Data search
Results for MligTC455_45138
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_45138 | 766 | 15.95 | Mlig455_054488 | Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 1.152/0.00374 |
NUP43 | Mlig455_054488 {REF} {Length: 1492} {TRANSSPLICED} {Human: ENSG00000120253, NUP43, nucleoporin 43, [RH, Score=110, Expect=1e-26]} {Mouse: ENSMUSG00000040034, Nup43, nucleoporin 43, [RH, Score=108, Expect=3e-26]; ENSMUSG00000116037, Nup43, nucleoporin 43, [RH, Score=108, Expect=3e-26]} {Dmel: FBgn0038609, Nup43, Nucleoporin 43kD, [RH, Score=63.2, Expect=1e-10]} {RNA1509_39524, RNA1509_45166} {RNA1310_19187, RNA1509_39524, RNA1509_45166} {RNA1509_39524, RNA1509_45166, RNA815_20236.1} |
Cumulative graph for MligTC455_45138
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.044 | 4.198 | 0.21838 | 0.86058 | |
| RegionR2 | 0.023 | 4.198 | 0.96243 | 1.00000 | |
| RegionR3 | -0.407 | 4.198 | 0.33623 | 0.87316 | |
| RegionR4 | 0.146 | 4.198 | 0.70267 | 0.99094 | |
| RegionR5 | 1.152 | 4.198 | 0.00028 | 0.00374 | |
| RegionR6 | 0.153 | 4.198 | 0.69751 | 1.00000 | |
| RegionR7 | -0.919 | 4.198 | 0.16258 | 0.74452 | |
| RegionR8 | -1.193 | 4.198 | 0.19826 | 0.79510 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.432 | 4.198 | 0.25013 | 0.96639 | |
| RegenerationR2 | -0.491 | 4.198 | 0.24799 | 0.69499 | |
| RegenerationR3 | 0.648 | 4.198 | 0.13576 | 0.56024 | |
| RegenerationR4 | 0.111 | 4.198 | 0.77477 | 0.97849 | |
| RegenerationR5 | -0.472 | 4.198 | 0.17834 | 0.60690 | |
| RegenerationR6 | 0.624 | 4.198 | 0.12978 | 0.44265 | |
| RegenerationBL | 1.166 | 4.198 | 0.03723 | 0.21835 | |
| RegenerationTP | 1.69 | 4.198 | 0.00991 | 0.16909 |
Genes with expression patterns similar to MligTC455_45138
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_45138 | 766 | 15.95 | Mlig455_054488 | Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 1.152/0.00374 |
NUP43 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_054488 {REF} {Length: 1492} {TRANSSPLICED} {Human: ENSG00000120253, NUP43, nucleoporin 43, [RH, Score=110, Expect=1e-26]} {Mouse: ENSMUSG00000040034, Nup43, nucleoporin 43, [RH, Score=108, Expect=3e-26]; ENSMUSG00000116037, Nup43, nucleoporin 43, [RH, Score=108, Expect=3e-26]} {Dmel: FBgn0038609, Nup43, Nucleoporin 43kD, [RH, Score=63.2, Expect=1e-10]} {RNA1509_39524, RNA1509_45166} {RNA1310_19187, RNA1509_39524, RNA1509_45166} {RNA1509_39524, RNA1509_45166, RNA815_20236.1} |
| 2. | MligTC455_23475 | 1826 | 38.04 | Mlig455_019224, Mlig455_035556, Mlig455_035579 | Neo: - Age: - |
AP1M1 | 1.74 | - | 0.780 | - | - | 0.960 | - | Mlig455_019224 {REF} {Length: 3307} {TRANSSPLICED} {Pfam: Adaptor complexes medium subunit family [PF00928.23, score=301.4]; Clathrin adaptor complex small chain [PF01217.22, score=24.8]} {Human: ENSG00000072958, AP1M1, adaptor related protein complex 1 subunit mu 1, [RH, Score=725, Expect=0.0]; ENSG00000129354, AP1M2, adaptor related protein complex 1 subunit mu 2, [RH, Score=689, Expect=0.0]} {Mouse: ENSMUSG00000003033, Ap1m1, adaptor-related protein complex AP-1, mu subunit 1, [RH, Score=723, Expect=0.0]} {Dmel: FBgn0024833, AP-1mu, Adaptor Protein complex 1, mu subunit, [RH, Score=731, Expect=0.0]} {Celegans: WBGene00006829, unc-101, AP-1 complex subunit mu-1-I, [RH, Score=668, Expect=0.0]} {Smed: dd_Smed_v6_2650_0_1, dd_Smed_v6_2650_0_1, [RH, Score=723, Expect=0.0]} {RNA1509_39030} {RNA1310_10244.1} {RNA815_4681.1} Mlig455_035556 {REF} {Length: 512} {NoTransDecoderORF} {RNA1509_46674} {RNA1310_41915} {RNA815_20386} Mlig455_035579 {REF} {Length: 3364} {TRANSSPLICED} {Pfam: Adaptor complexes medium subunit family [PF00928.23, score=301.6]; Clathrin adaptor complex small chain [PF01217.22, score=24.8]} {Human: ENSG00000072958, AP1M1, adaptor related protein complex 1 subunit mu 1, [RH, Score=727, Expect=0.0]} {Mouse: ENSMUSG00000003033, Ap1m1, adaptor-related protein complex AP-1, mu subunit 1, [RH, Score=724, Expect=0.0]} {Dmel: FBgn0024833, AP-1mu, Adaptor Protein complex 1, mu subunit, [RH, Score=733, Expect=0.0]} {Celegans: WBGene00006829, unc-101, AP-1 complex subunit mu-1-I, [RH, Score=669, Expect=0.0]} {Smed: dd_Smed_v6_2650_0_1, dd_Smed_v6_2650_0_1, [RH, Score=724, Expect=0.0]} {RNA1509_17317, RNA1509_46674, RNA1509_6192} {RNA1310_10244.1, RNA1509_17317, RNA1509_46674, RNA1509_6192} {RNA1509_17317, RNA1509_46674, RNA1509_6192, RNA815_4681.1} |
| 3. | MligTC455_08323 | 2344 | 48.84 | Mlig455_054182 | Neo: Int S/G2/M Age: - |
ROMO1 | 1.687 | - | - | - | - | 0.729 | 0.958 | Mlig455_054182 {REF} {Length: 876} {TRANSSPLICED} {Pfam: Reactive mitochondrial oxygen species modulator 1 [PF10247.11, score=80.5]} {Human: ENSG00000125995, ROMO1, reactive oxygen species modulator 1, [RH, Score=86.7, Expect=3e-23]} {Mouse: ENSMUSG00000067847, Romo1, reactive oxygen species modulator 1, [RH, Score=86.7, Expect=2e-23]} {Dmel: FBgn0036488, CG6878, [RH, Score=87.8, Expect=4e-24]} {Smed: dd_Smed_v6_691_0_1, dd_Smed_v6_691_0_1, [RH, Score=76.6, Expect=6e-20]} {RNA1509_18222, RNA1509_19678} {RNA1310_23209.2, RNA1509_18222, RNA1509_19678} {RNA1509_18222, RNA1509_19678, RNA815_29226.2} |
| 4. | MligTC455_33955 | 1315 | 27.41 | Mlig455_057554 | Neo: Int S/G2/M Age: - |
STRIP1 | 1.677 | - | - | 0.722 | - | - | 0.955 | Mlig455_057554 {REF} {Length: 3620} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF3402) [PF11882.10, score=315.4]; N1221-like protein [PF07923.15, score=147.5]} {Human: ENSG00000143093, STRIP1, striatin interacting protein 1, [RH, Score=728, Expect=0.0]; ENSG00000128578, STRIP2, striatin interacting protein 2, [RH, Score=696, Expect=0.0]} {Mouse: ENSMUSG00000014601, Strip1, striatin interacting protein 1, [RH, Score=728, Expect=0.0]; ENSMUSG00000039629, Strip2, striatin interacting protein 2, [RH, Score=694, Expect=0.0]} {Dmel: FBgn0035437, Strip, Striatin interacting protein, [RH, Score=492, Expect=3e-159]} {Celegans: WBGene00017349, farl-11, FAR (Factor ARrest) Like, [RH, Score=468, Expect=8e-150]} {Smed: dd_Smed_v6_2332_0_1, dd_Smed_v6_2332_0_1, [RH, Score=555, Expect=0.0]} {RNA1509_18715, RNA1509_27157, RNA1509_30657, RNA1509_39552, RNA1509_56414, RNA1509_6572} {RNA1310_3042, RNA1509_18715, RNA1509_27157, RNA1509_30657, RNA1509_39552, RNA1509_56414, RNA1509_6572} {RNA1509_18715, RNA1509_27157, RNA1509_30657, RNA1509_39552, RNA1509_56414, RNA1509_6572, RNA815_696} |
| 5. | MligTC455_29281 | 1359 | 28.31 | Mlig455_000186, Mlig455_067707 | Neo: - Age: - |
RPS20, SLMAP | 1.654 | - | 0.702 | - | - | - | 0.952 | Mlig455_000186 {REF} {Length: 4189} {Pfam: FHA domain [PF00498.28, score=65.5]; Fez1 [PF06818.17, score=20.8]; Inner membrane component of T3SS, cytoplasmic domain [PF16697.7, score=19.0]} {Human: ENSG00000163681, SLMAP, sarcolemma associated protein, [RH, Score=254, Expect=7e-74]} {Mouse: ENSMUSG00000021870, Slmap, sarcolemma associated protein, [RH, Score=252, Expect=2e-73]} {Dmel: FBgn0040011, Slmap, Sarcolemma associated protein, [Score=186, Expect=1e-49]} {Celegans: WBGene00019766, M4.1, [RH, Score=202, Expect=7e-57]} {Smed: dd_Smed_v6_3763_0_5, dd_Smed_v6_3763_0_5, [Score=247, Expect=3e-75]} {RNA1509_20169} {RNA1310_5284.1} {RNA815_8488} Mlig455_067707 {REF} {Length: 4007} {TRANSSPLICED} {Pfam: Ribosomal protein S10p/S20e [PF00338.24, score=51.0]} {Human: ENSG00000008988, RPS20, ribosomal protein S20, [Score=132, Expect=2e-36]} {Mouse: ENSMUSG00000028234, Rps20, ribosomal protein S20, [Score=132, Expect=2e-36]} {Dmel: FBgn0019936, RpS20, Ribosomal protein S20, [Score=128, Expect=6e-35]} {Celegans: WBGene00004489, rps-20, Ribosomal Protein, Small subunit, [Score=128, Expect=3e-35]} {Smed: dd_Smed_v6_123_0_2, dd_Smed_v6_123_0_2, [Score=107, Expect=1e-27]} {RNA1509_20169} {RNA1310_5284.1} {RNA815_8488} |
| 6. | MligTC455_28008 | 1580 | 32.91 | Mlig455_005374 | Neo: - Age: Down-Down-Up |
0.957 | - | - | - | - | 0.957 | - | Mlig455_005374 {REF} {Length: 1804} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=20.1]} {RNA1509_22337} {RNA1310_8217} {RNA815_80.1} | |
| 7. | MligTC455_18701 | 462 | 9.62 | Mlig455_002151 | Neo: - Age: - |
RPS7 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_002151 {REF} {Length: 4747} {TRANSSPLICED} {Pfam: Ribosomal protein S7e [PF01251.20, score=189.9]; Major intrinsic protein [PF00230.22, score=18.7]} {Human: ENSG00000171863, RPS7, ribosomal protein S7, [Score=198, Expect=2e-60]} {Mouse: ENSMUSG00000061477, Rps7, ribosomal protein S7, [Score=198, Expect=2e-60]; ENSMUSG00000044424, Gm9493, predicted gene 9493, [Score=198, Expect=2e-60]} {Dmel: FBgn0039757, RpS7, Ribosomal protein S7, [Score=177, Expect=1e-52]} {Celegans: WBGene00004476, rps-7, 40S ribosomal protein S7, [Score=165, Expect=3e-48]} {Smed: dd_Smed_v6_204_0_1, dd_Smed_v6_204_0_1, [Score=156, Expect=6e-45]} {RNA1509_51916, RNA1509_53833} {RNA1310_2260.1, RNA1509_53833} {RNA1509_53833, RNA815_12689} |
| 8. | MligTC455_32807 | 720 | 14.99 | Mlig455_030821 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 2.769/0.00001 Regeneration-enriched BL: 3.839 |
KHDRBS3 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_030821 {REF} {Length: 3309} {TRANSSPLICED} {Pfam: KH domain [PF00013.31, score=29.2]} {Human: ENSG00000131773, KHDRBS3, KH RNA binding domain containing, signal transduction associated 3, [RH, Score=139, Expect=7e-37]; ENSG00000112232, KHDRBS2, KH RNA binding domain containing, signal transduction associated 2, [RH, Score=137, Expect=5e-36]} {Mouse: ENSMUSG00000022332, Khdrbs3, KH domain containing, RNA binding, signal transduction associated 3, [RH, Score=139, Expect=3e-37]; ENSMUSG00000026058, Khdrbs2, KH domain containing, RNA binding, signal transduction associated 2, [RH, Score=136, Expect=8e-36]} {Dmel: FBgn0022987, qkr54B, quaking related 54B, [RH, Score=120, Expect=3e-29]} {Celegans: WBGene00017098, E02D9.1, [RH, Score=91.3, Expect=3e-20]} {Smed: dd_Smed_v6_1578_0_1, dd_Smed_v6_1578_0_1, [RH, Score=173, Expect=9e-51]} {RNA1509_11211, RNA1509_38307} {RNA1310_24255.1, RNA1509_38307} {RNA1509_38307, RNA815_10620} |
| 9. | MligTC455_09648 | 258 | 5.37 | Mlig455_057446 | Neo: - Age: - |
0.951 | - | - | - | - | - | 0.951 | Mlig455_057446 {REF} {Length: 340} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_2201} {RNA815_38675} | |
| 10. | MligTC455_33112 | 1943 | 40.48 | Mlig455_056287 | Neo: Int S/G2/M Age: Down-Up-Down, logFC(26M/2M)=-0.325 Region-enriched R4: 1.321/0.00765 |
POMP | 0.951 | - | - | - | - | 0.951 | - | Mlig455_056287 {REF} {Length: 705} {TRANSSPLICED} {Pfam: Proteasome maturation factor UMP1 [PF05348.13, score=75.0]} {Human: ENSG00000132963, POMP, proteasome maturation protein, [RH, Score=90.9, Expect=9e-24]} {Mouse: ENSMUSG00000029649, Pomp, proteasome maturation protein, [RH, Score=90.1, Expect=1e-23]} {Dmel: FBgn0032884, Pomp, [RH, Score=78.2, Expect=4e-19]} {RNA1509_949} {RNA1310_48599} {RNA815_25766} |
| 11. | MligTC455_42987 | 33 | 0.69 | Mlig455_004214 | Neo: - Age: - |
0.951 | - | - | - | 0.951 | - | - | Mlig455_004214 {REF} {Length: 1414} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=26.5]; F-box domain [PF00646.35, score=19.0]} {Dmel: FBgn0034893, mRpL43, mitochondrial ribosomal protein L43, [RH, Score=110, Expect=5e-28]} {Celegans: WBGene00007712, mrpl-34, Mitochondrial Ribosomal Protein, Large, [RH, Score=108, Expect=1e-27]} {Smed: dd_Smed_v6_4636_0_1, dd_Smed_v6_4636_0_1, [RH, Score=104, Expect=3e-26]} {RNA1509_41701} {RNA1310_20021.1} {RNA815_24275} |
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