TomoSeq data search

Data search

Results for MligTC455_44964

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_44964

637

13.27

Mlig455_019157

Neo: -

Age: logFC(26M/2M)=2.209

Region-enriched R4: 1.367/0.02014

VCPKMT

Mlig455_019157 {REF} {Length: 859} {TRANSSPLICED} {Pfam: Lysine methyltransferase [PF10294.11, score=97.4]} {Human: ENSG00000100483, VCPKMT, valosin containing protein lysine methyltransferase, [Score=82.4, Expect=2e-18]} {Mouse: ENSMUSG00000049882, Vcpkmt, valosin containing protein lysine (K) methyltransferase, [Score=90.1, Expect=2e-21]} {Celegans: WBGene00016591, C42C1.13, Protein-lysine methyltransferase C42C1.13, [Score=94.4, Expect=1e-23]} {Smed: dd_Smed_v6_7520_0_1, dd_Smed_v6_7520_0_1, [Score=54.7, Expect=6e-09]} {RNA1509_32981} {RNA1310_31753} {RNA815_16503}

Cumulative graph for MligTC455_44964

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.109	4.118	0.10502	0.67973
RegionR2	0.359	4.118	0.48321	0.86686
RegionR3	0.381	4.118	0.37857	0.91133
RegionR4	1.367	4.118	0.00234	0.02014
RegionR5	0.295	4.118	0.47390	0.83675
RegionR6	0.801	4.118	0.05809	0.45136
RegionR7	0.265	4.118	0.61726	1.00000
RegionR8	-1.36	4.118	0.09388	0.57805

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.944	4.118	0.24587	0.96633
RegenerationR2	-0.216	4.118	0.59280	0.91238
RegenerationR3	0.009	4.118	0.98292	1.00000
RegenerationR4	-0.171	4.118	0.69867	0.95287
RegenerationR5	0.248	4.118	0.56188	0.89250
RegenerationR6	-0.27	4.118	0.54750	0.83773
RegenerationBL	-0.156	4.118	0.79025	1.00000
RegenerationTP	0.625	4.118	0.31859	0.76405

Genes with expression patterns similar to MligTC455_44964

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_44964	637	13.27	Mlig455_019157	Neo: - Age: logFC(26M/2M)=2.209 Region-enriched R4: 1.367/0.02014	VCPKMT	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_019157 {REF} {Length: 859} {TRANSSPLICED} {Pfam: Lysine methyltransferase [PF10294.11, score=97.4]} {Human: ENSG00000100483, VCPKMT, valosin containing protein lysine methyltransferase, [Score=82.4, Expect=2e-18]} {Mouse: ENSMUSG00000049882, Vcpkmt, valosin containing protein lysine (K) methyltransferase, [Score=90.1, Expect=2e-21]} {Celegans: WBGene00016591, C42C1.13, Protein-lysine methyltransferase C42C1.13, [Score=94.4, Expect=1e-23]} {Smed: dd_Smed_v6_7520_0_1, dd_Smed_v6_7520_0_1, [Score=54.7, Expect=6e-09]} {RNA1509_32981} {RNA1310_31753} {RNA815_16503}
2.	MligTC455_36611	250	5.21	Mlig455_063856	Neo: - Age: -		0.964	0.964	-	-	-	-	-	Mlig455_063856 {REF} {Length: 1172} {RNA1509_17799} {RNA1310_27750.1} {RNA815_14952}
3.	MligTC455_48507	330	6.88	Mlig455_030151	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.466	TMEM232	0.96	0.960	-	-	-	-	-	Mlig455_030151 {REF} {Length: 2337} {TRANSSPLICED} {Pfam: Transmembrane protein family 232 [PF15877.7, score=221.6]} {Human: ENSG00000186952, TMEM232, transmembrane protein 232, [Score=155, Expect=2e-39]} {Mouse: ENSMUSG00000045036, Tmem232, transmembrane protein 232, [Score=164, Expect=2e-42]} {Smed: dd_Smed_v6_15138_0_1, dd_Smed_v6_15138_0_1, [RH, Score=160, Expect=8e-42]} {RNA1509_11088} {RNA1310_8942.1} {RNA815_6522}
4.	MligTC455_06777	231	4.82	Mlig455_023671	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_023671 {REF} {Length: 172} {NoTransDecoderORF} {RNA1509_55482} {RNA1310_40337} {RNA815_17501}
5.	MligTC455_36610	382	7.95	Mlig455_038889, Mlig455_057428	Neo: - Age: logFC(26M/2M)=-0.955	PJA2	0.954	0.954	-	-	-	-	-	Mlig455_038889 {REF} {Length: 1874} {Pfam: Ring finger domain [PF13639.8, score=34.9]; RING-H2 zinc finger domain [PF12678.9, score=27.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.4]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=20.6]; zinc-RING finger domain [PF14634.8, score=18.8]; Rtf2 RING-finger [PF04641.14, score=18.0]} {Dmel: FBgn0034314, nopo, no poles, [Score=57.8, Expect=6e-10]} {RNA1509_17799} {RNA1310_27750.1} {RNA815_14952} Mlig455_057428 {REF} {Length: 1314} {Pfam: Ring finger domain [PF13639.8, score=38.2]; RING-H2 zinc finger domain [PF12678.9, score=30.1]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=25.4]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=20.6]; zinc-RING finger domain [PF14634.8, score=20.6]; Rtf2 RING-finger [PF04641.14, score=19.4]} {Human: ENSG00000198961, PJA2, praja ring finger ubiquitin ligase 2, [Score=46.2, Expect=1e-05]} {Mouse: ENSMUSG00000024083, Pja2, praja ring finger ubiquitin ligase 2, [Score=46.2, Expect=1e-05]} {Dmel: FBgn0034314, nopo, no poles, [Score=59.3, Expect=2e-10]} {RNA1509_17799} {RNA1310_27750.1, RNA1509_17799} {RNA1509_17799, RNA815_14952}
6.	MligTC455_11137	65	1.36	Mlig455_007742	Neo: - Age: -	FAT1	0.953	0.953	-	-	-	-	-	Mlig455_007742 {REF} {Length: 4301} {Pfam: Cadherin domain [PF00028.19, score=102.1]; EGF-like domain [PF00008.29, score=51.2]; Calcium-binding EGF domain [PF07645.17, score=33.3]} {Human: ENSG00000083857, FAT1, FAT atypical cadherin 1, [Score=207, Expect=2e-53]; ENSG00000165323, FAT3, FAT atypical cadherin 3, [Score=205, Expect=1e-52]; ENSG00000282908, FAT3, FAT atypical cadherin 3, [Score=205, Expect=1e-52]} {Mouse: ENSMUSG00000070047, Fat1, FAT atypical cadherin 1, [Score=212, Expect=5e-55]; ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=210, Expect=2e-54]} {Dmel: FBgn0261574, kug, kugelei, [Score=155, Expect=9e-38]} {Celegans: WBGene00000396, cdh-4, Cadherin-4, [Score=121, Expect=2e-27]} {Smed: dd_Smed_v6_7638_0_1, dd_Smed_v6_7638_0_1, [Score=161, Expect=1e-39]} {RNA1509_55673} {RNA1310_45646} {RNA815_38697}
7.	MligTC455_53955	385	8.01	Mlig455_016192	Neo: - Age: - Region-enriched R2: 2.185/0.00203	TMEM216	0.953	0.953	-	-	-	-	-	Mlig455_016192 {REF} {Length: 1165} {TRANSSPLICED} {Pfam: Predicted membrane protein [PF09799.11, score=85.0]} {Human: ENSG00000187049, TMEM216, transmembrane protein 216, [RH, Score=61.2, Expect=7e-12]} {Mouse: ENSMUSG00000024667, Tmem216, transmembrane protein 216, [RH, Score=63.9, Expect=3e-13]} {Dmel: FBgn0037615, CG11760, [RH, Score=63.2, Expect=6e-13]} {Smed: dd_Smed_v6_14636_0_1, dd_Smed_v6_14636_0_1, [RH, Score=82.4, Expect=1e-20]} {RNA1509_39699, RNA1509_53860} {RNA1310_30237, RNA1509_39699, RNA1509_53860} {RNA1509_39699, RNA1509_53860, RNA815_653}
8.	MligTC455_13329	95	1.98	Mlig455_009198	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-1.124		0.951	0.951	-	-	-	-	-	Mlig455_009198 {REF} {Length: 2007} {RNA1509_22077, RNA1509_32545} {RNA1310_29047.1, RNA1509_22077, RNA1509_32545} {RNA1509_22077, RNA1509_32545, RNA815_17550}
9.	MligTC455_24343	499	10.39	Mlig455_009796	Neo: - Age: -		0.951	-	-	-	0.951	-	-	Mlig455_009796 {REF} {Length: 1301} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_8336} {RNA1310_6765} {RNA815_10771}

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