNA1509_17119} {RNA1310_13718, RNA1509_17119} {RNA1509_17119, RNA815_7003}
6.	MligTC455_18593	342	7.12	Mlig455_031208	Neo: - Age: Down-Up-Up	ETFBKMT	0.955	-	-	-	-	-	0.955	Mlig455_031208 {REF} {Length: 992} {TRANSSPLICED} {Pfam: Ribosomal protein L11 methyltransferase (PrmA) [PF06325.15, score=41.4]; Methyltransferase small domain [PF05175.16, score=33.6]; Lysine methyltransferase [PF10294.11, score=30.5]; Methyltransferase domain [PF13649.8, score=19.9]; Conserved hypothetical protein 95 [PF03602.17, score=19.5]} {Human: ENSG00000139160, ETFBKMT, electron transfer flavoprotein subunit beta lysine methyltransferase, [RH, Score=138, Expect=5e-39]} {Mouse: ENSMUSG00000039958, Etfbkmt, electron transfer flavoprotein beta subunit lysine methyltransferase, [RH, Score=139, Expect=1e-39]} {Celegans: WBGene00016492, C37A2.6, Electron transfer flavoprotein beta subunit lysine methyltransferase homolog, [RH, Score=129, Expect=7e-36]} {RNA1509_21581} {RNA1310_32903, RNA1509_21581} {RNA1509_21581, RNA815_16606}

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