Data search
Results for MligTC455_45047
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_45047 | 120 | 2.49 | Mlig455_003525, Mlig455_015540 | Neo: - Age: - |
TDO2 | Mlig455_003525 {REF} {Length: 1883} {Pfam: Tryptophan 2,3-dioxygenase [PF03301.15, score=445.6]} {Human: ENSG00000151790, TDO2, tryptophan 2,3-dioxygenase, [RH, Score=380, Expect=1e-129]; ENSG00000262635, TDO2, tryptophan 2,3-dioxygenase, [RH, Score=380, Expect=1e-129]} {Mouse: ENSMUSG00000028011, Tdo2, tryptophan 2,3-dioxygenase, [RH, Score=389, Expect=2e-133]} {Dmel: FBgn0003965, v, vermilion, [RH, Score=424, Expect=9e-148]} {Celegans: WBGene00016201, tdo-2, Tryptophan 2,3-dioxygenase, [RH, Score=408, Expect=3e-141]} {Smed: dd_Smed_v6_3550_0_1, dd_Smed_v6_3550_0_1, [RH, Score=410, Expect=2e-142]} {RNA1310_20683} {RNA815_9303} Mlig455_015540 {REF} {Length: 1676} {Pfam: Tryptophan 2,3-dioxygenase [PF03301.15, score=445.6]} {Human: ENSG00000151790, TDO2, tryptophan 2,3-dioxygenase, [RH, Score=380, Expect=1e-129]; ENSG00000262635, TDO2, tryptophan 2,3-dioxygenase, [RH, Score=380, Expect=1e-129]} {Mouse: ENSMUSG00000028011, Tdo2, tryptophan 2,3-dioxygenase, [RH, Score=389, Expect=2e-133]} {Dmel: FBgn0003965, v, vermilion, [RH, Score=424, Expect=9e-148]} {Celegans: WBGene00016201, tdo-2, Tryptophan 2,3-dioxygenase, [RH, Score=408, Expect=3e-141]} {Smed: dd_Smed_v6_3550_0_1, dd_Smed_v6_3550_0_1, [RH, Score=410, Expect=2e-142]} {RNA1310_20683} {RNA815_9303} |
Cumulative graph for MligTC455_45047
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 3.721 | 2.229 | 0.10454 | 0.67882 | |
| RegionR2 | -3.825 | 2.229 | 0.99955 | 1.00000 | |
| RegionR3 | 2.455 | 2.229 | 0.00609 | 0.10887 | |
| RegionR4 | 2.409 | 2.229 | 0.04250 | 0.17260 | |
| RegionR5 | -0.526 | 2.229 | 0.92068 | 1.00000 | |
| RegionR6 | -1.87 | 2.229 | 0.99749 | 1.00000 | |
| RegionR7 | -4.549 | 2.229 | 0.10663 | 0.62041 | |
| RegionR8 | 2.185 | 2.229 | 0.14308 | 0.69078 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -8.355 | 2.229 | 0.09230 | 0.80142 | |
| RegenerationR2 | 1.979 | 2.229 | 0.14227 | 0.57288 | |
| RegenerationR3 | -3.065 | 2.229 | 0.00313 | 0.09940 | |
| RegenerationR4 | -1.954 | 2.229 | 0.08088 | 0.45032 | |
| RegenerationR5 | -0.903 | 2.229 | 0.36142 | 0.77258 | |
| RegenerationR6 | -0.376 | 2.229 | 0.73931 | 0.94690 | |
| RegenerationBL | -0.553 | 2.229 | 0.86832 | 1.00000 | |
| RegenerationTP | 1.508 | 2.229 | 0.40597 | 0.83383 |
Genes with expression patterns similar to MligTC455_45047
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_45047 | 120 | 2.49 | Mlig455_003525, Mlig455_015540 | Neo: - Age: - |
TDO2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_003525 {REF} {Length: 1883} {Pfam: Tryptophan 2,3-dioxygenase [PF03301.15, score=445.6]} {Human: ENSG00000151790, TDO2, tryptophan 2,3-dioxygenase, [RH, Score=380, Expect=1e-129]; ENSG00000262635, TDO2, tryptophan 2,3-dioxygenase, [RH, Score=380, Expect=1e-129]} {Mouse: ENSMUSG00000028011, Tdo2, tryptophan 2,3-dioxygenase, [RH, Score=389, Expect=2e-133]} {Dmel: FBgn0003965, v, vermilion, [RH, Score=424, Expect=9e-148]} {Celegans: WBGene00016201, tdo-2, Tryptophan 2,3-dioxygenase, [RH, Score=408, Expect=3e-141]} {Smed: dd_Smed_v6_3550_0_1, dd_Smed_v6_3550_0_1, [RH, Score=410, Expect=2e-142]} {RNA1310_20683} {RNA815_9303} Mlig455_015540 {REF} {Length: 1676} {Pfam: Tryptophan 2,3-dioxygenase [PF03301.15, score=445.6]} {Human: ENSG00000151790, TDO2, tryptophan 2,3-dioxygenase, [RH, Score=380, Expect=1e-129]; ENSG00000262635, TDO2, tryptophan 2,3-dioxygenase, [RH, Score=380, Expect=1e-129]} {Mouse: ENSMUSG00000028011, Tdo2, tryptophan 2,3-dioxygenase, [RH, Score=389, Expect=2e-133]} {Dmel: FBgn0003965, v, vermilion, [RH, Score=424, Expect=9e-148]} {Celegans: WBGene00016201, tdo-2, Tryptophan 2,3-dioxygenase, [RH, Score=408, Expect=3e-141]} {Smed: dd_Smed_v6_3550_0_1, dd_Smed_v6_3550_0_1, [RH, Score=410, Expect=2e-142]} {RNA1310_20683} {RNA815_9303} |
| 2. | MligTC455_48226 | 475 | 9.89 | Mlig455_006039 | Neo: - Age: logFC(26M/2M)=0.772 Region-enriched R4: 2.063/0.02194 |
0.98 | - | - | 0.980 | - | - | - | Mlig455_006039 {REF} {Length: 3886} {Celegans: WBGene00014141, ZK899.2, [RH, Score=145, Expect=5e-39]} {Smed: dd_Smed_v6_3689_0_1, dd_Smed_v6_3689_0_1, [RH, Score=360, Expect=2e-122]} {RNA1509_34003, RNA1509_40119, RNA1509_42065} {RNA1310_14532, RNA1509_34003, RNA1509_40119, RNA1509_42065} {RNA1509_34003, RNA1509_40119, RNA1509_42065, RNA815_4158} | |
| 3. | MligTC455_34535 | 263 | 5.49 | Mlig455_049248 | Neo: Irradiation Age: Up-Down-Up Region-specific R4: 6.607 Region-enriched R4: 6.130/0.00000 |
0.97 | - | - | - | 0.970 | - | - | Mlig455_049248 {REF} {Length: 1298} {Pfam: LITAF-like zinc ribbon domain [PF10601.11, score=58.7]} {Mouse: ENSMUSG00000107252, Gm5767, predicted gene 5767, [Score=41.6, Expect=1e-05]} {Dmel: FBgn0050273, CG30273, [Score=43.1, Expect=4e-06]} {Celegans: WBGene00009484, F36G3.3, [Score=55.5, Expect=1e-10]} {Smed: dd_Smed_v6_2503_0_1, dd_Smed_v6_2503_0_1, [Score=54.3, Expect=8e-11]} {RNA1509_17817, RNA1509_25831, RNA1509_30238, RNA1509_41691} {RNA1310_55265, RNA1509_17817, RNA1509_25831, RNA1509_30238, RNA1509_41691} {RNA1509_17817, RNA1509_25831, RNA1509_30238, RNA1509_41691, RNA815_28858} | |
| 4. | MligTC455_16429 | 167 | 3.49 | Mlig455_048808 | Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.364 Region-enriched R3: 3.219/0.00081 |
0.951 | - | - | 0.951 | - | - | - | Mlig455_048808 {REF} {Length: 3210} {RNA1509_19015} {RNA1310_14440, RNA1509_19015} {RNA1509_19015, RNA815_13456} |