Data search


search
Exact
Search

Results for MligTC455_44825

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_44825 885 18.43 Mlig455_026887

Neo: -

Age: logFC(26M/2M)=-0.194

Region-enriched R4: 1.437/0.04967

RANBP9 Mlig455_026887 {REF} {Length: 2711} {Pfam: CTLH/CRA C-terminal to LisH motif domain [PF10607.11, score=104.3]; SPRY domain [PF00622.30, score=74.8]} {Human: ENSG00000010017, RANBP9, RAN binding protein 9, [RH, Score=309, Expect=2e-97]; ENSG00000141084, RANBP10, RAN binding protein 10, [RH, Score=298, Expect=6e-94]} {Mouse: ENSMUSG00000038546, Ranbp9, RAN binding protein 9, [RH, Score=309, Expect=1e-97]; ENSMUSG00000037415, Ranbp10, RAN binding protein 10, [RH, Score=296, Expect=2e-93]} {Dmel: FBgn0262114, RanBPM, Ran-binding protein M, [RH, Score=258, Expect=6e-76]} {Celegans: WBGene00013202, Y54E5A.7, [RH, Score=172, Expect=4e-47]} {Smed: dd_Smed_v6_8225_0_1, dd_Smed_v6_8225_0_1, [RH, Score=113, Expect=8e-27]} {RNA1509_14565, RNA1509_8634} {RNA1310_7699.1, RNA1509_14565} {RNA1509_14565, RNA815_7119}

Cumulative graph for MligTC455_44825

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.386 4.484 0.30574 0.95476
RegionR2 -0.332 4.484 0.54271 0.90971
RegionR3 0.524 4.484 0.23426 0.77601
RegionR4 1.437 4.484 0.00760 0.04967
RegionR5 0.743 4.484 0.07105 0.24080
RegionR6 0.227 4.484 0.60594 1.00000
RegionR7 -0.133 4.484 0.81043 1.00000
RegionR8 -1.08 4.484 0.14432 0.69336

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.503 4.484 0.35627 1.00000
RegenerationR2 0.083 4.484 0.85861 1.00000
RegenerationR3 -0.536 4.484 0.27060 0.70480
RegenerationR4 -0.516 4.484 0.31809 0.75655
RegenerationR5 -0.19 4.484 0.68918 0.94761
RegenerationR6 0.3 4.484 0.55293 0.84080
RegenerationBL -0.491 4.484 0.42130 0.78950
RegenerationTP 0.881 4.484 0.14133 0.56052


Genes with expression patterns similar to MligTC455_44825

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_44825 885 18.43 Mlig455_026887

Neo: -

Age: logFC(26M/2M)=-0.194

Region-enriched R4: 1.437/0.04967

RANBP9 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_026887 {REF} {Length: 2711} {Pfam: CTLH/CRA C-terminal to LisH motif domain [PF10607.11, score=104.3]; SPRY domain [PF00622.30, score=74.8]} {Human: ENSG00000010017, RANBP9, RAN binding protein 9, [RH, Score=309, Expect=2e-97]; ENSG00000141084, RANBP10, RAN binding protein 10, [RH, Score=298, Expect=6e-94]} {Mouse: ENSMUSG00000038546, Ranbp9, RAN binding protein 9, [RH, Score=309, Expect=1e-97]; ENSMUSG00000037415, Ranbp10, RAN binding protein 10, [RH, Score=296, Expect=2e-93]} {Dmel: FBgn0262114, RanBPM, Ran-binding protein M, [RH, Score=258, Expect=6e-76]} {Celegans: WBGene00013202, Y54E5A.7, [RH, Score=172, Expect=4e-47]} {Smed: dd_Smed_v6_8225_0_1, dd_Smed_v6_8225_0_1, [RH, Score=113, Expect=8e-27]} {RNA1509_14565, RNA1509_8634} {RNA1310_7699.1, RNA1509_14565} {RNA1509_14565, RNA815_7119}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA