TomoSeq data search

Data search

Results for MligTC455_44980

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_44980

2596

54.07

Mlig455_059798

Neo: -

Age: -

RHBDL2

Mlig455_059798 {REF} {Length: 2781} {Pfam: Rhomboid family [PF01694.24, score=121.4]} {Human: ENSG00000158315, RHBDL2, rhomboid like 2, [RH, Score=193, Expect=3e-58]} {Mouse: ENSMUSG00000043333, Rhbdl2, rhomboid like 2, [RH, Score=206, Expect=2e-63]} {Dmel: FBgn0030318, rho-4, rhomboid-4, [RH, Score=218, Expect=1e-66]} {Celegans: WBGene00004400, rom-1, Rhomboid-related protein 1, [RH, Score=187, Expect=2e-55]} {Smed: dd_Smed_v6_3909_0_1, dd_Smed_v6_3909_0_1, [RH, Score=401, Expect=8e-139]} {RNA1509_17057, RNA1509_20440, RNA1509_39707, RNA1509_46322, RNA1509_7115} {RNA1310_19054, RNA1509_17057, RNA1509_20440, RNA1509_39707, RNA1509_46322, RNA1509_7115} {RNA1509_17057, RNA1509_20440, RNA1509_39707, RNA1509_46322, RNA1509_7115, RNA815_7450}

Cumulative graph for MligTC455_44980

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.052	5.83	0.92474	1.00000
RegionR2	0.128	5.83	0.58265	0.93834
RegionR3	0.062	5.83	0.74784	1.00000
RegionR4	0.031	5.83	0.89742	1.00000
RegionR5	-0.021	5.83	0.91107	1.00000
RegionR6	-0.004	5.83	0.98260	1.00000
RegionR7	-0.231	5.83	0.38130	1.00000
RegionR8	-0.016	5.83	0.95806	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.751	5.83	0.24879	0.96639
RegenerationR2	-0.005	5.83	0.98182	1.00000
RegenerationR3	0.095	5.83	0.67592	0.93910
RegenerationR4	0.182	5.83	0.44127	0.83781
RegenerationR5	-0.054	5.83	0.80592	0.99004
RegenerationR6	0.072	5.83	0.76059	0.95713
RegenerationBL	0.511	5.83	0.04567	0.24466
RegenerationTP	0.404	5.83	0.15275	0.57832

Genes with expression patterns similar to MligTC455_44980

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_44980	2596	54.07	Mlig455_059798	Neo: - Age: -	RHBDL2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_059798 {REF} {Length: 2781} {Pfam: Rhomboid family [PF01694.24, score=121.4]} {Human: ENSG00000158315, RHBDL2, rhomboid like 2, [RH, Score=193, Expect=3e-58]} {Mouse: ENSMUSG00000043333, Rhbdl2, rhomboid like 2, [RH, Score=206, Expect=2e-63]} {Dmel: FBgn0030318, rho-4, rhomboid-4, [RH, Score=218, Expect=1e-66]} {Celegans: WBGene00004400, rom-1, Rhomboid-related protein 1, [RH, Score=187, Expect=2e-55]} {Smed: dd_Smed_v6_3909_0_1, dd_Smed_v6_3909_0_1, [RH, Score=401, Expect=8e-139]} {RNA1509_17057, RNA1509_20440, RNA1509_39707, RNA1509_46322, RNA1509_7115} {RNA1310_19054, RNA1509_17057, RNA1509_20440, RNA1509_39707, RNA1509_46322, RNA1509_7115} {RNA1509_17057, RNA1509_20440, RNA1509_39707, RNA1509_46322, RNA1509_7115, RNA815_7450}
2.	MligTC455_28659	416	8.67	Mlig455_024182	Neo: - Age: Up-Down-Down		1.724	-	0.768	-	-	0.956	-	Mlig455_024182 {REF} {Length: 2105} {RNA1509_38550} {RNA1310_39388.2} {RNA815_16516.1}
3.	MligTC455_25869	51	1.07	Mlig455_033998	Neo: - Age: -		0.978	-	-	-	-	0.978	-	Mlig455_033998 {REF} {Length: 1534} {RNA1310_38735.1} {RNA815_64177}
4.	MligTC455_04788	1208	25.17	Mlig455_023502, Mlig455_023613	Neo: - Age: -	CTU2	0.97	-	-	-	-	0.970	-	Mlig455_023502 {REF} {Length: 2980} {TRANSSPLICED} {Pfam: Cytoplasmic tRNA 2-thiolation protein 2 [PF10288.11, score=44.1]} {Human: ENSG00000174177, CTU2, cytosolic thiouridylase subunit 2, [RH, Score=78.2, Expect=6e-15]} {Mouse: ENSMUSG00000049482, Ctu2, cytosolic thiouridylase subunit 2, [RH, Score=69.3, Expect=3e-12]} {Dmel: FBgn0032793, CG10189, [RH, Score=77.8, Expect=2e-15]} {Smed: dd_Smed_v6_8468_0_1, dd_Smed_v6_8468_0_1, [RH, Score=131, Expect=2e-34]} {RNA1509_20294, RNA1509_28583} {RNA1310_18692, RNA1509_28583} {RNA1509_28583, RNA815_10751} Mlig455_023613 {REF} {Length: 3288} {TRANSSPLICED} {Pfam: Cytoplasmic tRNA 2-thiolation protein 2 [PF10288.11, score=44.1]} {Human: ENSG00000174177, CTU2, cytosolic thiouridylase subunit 2, [RH, Score=78.2, Expect=6e-15]} {Mouse: ENSMUSG00000049482, Ctu2, cytosolic thiouridylase subunit 2, [RH, Score=69.3, Expect=3e-12]} {Dmel: FBgn0032793, CG10189, [RH, Score=77.8, Expect=2e-15]} {Smed: dd_Smed_v6_8468_0_1, dd_Smed_v6_8468_0_1, [RH, Score=131, Expect=2e-34]} {RNA1509_20294} {RNA1310_18692} {RNA815_10751}
5.	MligTC455_36209	110	2.29	Mlig455_012687	Neo: - Age: Up-Down-Up	PCDH11X	0.969	-	-	-	-	0.969	-	Mlig455_012687 {REF} {Length: 5013} {Pfam: Cadherin domain [PF00028.19, score=202.1]; Cadherin-like [PF16184.7, score=33.6]; Cadherin-like [PF08266.14, score=24.8]} {Human: ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=172, Expect=8e-43]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=167, Expect=3e-41]; ENSG00000156453, PCDH1, protocadherin 1, [Score=164, Expect=3e-40]} {Mouse: ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=173, Expect=3e-43]; ENSMUSG00000045657, Pcdhb10, protocadherin beta 10, [Score=170, Expect=7e-43]; ENSMUSG00000102222, Pcdhga10, protocadherin gamma subfamily A, 10, [Score=169, Expect=2e-42]} {Dmel: FBgn0024836, stan, starry night, [Score=158, Expect=1e-38]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=120, Expect=4e-27]} {Smed: dd_Smed_v6_5930_0_1, dd_Smed_v6_5930_0_1, [RH, Score=259, Expect=3e-71]} {RNA1509_20423} {RNA1310_2042.1} {RNA815_1395}
6.	MligTC455_25388	896	18.66	Mlig455_012095	Neo: - Age: -	BIRC8	0.963	-	-	-	-	0.963	-	Mlig455_012095 {REF} {Length: 5636} {Pfam: Inhibitor of Apoptosis domain [PF00653.23, score=81.6]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=47.6]; Prokaryotic RING finger family 4 [PF14447.8, score=20.1]} {Human: ENSG00000163098, BIRC8, baculoviral IAP repeat containing 8, [RH, Score=95.9, Expect=9e-22]} {Mouse: ENSMUSG00000025860, Xiap, X-linked inhibitor of apoptosis, [RH, Score=116, Expect=3e-27]} {Dmel: FBgn0015247, Diap2, Death-associated inhibitor of apoptosis 2, [RH, Score=135, Expect=1e-33]} {Celegans: WBGene00017342, F10D7.5, [Score=49.7, Expect=5e-06]} {Smed: dd_Smed_v6_4626_0_1, dd_Smed_v6_4626_0_1, [RH, Score=66.6, Expect=1e-11]} {RNA1509_10778, RNA1509_13554} {RNA1310_3284.1, RNA1509_13554} {RNA1509_13554, RNA815_964.1}
7.	MligTC455_31264	121	2.51	Mlig455_011843, Mlig455_053936	Neo: - Age: - Region-enriched R4: 4.043/0.01369		0.963	-	-	-	-	0.963	-	Mlig455_011843 {REF} {Length: 1158} {NoTransDecoderORF} {RNA1509_10465} {RNA1310_41374} {RNA815_44473} Mlig455_053936 {REF} {Length: 2855} {RNA1509_10465, RNA1509_32226} {RNA1310_1346.2, RNA1509_10465, RNA1509_32226} {RNA1509_10465, RNA1509_32226, RNA815_3743}
8.	MligTC455_37670	474	9.87	Mlig455_062407	Neo: - Age: Up-Down-Up	PHTF2	0.961	-	-	-	-	0.961	-	Mlig455_062407 {REF} {Length: 6453} {TRANSSPLICED} {Pfam: Male germ-cell putative homeodomain transcription factor [PF12129.10, score=144.8]} {Human: ENSG00000006576, PHTF2, putative homeodomain transcription factor 2, [RH, Score=300, Expect=2e-87]} {Mouse: ENSMUSG00000039987, Phtf2, putative homeodomain transcription factor 2, [RH, Score=301, Expect=3e-88]} {Dmel: FBgn0028579, phtf, [RH, Score=280, Expect=1e-79]} {Smed: dd_Smed_v6_8465_0_1, dd_Smed_v6_8465_0_1, [Score=384, Expect=3e-115]} {RNA1509_34840} {RNA1310_9716} {RNA815_10083}
9.	MligTC455_38435	100	2.08	Mlig455_049767	Neo: - Age: -	PIK3CA	0.961	-	-	-	-	0.961	-	Mlig455_049767 {REF} {Length: 6778} {TRANSSPLICED} {Pfam: Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=164.4]; Phosphoinositide 3-kinase family, accessory domain (PIK domain) [PF00613.22, score=138.3]; Leucine-rich repeat [PF14580.8, score=72.1]; Leucine Rich repeats (2 copies) [PF12799.9, score=67.3]; Phosphoinositide 3-kinase C2 [PF00792.26, score=55.7]; PI3-kinase family, p85-binding domain [PF02192.18, score=54.6]; Leucine rich repeat [PF13855.8, score=53.6]; PI3-kinase family, ras-binding domain [PF00794.20, score=44.7]} {Human: ENSG00000121879, PIK3CA, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha, [RH, Score=661, Expect=0.0]} {Mouse: ENSMUSG00000027665, Pik3ca, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha, [RH, Score=659, Expect=0.0]} {Dmel: FBgn0015279, Pi3K92E, [RH, Score=428, Expect=6e-127]} {Celegans: WBGene00000090, age-1, Phosphatidylinositol 3-kinase age-1, [RH, Score=340, Expect=2e-96]} {Smed: dd_Smed_v6_8025_0_1, dd_Smed_v6_8025_0_1, [RH, Score=566, Expect=4e-178]} {RNA1509_9204} {RNA1310_2625.1} {RNA815_1006}
10.	MligTC455_29999	423	8.81	Mlig455_031441	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.637 Region-enriched R4: 5.833/0.02124		0.956	-	-	-	-	0.956	-	Mlig455_031441 {REF} {Length: 1354} {NoTransDecoderORF} {RNA1509_31776} {RNA1310_7321.1} {RNA815_4667}
11.	MligTC455_20544	2033	42.35	Mlig455_050567	Neo: - Age: - Region-enriched R4: 1.102/0.00802	NDUFS8	0.955	-	-	-	-	0.955	-	Mlig455_050567 {REF} {Length: 1647} {Pfam: 4Fe-4S binding domain [PF00037.29, score=51.9]; 4Fe-4S dicluster domain [PF12838.9, score=50.5]; 4Fe-4S double cluster binding domain [PF13484.8, score=42.9]; 4Fe-4S dicluster domain [PF14697.8, score=37.3]; 4Fe-4S dicluster domain [PF13237.8, score=35.6]; 4Fe-4S dicluster domain [PF13183.8, score=35.5]; 4Fe-4S dicluster domain [PF13187.8, score=34.0]; 4Fe-4S binding domain [PF12837.9, score=29.7]; 4Fe-4S binding domain [PF12800.9, score=26.7]; 4Fe-4S binding domain [PF12797.9, score=25.6]; 4Fe-4S dicluster domain [PF13534.8, score=21.1]; 4Fe-4S single cluster domain of Ferredoxin I [PF13370.8, score=19.3]} {Human: ENSG00000110717, NDUFS8, NADH:ubiquinone oxidoreductase core subunit S8, [RH, Score=305, Expect=3e-106]} {Mouse: ENSMUSG00000059734, Ndufs8, NADH:ubiquinone oxidoreductase core subunit S8, [RH, Score=298, Expect=2e-103]} {Dmel: FBgn0017567, ND-23, NADH dehydrogenase (ubiquinone) 23 kDa subunit, [RH, Score=296, Expect=5e-103]} {Celegans: WBGene00020636, T20H4.5, Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial, [RH, Score=287, Expect=1e-99]} {Smed: dd_Smed_v6_849_0_1, dd_Smed_v6_849_0_1, [RH, Score=293, Expect=3e-102]} {RNA1509_15488, RNA1509_15788, RNA1509_23672, RNA1509_28691, RNA1509_7617} {RNA1310_17612, RNA1509_15488, RNA1509_15788, RNA1509_23672, RNA1509_28691, RNA1509_7617} {RNA1509_15488, RNA1509_15788, RNA1509_23672, RNA1509_28691, RNA1509_7617, RNA815_8734.1}
12.	MligTC455_38507	57	1.19	Mlig455_070639	Neo: Irradiation Age: Up-Down-Up	HASPIN	0.955	-	-	-	-	0.955	-	Mlig455_070639 {REF} {Length: 3983} {TRANSSPLICED} {Pfam: Haspin like kinase domain [PF12330.10, score=187.5]; Protein kinase domain [PF00069.27, score=19.3]} {Human: ENSG00000177602, HASPIN, histone H3 associated protein kinase, [Score=218, Expect=4e-60]} {Mouse: ENSMUSG00000050107, Haspin, histone H3 associated protein kinase, [Score=224, Expect=8e-63]} {Dmel: FBgn0046706, Haspin, [RH, Score=228, Expect=7e-66]} {Celegans: WBGene00007258, hasp-1, HASPin kinase related, [Score=185, Expect=1e-48]} {Smed: dd_Smed_v6_12380_0_1, dd_Smed_v6_12380_0_1, [Score=265, Expect=4e-79]} {RNA1509_15378} {RNA1310_5814.1} {RNA815_8825}
13.	MligTC455_40283	413	8.61	Mlig455_011631, Mlig455_049954	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.581	SLC22A5	0.955	-	-	-	-	0.955	-	Mlig455_011631 {REF} {Length: 4037} {Pfam: Sugar (and other) transporter [PF00083.26, score=78.4]; Major Facilitator Superfamily [PF07690.18, score=56.1]} {Human: ENSG00000197375, SLC22A5, solute carrier family 22 member 5, [Score=165, Expect=1e-43]; ENSG00000172940, SLC22A13, solute carrier family 22 member 13, [Score=158, Expect=3e-41]} {Mouse: ENSMUSG00000074028, Slc22a13, solute carrier family 22 (organic cation transporter), member 13, [Score=174, Expect=3e-47]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=167, Expect=1e-44]} {Celegans: WBGene00003842, oct-1, Organic cation transporter 1, [Score=149, Expect=1e-38]} {Smed: dd_Smed_v6_10903_0_1, dd_Smed_v6_10903_0_1, [Score=154, Expect=9e-41]} {RNA1509_15842} {RNA1310_13367.1, RNA1509_15842} {RNA1509_15842, RNA815_6488} Mlig455_049954 {REF} {Length: 1850} {RNA1310_45348} {RNA815_39114}
14.	MligTC455_23206	315	6.57	Mlig455_059194	Neo: - Age: - Region-enriched R5: 1.610/0.01407	TBC1D16	0.954	-	-	-	-	0.954	-	Mlig455_059194 {REF} {Length: 5091} {TRANSSPLICED} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=39.1]} {Human: ENSG00000167291, TBC1D16, TBC1 domain family member 16, [Score=158, Expect=4e-40]} {Mouse: ENSMUSG00000039976, Tbc1d16, TBC1 domain family, member 16, [Score=159, Expect=1e-40]} {Dmel: FBgn0032249, TBC1D16, TBC1 domain family member 16, [Score=160, Expect=2e-41]} {Celegans: WBGene00018639, tbc-16, TBC (Tre-2/Bub2/Cdc16) domain family, [Score=156, Expect=5e-40]} {RNA1509_29077} {RNA1310_11896} {RNA815_22131}
15.	MligTC455_29110	234	4.88	Mlig455_069633	Neo: - Age: Down-Down-Up, logFC(26M/2M)=1.558 Regeneration-depleted R2: -5.635 Regeneration-depleted R4: -5.388 Regeneration-depleted R3: -4.695	SAA2	0.954	-	-	-	-	0.954	-	Mlig455_069633 {REF} {Length: 1652} {Pfam: Serum amyloid A protein [PF00277.20, score=65.6]} {Human: ENSG00000134339, SAA2, serum amyloid A2, [RH, Score=53.5, Expect=3e-09]; ENSG00000173432, SAA1, serum amyloid A1, [RH, Score=53.5, Expect=2e-09]} {Mouse: ENSMUSG00000040026, Saa3, serum amyloid A 3, [RH, Score=60.8, Expect=3e-12]; ENSMUSG00000074115, Saa1, serum amyloid A 1, [RH, Score=59.7, Expect=7e-12]; ENSMUSG00000057465, Saa2, serum amyloid A 2, [RH, Score=59.3, Expect=6e-12]} {RNA1509_11884} {RNA1310_25670.1, RNA1509_11884} {RNA1509_11884, RNA815_10405}
16.	MligTC455_32066	127	2.64	Mlig455_048493	Neo: - Age: Up-Down-Down	SLC17A9	0.954	-	-	-	-	0.954	-	Mlig455_048493 {REF} {Length: 5594} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=149.1]} {Human: ENSG00000101194, SLC17A9, solute carrier family 17 member 9, [RH, Score=303, Expect=1e-97]} {Mouse: ENSMUSG00000023393, Slc17a9, solute carrier family 17, member 9, [RH, Score=301, Expect=4e-97]} {Dmel: FBgn0025684, MFS18, Major Facilitator Superfamily Transporter 18, [Score=300, Expect=1e-96]} {Celegans: WBGene00010758, vnut-1, Vesicular NUcleotide Transporte, [RH, Score=313, Expect=5e-102]} {Smed: dd_Smed_v6_1326_0_1, dd_Smed_v6_1326_0_1, [Score=394, Expect=3e-133]} {RNA1509_17119} {RNA1310_13718, RNA1509_17119} {RNA1509_17119, RNA815_7003}
17.	MligTC455_14229	116	2.42	Mlig455_067075	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_067075 {REF} {Length: 1955} {RNA1509_33166} {RNA1310_13794.1} {RNA815_5286}
18.	MligTC455_32479	137	2.86	Mlig455_007153	Neo: - Age: Up-Down-Down	CPT1A	0.95	-	-	-	-	0.950	-	Mlig455_007153 {REF} {Length: 4573} {TRANSSPLICED} {Pfam: Choline/Carnitine o-acyltransferase [PF00755.22, score=532.3]} {Human: ENSG00000110090, CPT1A, carnitine palmitoyltransferase 1A, [Score=530, Expect=6e-178]} {Mouse: ENSMUSG00000024900, Cpt1a, carnitine palmitoyltransferase 1a, liver, [Score=527, Expect=1e-176]; ENSMUSG00000078937, Cpt1b, carnitine palmitoyltransferase 1b, muscle, [Score=507, Expect=6e-169]} {Dmel: FBgn0261862, whd, withered, [Score=538, Expect=0.0]} {Celegans: WBGene00012907, cpt-1, Carnitine Palmitoyl Transferase, [Score=498, Expect=1e-165]} {Smed: dd_Smed_v6_5302_0_1, dd_Smed_v6_5302_0_1, [RH, Score=789, Expect=0.0]} {RNA1509_15776, RNA1509_23085} {RNA1310_6605.1, RNA1509_15776, RNA1509_23085} {RNA1509_15776, RNA1509_23085, RNA815_2729.1}

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