Data search
Results for MligTC455_44877
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_44877 | 866 | 18.03 | Mlig455_049762 | Neo: - Age: logFC(26M/2M)=-0.245 |
GP5 | Mlig455_049762 {REF} {Length: 3949} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=77.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=27.4]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=26.3]} {Human: ENSG00000178732, GP5, glycoprotein V platelet, [Score=80.1, Expect=7e-15]; ENSG00000178772, CPN2, carboxypeptidase N subunit 2, [Score=78.2, Expect=3e-14]} {Mouse: ENSMUSG00000023176, Cpn2, carboxypeptidase N, polypeptide 2, [Score=94.0, Expect=2e-19]} {Dmel: FBgn0023095, caps, capricious, [Score=81.3, Expect=2e-15]} {Celegans: WBGene00016974, lron-15, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=66.6, Expect=6e-11]} {Smed: dd_Smed_v6_13247_0_1, dd_Smed_v6_13247_0_1, [Score=65.1, Expect=1e-10]} {RNA1509_9490} {RNA1310_3699, RNA1509_9490} {RNA1509_9490, RNA815_1699} |
Cumulative graph for MligTC455_44877
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.19 | 4.369 | 0.84030 | 1.00000 | |
| RegionR2 | 0.342 | 4.369 | 0.43400 | 0.82409 | |
| RegionR3 | -0.514 | 4.369 | 0.17837 | 0.70775 | |
| RegionR4 | -0.495 | 4.369 | 0.25130 | 0.55089 | |
| RegionR5 | -0.45 | 4.369 | 0.20105 | 0.49189 | |
| RegionR6 | 0.64 | 4.369 | 0.06695 | 0.48342 | |
| RegionR7 | -0.371 | 4.369 | 0.46036 | 1.00000 | |
| RegionR8 | 1.038 | 4.369 | 0.05013 | 0.43933 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.171 | 4.369 | 0.88704 | 1.00000 | |
| RegenerationR2 | -0.081 | 4.369 | 0.83112 | 0.99827 | |
| RegenerationR3 | 0.337 | 4.369 | 0.43497 | 0.82407 | |
| RegenerationR4 | 0.088 | 4.369 | 0.83789 | 1.00000 | |
| RegenerationR5 | 0.197 | 4.369 | 0.62966 | 0.92240 | |
| RegenerationR6 | -0.172 | 4.369 | 0.67332 | 0.91018 | |
| RegenerationBL | -1.371 | 4.369 | 0.01218 | 0.11290 | |
| RegenerationTP | -0.466 | 4.369 | 0.37817 | 0.81333 |
Genes with expression patterns similar to MligTC455_44877
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_44877 | 866 | 18.03 | Mlig455_049762 | Neo: - Age: logFC(26M/2M)=-0.245 |
GP5 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_049762 {REF} {Length: 3949} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=77.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=27.4]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=26.3]} {Human: ENSG00000178732, GP5, glycoprotein V platelet, [Score=80.1, Expect=7e-15]; ENSG00000178772, CPN2, carboxypeptidase N subunit 2, [Score=78.2, Expect=3e-14]} {Mouse: ENSMUSG00000023176, Cpn2, carboxypeptidase N, polypeptide 2, [Score=94.0, Expect=2e-19]} {Dmel: FBgn0023095, caps, capricious, [Score=81.3, Expect=2e-15]} {Celegans: WBGene00016974, lron-15, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=66.6, Expect=6e-11]} {Smed: dd_Smed_v6_13247_0_1, dd_Smed_v6_13247_0_1, [Score=65.1, Expect=1e-10]} {RNA1509_9490} {RNA1310_3699, RNA1509_9490} {RNA1509_9490, RNA815_1699} |
| 2. | MligTC455_13273 | 193 | 4.03 | Mlig455_036464 | Neo: - Age: - |
1.808 | 0.950 | 0.858 | - | - | - | - | Mlig455_036464 {REF} {Length: 1541} {Pfam: EGF-like domain [PF00008.29, score=21.0]} {RNA1509_22753} {RNA1310_46979, RNA1509_22753} {RNA1509_22753, RNA815_24670} | |
| 3. | MligTC455_35220 | 430 | 8.96 | Mlig455_057315 | Neo: - Age: - |
0.984 | - | - | - | 0.984 | - | - | Mlig455_057315 {REF} {Length: 2102} {TRANSSPLICED} {RNA1509_28464} {RNA1310_5172} {RNA815_3315} | |
| 4. | MligTC455_44634 | 348 | 7.26 | Mlig455_034481 | Neo: - Age: Down-Up-Down |
CCDC89 | 0.981 | - | - | - | 0.981 | - | - | Mlig455_034481 {REF} {Length: 2130} {TRANSSPLICED} {Human: ENSG00000179071, CCDC89, coiled-coil domain containing 89, [RH, Score=120, Expect=2e-30]} {Mouse: ENSMUSG00000044362, Ccdc89, coiled-coil domain containing 89, [RH, Score=119, Expect=4e-30]} {Smed: dd_Smed_v6_41_2_1, dd_Smed_v6_41_2_1, [RH, Score=67.8, Expect=9e-14]} {RNA1509_12755, RNA1509_37757} {RNA1310_8733, RNA1509_37757} {RNA1509_37757, RNA815_8009.1} |
| 5. | MligTC455_48482 | 1386 | 28.87 | Mlig455_054299 | Neo: - Age: logFC(26M/2M)=-0.293 |
NKAIN1 | 0.972 | - | - | - | 0.972 | - | - | Mlig455_054299 {REF} {Length: 2941} {Pfam: Na,K-Atpase Interacting protein [PF05640.16, score=100.0]} {Human: ENSG00000084628, NKAIN1, sodium/potassium transporting ATPase interacting 1, [RH, Score=87.4, Expect=4e-19]} {Mouse: ENSMUSG00000078532, Nkain1, Na+/K+ transporting ATPase interacting 1, [RH, Score=72.4, Expect=5e-14]; ENSMUSG00000106964, FO907130.1, Na+/K+ transporting ATPase interacting 1, [RH, Score=71.6, Expect=8e-14]} {Dmel: FBgn0085442, NKAIN, Na,K-ATPase Interacting, [RH, Score=103, Expect=9e-23]} {RNA1509_12519, RNA1509_26486, RNA1509_49909} {RNA1310_6039, RNA1509_12519, RNA1509_26486, RNA1509_49909} {RNA1509_12519, RNA1509_26486, RNA1509_49909, RNA815_18778} |
| 6. | MligTC455_53257 | 187 | 3.9 | Mlig455_018115 | Neo: - Age: - |
BSG | 0.955 | 0.955 | - | - | - | - | - | Mlig455_018115 {REF} {Length: 2576} {Pfam: Immunoglobulin domain [PF13927.8, score=32.6]; Immunoglobulin I-set domain [PF07679.18, score=26.7]; Immunoglobulin domain [PF13895.8, score=25.2]; Immunoglobulin domain [PF00047.27, score=20.7]} {Human: ENSG00000172270, BSG, basigin (Ok blood group), [Score=50.1, Expect=2e-06]} {Mouse: ENSMUSG00000023175, Bsg, basigin, [Score=55.8, Expect=2e-08]} {RNA1509_32620} {RNA1310_13060.2, RNA1509_32620} {RNA1509_32620, RNA815_13381} |
| 7. | MligTC455_30514 | 139 | 2.9 | Mlig455_032043 | Neo: - Age: - |
ABCC1 | 0.954 | 0.954 | - | - | - | - | - | Mlig455_032043 {REF} {Length: 2982} {Pfam: ABC transporter transmembrane region [PF00664.25, score=133.3]; ABC transporter [PF00005.29, score=128.1]; RecF/RecN/SMC N terminal domain [PF02463.21, score=22.9]} {Human: ENSG00000278183, ABCC1, ATP binding cassette subfamily C member 1, [Score=715, Expect=0.0]; ENSG00000103222, ABCC1, ATP binding cassette subfamily C member 1, [Score=715, Expect=0.0]; ENSG00000023839, ABCC2, ATP binding cassette subfamily C member 2, [Score=712, Expect=0.0]; ENSG00000108846, ABCC3, ATP binding cassette subfamily C member 3, [Score=690, Expect=0.0]} {Mouse: ENSMUSG00000023088, Abcc1, ATP-binding cassette, sub-family C (CFTR/MRP), member 1, [Score=725, Expect=0.0]; ENSMUSG00000020865, Abcc3, ATP-binding cassette, sub-family C (CFTR/MRP), member 3, [Score=717, Expect=0.0]} {Dmel: FBgn0032456, MRP, Multidrug-Resistance like Protein 1, [Score=726, Expect=0.0]} {Celegans: WBGene00003413, mrp-7, [Score=637, Expect=0.0]} {Smed: dd_Smed_v6_3982_0_1, dd_Smed_v6_3982_0_1, [Score=687, Expect=0.0]} {RNA1509_55953} {RNA1310_11018.1} {RNA815_25227} |
| 8. | MligTC455_37422 | 424 | 8.84 | Mlig455_046336, Mlig455_068232 | Neo: - Age: - |
0.953 | 0.953 | - | - | - | - | - | Mlig455_046336 {REF} {Length: 2188} {RNA1509_23270, RNA1509_23548} {RNA1310_21891, RNA1509_23270, RNA1509_23548} {RNA1509_23270, RNA1509_23548, RNA815_2813.1} Mlig455_068232 {REF} {Length: 2388} {RNA1509_23548} {RNA1310_21891} {RNA815_2813.1} |
Berezikov Lab - 2020-2021 © ERIBA