M. lignano Tomo-Seq
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Results for MligTC455_45066

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_45066 142 2.97 Mlig455_032973

Neo: Int S/G2/M

Age: -

 Mlig455_032973 {REF} {Length: 1241} {TRANSSPLICED} {RNA1509_52227} {RNA1310_3302.2} {RNA815_12580}

Cumulative graph for MligTC455_45066

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.749 2.221 0.63622 1.00000
RegionR2 -0.646 2.221 0.38712 0.78135
RegionR3 0.335 2.221 0.56336 1.00000
RegionR4 0.668 2.221 0.34060 0.66057
RegionR5 0.899 2.221 0.08476 0.27257
RegionR6 -0.211 2.221 0.75209 1.00000
RegionR7 -0.472 2.221 0.59663 1.00000
RegionR8 -1.323 2.221 0.30020 0.93092

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.43 2.221 0.17470 0.91661
RegenerationR2 -0.758 2.221 0.22767 0.67553
RegenerationR3 -1.703 2.221 0.01050 0.18739
RegenerationR4 -1.23 2.221 0.06778 0.41581
RegenerationR5 -1.16 2.221 0.04018 0.33021
RegenerationR6 -0.852 2.221 0.25272 0.60262
RegenerationBL -0.92 2.221 0.42344 0.79152
RegenerationTP 0.461 2.221 0.66026 0.99379


Genes with expression patterns similar to MligTC455_45066

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_45066 142 2.97 Mlig455_032973

Neo: Int S/G2/M

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_032973 {REF} {Length: 1241} {TRANSSPLICED} {RNA1509_52227} {RNA1310_3302.2} {RNA815_12580}
2. MligTC455_18412 142 2.96 Mlig455_013438

Neo: -

Age: -

 WDR41 0.971 - - - 0.971 - - Mlig455_013438 {REF} {Length: 2509} {Pfam: WD domain, G-beta repeat [PF00400.34, score=31.8]} {Human: ENSG00000164253, WDR41, WD repeat domain 41, [RH, Score=60.1, Expect=3e-09]} {Mouse: ENSMUSG00000042015, Wdr41, WD repeat domain 41, [Score=56.6, Expect=3e-08]} {RNA1509_34814} {RNA1310_18965} {RNA815_22933}
3. MligTC455_16773 565 11.77 Mlig455_063533

Neo: -

Age: -

 ZRANB2 0.952 - - - - - 0.952 Mlig455_063533 {REF} {Length: 2907} {TRANSSPLICED} {Pfam: Zn-finger in Ran binding protein and others [PF00641.20, score=32.8]} {Human: ENSG00000132485, ZRANB2, zinc finger RANBP2-type containing 2, [RH, Score=117, Expect=4e-30]} {Mouse: ENSMUSG00000028180, Zranb2, zinc finger, RAN-binding domain containing 2, [RH, Score=117, Expect=3e-30]} {Dmel: FBgn0034750, CG3732, [RH, Score=104, Expect=8e-26]} {Celegans: WBGene00021295, Y25C1A.8, Zinc finger Ran-binding domain-containing protein 2, [RH, Score=98.6, Expect=3e-23]} {Smed: dd_Smed_v6_1397_0_1, dd_Smed_v6_1397_0_1, [RH, Score=145, Expect=2e-41]} {RNA1509_2133, RNA1509_39074, RNA1509_4616, RNA1509_47611, RNA1509_52132} {RNA1310_24426, RNA1509_2133, RNA1509_39074, RNA1509_4616, RNA1509_47611, RNA1509_52132} {RNA1509_2133, RNA1509_39074, RNA1509_4616, RNA1509_47611, RNA1509_52132, RNA815_12758}
4. MligTC455_36124 485 10.1 Mlig455_021463, Mlig455_067345

Neo: -

Age: -

Region-enriched R5: 1.039/0.02201

 LZTS3 0.95 - - - - - 0.950

Mlig455_021463 {REF} {Length: 2649} {TRANSSPLICED} {Pfam: Fez1 [PF06818.17, score=43.5]} {Human: ENSG00000088899, LZTS3, leucine zipper tumor suppressor family member 3, [Score=49.3, Expect=1e-05]} {Mouse: ENSMUSG00000037703, Lzts3, leucine zipper, putative tumor suppressor family member 3, [Score=48.5, Expect=1e-05]} {RNA1509_39406} {RNA1310_16279.1, RNA1509_39406} {RNA1509_39406, RNA815_18126}

Mlig455_067345 {REF} {Length: 3391} {TRANSSPLICED} {Pfam: Fez1 [PF06818.17, score=48.7]} {Human: ENSG00000088899, LZTS3, leucine zipper tumor suppressor family member 3, [Score=48.1, Expect=1e-05]} {Mouse: ENSMUSG00000037703, Lzts3, leucine zipper, putative tumor suppressor family member 3, [Score=47.8, Expect=8e-06]} {RNA1509_39406} {RNA1310_24643} {RNA815_18126}

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