Data search
Results for MligTC455_44934
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_44934 | 555 | 11.56 | Mlig455_024067 | Neo: - |
IFT81 | Mlig455_024067 {REF} {Length: 2467} {TRANSSPLICED} {Pfam: Intraflagellar transport 81 calponin homology domain [PF18383.3, score=163.9]; Crescentin protein [PF19220.2, score=19.9]} {Human: ENSG00000122970, IFT81, intraflagellar transport 81, [RH, Score=628, Expect=0.0]} {Mouse: ENSMUSG00000029469, Ift81, intraflagellar transport 81, [RH, Score=645, Expect=0.0]} {Celegans: WBGene00017973, ift-81, IFT (Chlamydomonas IntraFlagellar Transport) homolog, [RH, Score=242, Expect=1e-70]} {Smed: dd_Smed_v6_8803_0_1, dd_Smed_v6_8803_0_1, [RH, Score=622, Expect=0.0]} {RNA1509_5623} {RNA1310_8965, RNA1509_5623} {RNA1509_5623, RNA815_2949} |
Cumulative graph for MligTC455_44934
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.18 | 3.89 | 0.90435 | 1.00000 | |
| RegionR2 | -0.147 | 3.89 | 0.78546 | 1.00000 | |
| RegionR3 | -0.146 | 3.89 | 0.74834 | 1.00000 | |
| RegionR4 | 0.993 | 3.89 | 0.06895 | 0.23966 | |
| RegionR5 | -0.085 | 3.89 | 0.84898 | 1.00000 | |
| RegionR6 | -1.227 | 3.89 | 0.02138 | 0.26451 | |
| RegionR7 | -0.084 | 3.89 | 0.88689 | 1.00000 | |
| RegionR8 | 0.876 | 3.89 | 0.18292 | 0.76923 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.76 | 3.89 | 0.16449 | 0.90686 | |
| RegenerationR2 | 0.027 | 3.89 | 0.95305 | 1.00000 | |
| RegenerationR3 | -0.407 | 3.89 | 0.42518 | 0.81828 | |
| RegenerationR4 | -0.542 | 3.89 | 0.29212 | 0.73568 | |
| RegenerationR5 | -0.011 | 3.89 | 0.97809 | 1.00000 | |
| RegenerationR6 | 0.733 | 3.89 | 0.18360 | 0.51921 | |
| RegenerationBL | 0.263 | 3.89 | 0.63636 | 0.97588 | |
| RegenerationTP | -1.752 | 3.89 | 0.01210 | 0.18688 |
Genes with expression patterns similar to MligTC455_44934
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_44934 | 555 | 11.56 | Mlig455_024067 | Neo: - |
IFT81 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_024067 {REF} {Length: 2467} {TRANSSPLICED} {Pfam: Intraflagellar transport 81 calponin homology domain [PF18383.3, score=163.9]; Crescentin protein [PF19220.2, score=19.9]} {Human: ENSG00000122970, IFT81, intraflagellar transport 81, [RH, Score=628, Expect=0.0]} {Mouse: ENSMUSG00000029469, Ift81, intraflagellar transport 81, [RH, Score=645, Expect=0.0]} {Celegans: WBGene00017973, ift-81, IFT (Chlamydomonas IntraFlagellar Transport) homolog, [RH, Score=242, Expect=1e-70]} {Smed: dd_Smed_v6_8803_0_1, dd_Smed_v6_8803_0_1, [RH, Score=622, Expect=0.0]} {RNA1509_5623} {RNA1310_8965, RNA1509_5623} {RNA1509_5623, RNA815_2949} |
| 2. | MligTC455_29437 | 897 | 18.69 | Mlig455_049319, Mlig455_049403 | Neo: - Age: - Region-enriched R8: 2.720/0.00033 Regeneration-depleted TP: -2.721 |
PKDREJ | 1.698 | - | - | - | 0.747 | 0.951 | - | Mlig455_049319 {REF} {Length: 10561} {Pfam: Polycystin cation channel [PF08016.14, score=289.6]; PLAT/LH2 domain [PF01477.25, score=81.7]; Ion transport protein [PF00520.33, score=61.2]} {Human: ENSG00000130943, PKDREJ, polycystin family receptor for egg jelly, [Score=294, Expect=1e-81]} {Mouse: ENSMUSG00000052496, Pkdrej, polycystin (PKD) family receptor for egg jelly, [Score=266, Expect=1e-72]} {Dmel: FBgn0041195, Pkd2, Polycystic kidney disease 2, [Score=137, Expect=9e-33]} {Celegans: WBGene00004035, pkd-2, Polycystin-2, [Score=156, Expect=3e-39]} {Smed: dd_Smed_v6_15525_0_2, dd_Smed_v6_15525_0_2, [Score=445, Expect=1e-132]} {RNA1509_2125} {RNA1310_81.1} {RNA815_193} Mlig455_049403 {REF} {Length: 11572} {Pfam: Polycystin cation channel [PF08016.14, score=288.0]; PLAT/LH2 domain [PF01477.25, score=80.0]; Ion transport protein [PF00520.33, score=59.0]; PKD domain [PF18911.2, score=38.5]; PKD domain [PF00801.22, score=23.6]} {Human: ENSG00000130943, PKDREJ, polycystin family receptor for egg jelly, [Score=286, Expect=2e-76]} {Mouse: ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [Score=271, Expect=7e-72]} {Dmel: FBgn0041195, Pkd2, Polycystic kidney disease 2, [Score=142, Expect=2e-33]} {Celegans: WBGene00004035, pkd-2, Polycystin-2, [Score=150, Expect=1e-36]} {Smed: dd_Smed_v6_15525_0_2, dd_Smed_v6_15525_0_2, [Score=486, Expect=6e-138]} {RNA1509_2125} {RNA1310_81.1} {RNA815_193} |
| 3. | MligTC455_40542 | 602 | 12.53 | Mlig455_069897 | Neo: - Age: Up-Down-Up |
UBE3C | 0.981 | - | - | - | - | 0.981 | - | Mlig455_069897 {REF} {Length: 4281} {TRANSSPLICED} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=262.5]} {Human: ENSG00000009335, UBE3C, ubiquitin protein ligase E3C, [RH, Score=365, Expect=9e-109]} {Mouse: ENSMUSG00000039000, Ube3c, ubiquitin protein ligase E3C, [RH, Score=363, Expect=3e-108]} {Dmel: FBgn0034989, CG3356, [RH, Score=352, Expect=4e-104]} {Celegans: WBGene00008429, etc-1, E3 ubiquitin-protein ligase etc-1, [RH, Score=254, Expect=2e-70]} {Smed: dd_Smed_v6_8915_0_1, dd_Smed_v6_8915_0_1, [RH, Score=319, Expect=9e-93]} {RNA1509_52489, RNA1509_7273} {RNA1310_2336, RNA1509_52489} {RNA1509_52489, RNA815_688.1} |
| 4. | MligTC455_38224 | 1520 | 31.66 | Mlig455_039394 | Neo: - Age: - |
TRAF5 | 0.975 | - | - | - | - | 0.975 | - | Mlig455_039394 {REF} {Length: 4815} {TRANSSPLICED} {Pfam: TRAF-type zinc finger [PF02176.20, score=42.2]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=30.1]; Ring finger domain [PF13639.8, score=23.6]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=20.0]; zinc-RING finger domain [PF14634.8, score=19.1]} {Human: ENSG00000082512, TRAF5, TNF receptor associated factor 5, [Score=82.8, Expect=1e-16]} {Mouse: ENSMUSG00000027164, Traf6, TNF receptor-associated factor 6, [Score=81.6, Expect=2e-16]; ENSMUSG00000026637, Traf5, TNF receptor-associated factor 5, [Score=80.1, Expect=6e-16]; ENSMUSG00000111385, Traf5, TNF receptor-associated factor 5, [Score=80.1, Expect=6e-16]} {Smed: dd_Smed_v6_13517_0_1, dd_Smed_v6_13517_0_1, [Score=59.7, Expect=1e-09]} {RNA1509_14281, RNA1509_15028, RNA1509_18076, RNA1509_22850, RNA1509_27625, RNA1509_32307, RNA1509_35793} {RNA1310_4898, RNA1509_14281, RNA1509_15028, RNA1509_18076, RNA1509_22850, RNA1509_27625, RNA1509_32307, RNA1509_35793} {RNA1509_14281, RNA1509_15028, RNA1509_18076, RNA1509_22850, RNA1509_27625, RNA1509_32307, RNA1509_35793, RNA815_100} |
| 5. | MligTC455_51180 | 590 | 12.29 | Mlig455_012498, Mlig455_012587 | Neo: - Age: - |
0.964 | - | - | - | 0.964 | - | - | Mlig455_012498 {REF} {Length: 3214} {TRANSSPLICED} {Pfam: RUN domain [PF02759.21, score=55.2]} {Smed: dd_Smed_v6_12193_0_1, dd_Smed_v6_12193_0_1, [RH, Score=58.2, Expect=1e-08]} {RNA1509_18736} {RNA1310_14745, RNA1509_18736} {RNA1509_18736, RNA815_5188} Mlig455_012587 {REF} {Length: 3216} {TRANSSPLICED} {Pfam: RUN domain [PF02759.21, score=52.3]} {Smed: dd_Smed_v6_6417_0_1, dd_Smed_v6_6417_0_1, [RH, Score=52.8, Expect=4e-07]} {RNA1509_18736} {RNA1310_14745} {RNA815_5188} |
|
| 6. | MligTC455_20186 | 463 | 9.65 | Mlig455_056751 | Neo: - Age: - |
TMEM132D | 0.96 | - | - | - | - | 0.960 | - | Mlig455_056751 {REF} {Length: 7153} {TRANSSPLICED} {Pfam: Transmembrane protein family 132 [PF16070.7, score=153.8]; Mature oligodendrocyte transmembrane protein, TMEM132D, C-term [PF15706.7, score=46.0]} {Human: ENSG00000151952, TMEM132D, transmembrane protein 132D, [Score=122, Expect=2e-27]} {Mouse: ENSMUSG00000034310, Tmem132d, transmembrane protein 132D, [Score=128, Expect=2e-29]} {Celegans: WBGene00022175, Y71H2AM.10, [RH, Score=96.3, Expect=7e-20]} {RNA1509_10814} {RNA1310_5791.1, RNA1509_10814} {RNA1509_10814, RNA815_6547} |
| 7. | MligTC455_25019 | 1114 | 23.2 | Mlig455_008177 | Neo: - Age: Up-Down-Down Region-enriched R4: 1.470/0.00387 |
ELF2 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_008177 {REF} {Length: 2355} {Pfam: Ets-domain [PF00178.24, score=110.0]} {Human: ENSG00000109381, ELF2, E74 like ETS transcription factor 2, [RH, Score=158, Expect=2e-42]} {Mouse: ENSMUSG00000037174, Elf2, E74-like factor 2, [RH, Score=157, Expect=2e-42]} {Dmel: FBgn0000567, Eip74EF, Ecdysone-induced protein 74EF, [RH, Score=161, Expect=2e-42]} {Celegans: WBGene00016029, elf-1, See eff, [RH, Score=155, Expect=1e-42]} {Smed: dd_Smed_v6_6626_0_1, dd_Smed_v6_6626_0_1, [RH, Score=116, Expect=1e-29]} {RNA1509_43190} {RNA1310_14984.1} {RNA815_3512.2} |
| 8. | MligTC455_42634 | 4044 | 84.26 | Mlig455_070344 | Neo: - Age: Down-Up-Down Regeneration-upregulated BL: 1.425 Regeneration-enriched BL: 1.425 |
ATP1A2 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_070344 {REF} {Length: 3621} {Pfam: E1-E2 ATPase [PF00122.22, score=151.4]; Cation transporting ATPase, C-terminus [PF00689.23, score=144.1]; Cation transport ATPase (P-type) [PF13246.8, score=78.1]; haloacid dehalogenase-like hydrolase [PF00702.28, score=72.7]; Cation transporter/ATPase, N-terminus [PF00690.28, score=59.0]; haloacid dehalogenase-like hydrolase [PF08282.14, score=25.8]} {Human: ENSG00000018625, ATP1A2, ATPase Na+/K+ transporting subunit alpha 2, [RH, Score=1508, Expect=0.0]; ENSG00000163399, ATP1A1, ATPase Na+/K+ transporting subunit alpha 1, [RH, Score=1505, Expect=0.0]; ENSG00000105409, ATP1A3, ATPase Na+/K+ transporting subunit alpha 3, [RH, Score=1497, Expect=0.0]; ENSG00000285505, AC010616.2, novel protein, ATP1A3-RABAC1 readthrough, [RH, Score=1483, Expect=0.0]} {Mouse: ENSMUSG00000007097, Atp1a2, ATPase, Na+/K+ transporting, alpha 2 polypeptide, [RH, Score=1502, Expect=0.0]; ENSMUSG00000040907, Atp1a3, ATPase, Na+/K+ transporting, alpha 3 polypeptide, [RH, Score=1495, Expect=0.0]; ENSMUSG00000033161, Atp1a1, ATPase, Na+/K+ transporting, alpha 1 polypeptide, [RH, Score=1491, Expect=0.0]} {Dmel: FBgn0002921, Atpalpha, Na pump alpha subunit, [RH, Score=1560, Expect=0.0]} {Celegans: WBGene00001137, eat-6, Sodium/potassium-transporting ATPase subunit alpha, [RH, Score=1483, Expect=0.0]} {Smed: dd_Smed_v6_1179_0_1, dd_Smed_v6_1179_0_1, [RH, Score=1654, Expect=0.0]} {RNA1509_990} {RNA1310_3228.1} {RNA815_592.2} |
| 9. | MligTC455_25020 | 1132 | 23.58 | Mlig455_008216 | Neo: - Age: - Region-enriched R4: 1.465/0.00326 |
TGM4 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_008216 {REF} {Length: 4880} {Pfam: Ets-domain [PF00178.24, score=108.6]; Transglutaminase-like superfamily [PF01841.21, score=54.5]; Transglutaminase family, C-terminal ig like domain [PF00927.24, score=38.0]} {Human: ENSG00000281886, TGM4, transglutaminase 4, [Score=334, Expect=8e-101]; ENSG00000163810, TGM4, transglutaminase 4, [Score=334, Expect=8e-101]} {Mouse: ENSMUSG00000025787, Tgm4, transglutaminase 4 (prostate), [Score=320, Expect=5e-96]; ENSMUSG00000027401, Tgm3, transglutaminase 3, E polypeptide, [Score=317, Expect=7e-95]} {Dmel: FBgn0031975, Tg, Transglutaminase, [Score=316, Expect=8e-94]} {Celegans: WBGene00016029, elf-1, See eff, [RH, Score=155, Expect=2e-40]} {Smed: dd_Smed_v6_6626_0_1, dd_Smed_v6_6626_0_1, [RH, Score=112, Expect=1e-27]} {RNA1509_43190} {RNA1310_14984.1} {RNA815_2840} |
| 10. | MligTC455_51142 | 651 | 13.56 | Mlig455_065080 | Neo: - Age: - |
0.95 | - | - | - | 0.950 | - | - | Mlig455_065080 {REF} {Length: 1039} {NoTransDecoderORF} {RNA1509_14530} {RNA1310_19556.1, RNA1509_14530} {RNA1509_14530, RNA815_17427} |
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