M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_45140

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_45140 305 6.36 Mlig455_002881

Neo: -

Age: Up-Down-Up

Region-enriched R4: 2.928/0.00054

 Mlig455_002881 {REF} {Length: 3199} {RNA1509_51326} {RNA1310_29977} {RNA815_18001}

Cumulative graph for MligTC455_45140

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 2.62 3.165 0.04535 0.51052
RegionR2 -2.136 3.165 0.01590 0.13351
RegionR3 -0.724 3.165 0.29887 0.84142
RegionR4 2.928 3.165 0.00003 0.00054
RegionR5 -2.082 3.165 0.00397 0.02917
RegionR6 -0.939 3.165 0.19574 0.76435
RegionR7 1.449 3.165 0.03487 0.35565
RegionR8 -1.116 3.165 0.41988 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -8.112 3.165 0.03748 0.65504
RegenerationR2 1.433 3.165 0.08044 0.45679
RegenerationR3 0.937 3.165 0.22607 0.66137
RegenerationR4 -1.63 3.165 0.02760 0.26675
RegenerationR5 1.092 3.165 0.17327 0.60237
RegenerationR6 0.967 3.165 0.21155 0.55499
RegenerationBL -0.179 3.165 0.86125 1.00000
RegenerationTP 0.119 3.165 0.90038 1.00000


Genes with expression patterns similar to MligTC455_45140

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_45140 305 6.36 Mlig455_002881

Neo: -

Age: Up-Down-Up

Region-enriched R4: 2.928/0.00054

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_002881 {REF} {Length: 3199} {RNA1509_51326} {RNA1310_29977} {RNA815_18001}
2. MligTC455_06953 256 5.32 Mlig455_033854, Mlig455_033869

Neo: Germline

Age: -

Region-specific R4: 6.199

Region-enriched R4: 4.220/0.00001

 3.457 0.952 0.974 - - 0.803 0.728

Mlig455_033854 {REF} {Length: 472} {RNA1509_39205} {RNA1310_91393} {RNA815_51514}

Mlig455_033869 {REF} {Length: 879} {RNA1509_39205} {RNA1310_91393, RNA1509_39205} {RNA1509_39205, RNA815_51514}
3. MligTC455_20271 58 1.2 Mlig455_013994

Neo: Germline

Age: Up-Down-Up

 3.449 0.956 0.950 - - 0.796 0.747 Mlig455_013994 {REF} {Length: 1947} {RNA1509_45350} {RNA1310_35055, RNA1509_45350} {RNA1509_45350, RNA815_40723}
4. MligTC455_22696 215 4.49 Mlig455_007739

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.131

Region-enriched R4: 4.559/0.00001

 3.415 0.752 0.953 0.923 - 0.787 - Mlig455_007739 {REF} {Length: 3670} {RNA1509_53615} {RNA1310_31038} {RNA815_29415}
5. MligTC455_10867 57 1.18 Mlig455_046891

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 5.521/0.00948

 3.397 0.929 0.952 - - 0.779 0.737 Mlig455_046891 {REF} {Length: 2746} {RNA1509_42777} {RNA1310_7703.1, RNA1509_42777} {RNA1509_42777, RNA815_8578}
6. MligTC455_11005 58 1.21 Mlig455_016552

Neo: Int S/G2/M

Age: Up-Down-Down

Region-enriched R4: 4.838/0.00052

 TIMM50 3.359 0.918 0.974 - - 0.713 0.754 Mlig455_016552 {REF} {Length: 1307} {Pfam: NLI interacting factor-like phosphatase [PF03031.20, score=68.9]} {Human: ENSG00000105197, TIMM50, translocase of inner mitochondrial membrane 50, [Score=49.3, Expect=4e-06]} {Mouse: ENSMUSG00000003438, Timm50, translocase of inner mitochondrial membrane 50, [Score=49.3, Expect=2e-06]} {RNA1509_50253} {RNA1310_32792, RNA1509_50253} {RNA1509_50253, RNA815_34377}
7. MligTC455_33993 221 4.61 Mlig455_055039, Mlig455_055058

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.710

Region-specific R4: 6.949

Regeneration-enriched R6: 6.034
Regeneration-enriched R2: 5.029

 3.337 0.961 0.844 - - 0.814 0.718

Mlig455_055039 {REF} {Length: 4245} {RNA1509_15103} {RNA1310_4294.1} {RNA815_17182}

Mlig455_055058 {REF} {Length: 2973} {RNA1509_15103} {RNA1310_4294.1} {RNA815_35904}
8. MligTC455_23883 424 8.84 Mlig455_046651, Mlig455_046674

Neo: -

Age: logFC(26M/2M)=0.357

Region-specific R4: 5.830

Region-enriched R4: 4.790/0.00001

 MFSD8 3.33 0.916 0.967 - - 0.747 0.700

Mlig455_046651 {REF} {Length: 2831} {Pfam: Major Facilitator Superfamily [PF07690.18, score=79.8]} {Human: ENSG00000164073, MFSD8, major facilitator superfamily domain containing 8, [Score=55.5, Expect=5e-08]} {Dmel: FBgn0035767, Cln7, [Score=48.1, Expect=1e-05]} {Smed: dd_Smed_v6_16240_0_1, dd_Smed_v6_16240_0_1, [Score=259, Expect=6e-82]} {RNA1509_25972} {RNA1310_12634} {RNA815_4731}

Mlig455_046674 {REF} {Length: 804} {RNA1509_31036} {RNA1310_51089, RNA1509_31036} {RNA1509_31036, RNA815_25707}
9. MligTC455_25163 344 7.17 Mlig455_036820

Neo: Germline

Age: Down-Up-Down

Region-specific R4: 4.706

Region-enriched R4: 3.857/0.00000

 3.302 0.950 0.862 - - 0.776 0.714 Mlig455_036820 {REF} {Length: 1454} {RNA1509_17583} {RNA1310_44647} {RNA815_22309}
10. MligTC455_02531 77 1.61 Mlig455_068712

Neo: Germline

Age: -

Region-specific R4: 6.413

 3.273 0.871 0.975 - - 0.717 0.710 Mlig455_068712 {REF} {Length: 290} {NoTransDecoderORF} {RNA1310_95518}
11. MligTC455_48331 417 8.7 Mlig455_017102

Neo: Germline

Age: -

Region-specific R4: 5.847

Region-enriched R4: 3.617/0.00070

 KREMEN1 3.264 0.899 0.956 - - 0.706 0.703 Mlig455_017102 {REF} {Length: 1266} {Pfam: WSC domain [PF01822.21, score=65.8]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=54.3, Expect=5e-09]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=46.6, Expect=2e-06]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=61.2, Expect=1e-11]} {RNA1509_18753, RNA1509_20112} {RNA1310_46024, RNA1509_18753, RNA1509_20112} {RNA1509_18753, RNA1509_20112, RNA815_24313}
12. MligTC455_18927 275 5.73 Mlig455_035769

Neo: Germline

Age: -

Region-specific R4: 7.464

Region-enriched R4: 5.533/0.00007

 3.252 0.955 0.877 - - 0.720 0.700 Mlig455_035769 {REF} {Length: 631} {RNA1509_17502} {RNA1310_59625} {RNA815_36809}
13. MligTC455_53220 23 0.48 Mlig455_054780

Neo: -

Age: -

 CALM3 3.249 0.872 0.969 - - 0.701 0.707 Mlig455_054780 {REF} {Length: 1118} {Pfam: EF hand [PF00036.34, score=112.6]; EF-hand domain pair [PF13499.8, score=105.9]; EF-hand domain [PF13405.8, score=102.1]; EF hand [PF13202.8, score=83.2]; EF-hand domain pair [PF13833.8, score=80.5]; EF-hand domain [PF14658.8, score=49.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=29.3]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=27.1]} {Human: ENSG00000160014, CALM3, calmodulin 3, [Score=158, Expect=5e-49]; ENSG00000198668, CALM1, calmodulin 1, [Score=158, Expect=5e-49]; ENSG00000143933, CALM2, calmodulin 2, [Score=158, Expect=5e-49]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=158, Expect=4e-49]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=158, Expect=4e-49]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=158, Expect=4e-49]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=155, Expect=2e-48]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=155, Expect=3e-48]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=155, Expect=2e-48]} {RNA1509_14862} {RNA1310_12093.1} {RNA815_4241}
14. MligTC455_40299 211 4.39 Mlig455_029201

Neo: Germline

Age: -

 3.23 0.834 0.974 - - 0.706 0.716 Mlig455_029201 {REF} {Length: 1127} {RNA1509_21847} {RNA1310_36586, RNA1509_21847} {RNA1509_21847, RNA815_19114}
15. MligTC455_48113 452 9.41 Mlig455_010457, Mlig455_010466, Mlig455_010477

Neo: Int S/G2/M

Age: -

Region-enriched R4: 2.690/0.01796

 SLC16A12 2.723 0.889 0.951 - - - 0.883

Mlig455_010457 {REF} {Length: 1747} {Pfam: Major Facilitator Superfamily [PF07690.18, score=82.3]} {Human: ENSG00000152779, SLC16A12, solute carrier family 16 member 12, [Score=63.2, Expect=5e-10]} {Mouse: ENSMUSG00000009378, Slc16a12, solute carrier family 16 (monocarboxylic acid transporters), member 12, [Score=75.5, Expect=4e-14]} {Dmel: FBgn0033095, CG3409, [Score=84.0, Expect=8e-17]} {Celegans: WBGene00015676, mct-6, MonoCarboxylate Transporter family, [Score=52.8, Expect=4e-07]} {RNA1509_48724} {RNA1310_18675} {RNA815_10890}

Mlig455_010466 {REF} {Length: 2929} {Pfam: Major Facilitator Superfamily [PF07690.18, score=78.5]} {Human: ENSG00000152779, SLC16A12, solute carrier family 16 member 12, [Score=60.8, Expect=3e-09]} {Mouse: ENSMUSG00000009378, Slc16a12, solute carrier family 16 (monocarboxylic acid transporters), member 12, [Score=68.6, Expect=9e-12]} {Dmel: FBgn0033095, CG3409, [Score=85.9, Expect=3e-17]} {RNA1509_48724} {RNA1310_18675, RNA1509_48724} {RNA1509_48724, RNA815_10890}

Mlig455_010477 {REF} {Length: 1692} {Pfam: Major Facilitator Superfamily [PF07690.18, score=82.3]} {Human: ENSG00000152779, SLC16A12, solute carrier family 16 member 12, [Score=63.2, Expect=5e-10]} {Mouse: ENSMUSG00000009378, Slc16a12, solute carrier family 16 (monocarboxylic acid transporters), member 12, [Score=75.5, Expect=4e-14]} {Dmel: FBgn0033095, CG3409, [Score=84.0, Expect=8e-17]} {Celegans: WBGene00015676, mct-6, MonoCarboxylate Transporter family, [Score=52.8, Expect=4e-07]} {RNA1509_48724} {RNA1310_18675} {RNA815_10890}
16. MligTC455_11214 227 4.72 Mlig455_041296, Mlig455_056196

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.610

Region-enriched R4: 4.997/0.00000

 2.722 0.924 0.970 - - - 0.828

Mlig455_041296 {REF} {Length: 2230} {Mouse: ENSMUSG00000038522, Mfsd4b1, major facilitator superfamily domain containing 4B1, [Score=67.8, Expect=1e-11]; ENSMUSG00000071335, Mfsd4b3, major facilitator superfamily domain containing 4B3, [Score=64.7, Expect=8e-11]} {RNA1509_25958} {RNA1310_9369} {RNA815_37361}

Mlig455_056196 {REF} {Length: 2701} {Mouse: ENSMUSG00000038522, Mfsd4b1, major facilitator superfamily domain containing 4B1, [Score=67.8, Expect=1e-11]; ENSMUSG00000071335, Mfsd4b3, major facilitator superfamily domain containing 4B3, [Score=64.7, Expect=8e-11]} {RNA1509_25958} {RNA1310_9369, RNA1509_25958} {RNA1509_25958, RNA815_37361}
17. MligTC455_31115 242 5.05 Mlig455_062202

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 3.775

 2.713 0.937 0.975 - - - 0.801 Mlig455_062202 {REF} {Length: 2708} {TRANSSPLICED} {Pfam: F-box [PF15966.7, score=23.3]; F-box domain [PF00646.35, score=18.7]} {RNA1509_49867} {RNA1310_14171, RNA1509_49867} {RNA1509_49867, RNA815_5174}
18. MligTC455_16187 53 1.11 Mlig455_009633

Neo: Irradiation

Age: -

 2.711 0.939 0.965 - - 0.807 - Mlig455_009633 {REF} {Length: 1449} {RNA1509_54440} {RNA1310_47805} {RNA815_24332}
19. MligTC455_51887 123 2.56 Mlig455_009015

Neo: Int S/G2/M

Age: -

Region-enriched R4: 4.290/0.00000

 2.708 0.816 0.935 - - - 0.957 Mlig455_009015 {REF} {Length: 2778} {Pfam: Nucleoside 2-deoxyribosyltransferase [PF05014.17, score=23.6]} {Mouse: ENSMUSG00000040658, Dnph1, 2'-deoxynucleoside 5'-phosphate N-hydrolase 1, [Score=48.1, Expect=5e-07]} {RNA1509_34641} {RNA1310_41930} {RNA815_14966}
20. MligTC455_23386 255 5.31 Mlig455_026946

Neo: Irradiation

Age: Down-Down-Up

Region-specific R4: 3.845

Region-enriched R4: 2.608/0.00005

 2.704 0.927 0.955 - - - 0.822 Mlig455_026946 {REF} {Length: 3126} {Pfam: Homeodomain-like domain [PF13565.8, score=21.8]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=43.5, Expect=2e-06]} {RNA1509_54267} {RNA1310_9985} {RNA815_5533.1}
21. MligTC455_02511 241 5.03 Mlig455_010299, Mlig455_065662

Neo: -

Age: Down-Up-Up

Region-specific R4: 4.092

Region-enriched R4: 4.034/0.00000

 UBC 2.704 0.960 0.895 - - - 0.849

Mlig455_010299 {REF} {Length: 3709} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=24.3]} {RNA1509_22361} {RNA1310_28812} {RNA815_32600}

Mlig455_065662 {REF} {Length: 3304} {TRANSSPLICED} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=33.4]; Ubiquitin family [PF00240.25, score=24.4]} {Human: ENSG00000150991, UBC, ubiquitin C, [Score=58.2, Expect=4e-10]; ENSG00000170315, UBB, ubiquitin B, [Score=57.8, Expect=1e-09]} {Mouse: ENSMUSG00000008348, Ubc, ubiquitin C, [Score=57.8, Expect=2e-09]; ENSMUSG00000019505, Ubb, ubiquitin B, [Score=57.4, Expect=3e-09]} {Dmel: FBgn0086558, Ubi-p5E, Ubiquitin-5E, [Score=57.4, Expect=7e-09]} {Celegans: WBGene00006728, ubq-2, Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40, [Score=54.3, Expect=4e-09]} {Smed: dd_Smed_v6_458_0_1, dd_Smed_v6_458_0_1, [Score=54.7, Expect=9e-10]} {RNA1509_22361} {RNA1310_28812} {RNA815_35171}
22. MligTC455_49964 650 13.53 Mlig455_068163

Neo: Irradiation

Age: -

Region-specific R4: 2.893

Region-enriched R4: 1.519/0.00162

 AGRN 2.696 0.879 0.952 - - - 0.865 Mlig455_068163 {REF} {Length: 4154} {Pfam: Kazal-type serine protease inhibitor domain [PF07648.17, score=143.9]; Kazal-type serine protease inhibitor domain [PF00050.23, score=74.6]} {Human: ENSG00000188157, AGRN, agrin, [Score=100, Expect=1e-21]} {Mouse: ENSMUSG00000041936, Agrn, agrin, [Score=111, Expect=9e-26]} {Dmel: FBgn0052354, CG32354, [Score=62.4, Expect=4e-10]} {Celegans: WBGene00018304, agr-1, AGRin (Synaptic protein) homolog; AGRin (Synaptic protein) homolog family member, [Score=139, Expect=3e-35]} {Smed: dd_Smed_v6_3649_0_1, dd_Smed_v6_3649_0_1, [Score=160, Expect=1e-42]} {RNA1509_14157, RNA1509_47154} {RNA1310_33618.1, RNA1509_14157, RNA1509_47154} {RNA1509_14157, RNA1509_47154, RNA815_11942}
23. MligTC455_23407 56 1.16 Mlig455_000837

Neo: Germline

Age: -

Region-enriched R4: 3.808/0.04446

 DGKI 2.692 0.912 0.977 - - - 0.803 Mlig455_000837 {REF} {Length: 4065} {TRANSSPLICED} {Pfam: CD36 family [PF01130.23, score=424.4]; Diacylglycerol kinase accessory domain [PF00609.21, score=143.5]; Diacylglycerol kinase catalytic domain [PF00781.26, score=80.8]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=32.3]} {Human: ENSG00000157680, DGKI, diacylglycerol kinase iota, [Score=490, Expect=9e-155]; ENSG00000149091, DGKZ, diacylglycerol kinase zeta, [Score=478, Expect=7e-152]} {Mouse: ENSMUSG00000038665, Dgki, diacylglycerol kinase, iota, [Score=490, Expect=4e-157]; ENSMUSG00000040479, Dgkz, diacylglycerol kinase zeta, [Score=478, Expect=6e-152]} {Dmel: FBgn0261549, rdgA, retinal degeneration A, [Score=400, Expect=3e-122]} {Celegans: WBGene00019428, dgk-5, Putative diacylglycerol kinase K06A1.6, [Score=416, Expect=1e-128]} {Smed: dd_Smed_v6_13812_0_1, dd_Smed_v6_13812_0_1, [Score=447, Expect=6e-143]} {RNA1509_47663} {RNA1310_12079.2} {RNA815_4787.1}
24. MligTC455_38809 89 1.85 Mlig455_010159, Mlig455_018689, Mlig455_018690, Mlig455_040237, Mlig455_051161, Mlig455_055776, Mlig455_058202, Mlig455_068783

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-1.196

 2.686 0.852 0.950 - - - 0.884

Mlig455_010159 {REF} {Length: 4808} {Pfam: Integrase zinc binding domain [PF17921.3, score=65.5]; Integrase core domain [PF00665.28, score=45.9]} {RNA1509_12358} {RNA1310_2289} {RNA815_3168.1}

Mlig455_018689 {REF} {Length: 383} {Pfam: Zinc knuckle [PF00098.25, score=35.4]} {RNA1509_37828} {RNA1310_12941} {RNA815_12994}

Mlig455_018690 {REF} {Length: 824} {Pfam: Integrase zinc binding domain [PF17921.3, score=66.8]; Integrase core domain [PF00665.28, score=28.1]; H2C2 zinc finger [PF09337.12, score=19.0]} {RNA1509_37828} {RNA1310_20398} {RNA815_3168.1}

Mlig455_040237 {REF} {Length: 407} {Pfam: Integrase core domain [PF00665.28, score=27.8]} {RNA1509_12358} {RNA1310_2289} {RNA815_3168.1}

Mlig455_051161 {REF} {Length: 2606} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=99.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=81.6]; Integrase zinc binding domain [PF17921.3, score=64.8]; Integrase core domain [PF00665.28, score=48.7]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=117, Expect=5e-27]} {RNA1509_37828} {RNA1310_2289} {RNA815_3168.1}

Mlig455_055776 {REF} {Length: 4218} {Pfam: Integrase zinc binding domain [PF17921.3, score=59.5]; Integrase core domain [PF00665.28, score=49.2]} {RNA1509_12358} {RNA1310_2289, RNA1509_12358} {RNA1509_12358, RNA815_3168.1}

Mlig455_058202 {REF} {Length: 1723} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=42.0]; Aspartyl protease [PF13650.8, score=31.2]; gag-polyprotein putative aspartyl protease [PF13975.8, score=28.1]; Zinc knuckle [PF00098.25, score=27.2]; Aspartyl protease [PF09668.12, score=20.1]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=101, Expect=3e-22]} {RNA1509_12358} {RNA1310_2927} {RNA815_12994}

Mlig455_068783 {REF} {Length: 3243} {Pfam: Aspartyl protease [PF13650.8, score=29.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=27.5]; Aspartyl protease [PF09668.12, score=23.3]} {RNA1509_12358} {RNA1310_2927} {RNA815_12994}
25. MligTC455_19353 539 11.22 Mlig455_066672

Neo: Irradiation

Age: Up-Down-Up

Region-specific R4: 5.661

Region-enriched R4: 4.406/0.00000

Regeneration-downregulated R4: -2.698

Regeneration-depleted R4: -2.698

 2.676 0.936 0.966 - - 0.774 - Mlig455_066672 {REF} {Length: 1497} {RNA1509_15209} {RNA1310_58969, RNA1509_15209} {RNA1509_15209, RNA815_30225}
26. MligTC455_39144 127 2.64 Mlig455_036039, Mlig455_036130, Mlig455_036165, Mlig455_071153

Neo: Irradiation

Age: Up-Down-Down

 2.675 0.906 0.951 - - - 0.818

Mlig455_036039 {REF} {Length: 820} {NoTransDecoderORF} {RNA1310_66203.1} {RNA815_34104}

Mlig455_036130 {REF} {Length: 2044} {RNA1310_66203.1} {RNA815_34104}

Mlig455_036165 {REF} {Length: 820} {NoTransDecoderORF} {RNA1310_66203.1} {RNA815_34104}

Mlig455_071153 {REF} {Length: 687} {RNA1310_82360} {RNA815_42640}
27. MligTC455_23385 215 4.48 Mlig455_004495

Neo: -

Age: Up-Down-Down

Region-specific R4: 4.997

Region-enriched R4: 3.186/0.00003

 2.672 0.928 0.966 - - - 0.778 Mlig455_004495 {REF} {Length: 2364} {Pfam: Homeodomain-like domain [PF13565.8, score=21.7]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=42.4, Expect=6e-06]} {RNA1509_21915} {RNA1310_9985} {RNA815_5533.1}
28. MligTC455_07690 319 6.66 Mlig455_010122, Mlig455_010224

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.539

Region-specific R4: 5.019

Region-enriched R4: 4.446/0.00000

 2.667 0.951 0.951 - - - 0.765

Mlig455_010122 {REF} {Length: 1585} {RNA1509_25591, RNA1509_3284} {RNA1310_12112, RNA1509_25591} {RNA1509_25591, RNA815_12301.2}

Mlig455_010224 {REF} {Length: 1287} {RNA1509_3284} {RNA1310_12112} {RNA815_12301.2}
29. MligTC455_29851 54 1.13 Mlig455_051234

Neo: Irradiation

Age: logFC(26M/2M)=-1.035

 2.666 0.958 0.960 - - - 0.748 Mlig455_051234 {REF} {Length: 2048} {RNA1310_14012} {RNA815_30076}
30. MligTC455_39095 154 3.22 Mlig455_038619

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.580

Region-enriched R4: 2.553/0.00458

 2.662 0.950 0.954 - - 0.758 - Mlig455_038619 {REF} {Length: 2605} {tRNA: Ala(CGC),pseudo, score=20.4} {Pfam: Wnt and FGF inhibitory regulator [PF13908.8, score=25.6]; Adenovirus E3 region protein CR2 [PF02439.17, score=19.0]} {RNA1509_14056} {RNA1310_24477} {RNA815_4998.1}
31. MligTC455_19479 43 0.89 Mlig455_003886

Neo: Germline

Age: -

Region-specific R4: 6.585

Region-enriched R4: 4.389/0.00392

 2.658 0.955 0.975 - - - 0.728 Mlig455_003886 {REF} {Length: 808} {RNA1509_18170} {RNA1310_50142} {RNA815_25360}
32. MligTC455_07609 814 16.96 Mlig455_065903, Mlig455_070028

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 3.357

Region-enriched R4: 2.291/0.00800

 A1CF 2.655 0.883 0.967 - - - 0.805

Mlig455_065903 {REF} {Length: 4282} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=127.1]; RNA recognition motif [PF16367.7, score=20.9]} {Human: ENSG00000148584, A1CF, APOBEC1 complementation factor, [RH, Score=444, Expect=8e-146]} {Mouse: ENSMUSG00000052595, A1cf, APOBEC1 complementation factor, [RH, Score=432, Expect=3e-141]; ENSMUSG00000070780, Rbm47, RNA binding motif protein 47, [RH, Score=421, Expect=6e-138]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=332, Expect=4e-104]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=276, Expect=5e-82]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [RH, Score=445, Expect=2e-145]} {RNA1509_3951} {RNA1310_4587} {RNA815_9492.1}

Mlig455_070028 {REF} {Length: 4546} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=127.1]; RNA recognition motif [PF16367.7, score=20.9]} {Human: ENSG00000148584, A1CF, APOBEC1 complementation factor, [RH, Score=444, Expect=1e-145]} {Mouse: ENSMUSG00000052595, A1cf, APOBEC1 complementation factor, [RH, Score=432, Expect=2e-141]; ENSMUSG00000070780, Rbm47, RNA binding motif protein 47, [RH, Score=421, Expect=6e-138]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=332, Expect=4e-104]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=276, Expect=4e-82]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [RH, Score=444, Expect=2e-145]} {RNA1509_3951} {RNA1310_4587} {RNA815_9492.1}
33. MligTC455_41009 349 7.27 Mlig455_015118

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.358

Region-specific R4: 5.855

Region-enriched R4: 5.392/0.00000
Region-enriched R1: 5.106/0.00651

Regeneration-downregulated R4: -2.701

Regeneration-depleted R4: -2.701

 PRDX3 2.654 0.940 0.969 0.745 - - - Mlig455_015118 {REF} {Length: 3204} {Pfam: AhpC/TSA family [PF00578.23, score=80.1]; Redoxin [PF08534.12, score=35.1]} {Human: ENSG00000165672, PRDX3, peroxiredoxin 3, [Score=138, Expect=6e-37]} {Mouse: ENSMUSG00000024997, Prdx3, peroxiredoxin 3, [Score=136, Expect=2e-36]} {Dmel: FBgn0036490, CG6888, [Score=134, Expect=3e-36]} {Celegans: WBGene00006434, prdx-2, PeRoxireDoXin, [Score=139, Expect=2e-38]} {Smed: dd_Smed_v6_3517_0_1, dd_Smed_v6_3517_0_1, [Score=148, Expect=7e-42]} {RNA1509_37343, RNA1509_51548} {RNA1310_13283, RNA1509_37343, RNA1509_51548} {RNA1509_37343, RNA1509_51548, RNA815_11937}
34. MligTC455_17290 80 1.66 Mlig455_045654

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.676

Region-enriched R4: 3.109/0.01782

 2.653 0.932 0.961 - - - 0.760 Mlig455_045654 {REF} {Length: 2037} {Pfam: Outer membrane protein (OmpH-like) [PF03938.16, score=19.1]} {RNA1509_31195, RNA1509_49014} {RNA1310_15853.1, RNA1509_49014} {RNA1509_49014, RNA815_11413}
35. MligTC455_39989 67 1.39 Mlig455_010317

Neo: Germline

Age: Down-Up-Down

 2.651 0.932 0.970 - - - 0.749 Mlig455_010317 {REF} {Length: 1175} {RNA1509_30228} {RNA1310_52079} {RNA815_29083.1}
36. MligTC455_18633 329 6.86 Mlig455_069502

Neo: Germline

Age: -

Region-enriched R4: 2.555/0.00734

 2.648 0.933 0.980 - - - 0.735 Mlig455_069502 {REF} {Length: 991} {RNA1509_30220, RNA1509_33475} {RNA1310_1114.1, RNA1509_30220, RNA1509_33475} {RNA1509_30220, RNA1509_33475, RNA815_25133.1}
37. MligTC455_23387 661 13.78 Mlig455_012641, Mlig455_039219, Mlig455_044560

Neo: Int S/G2/M

Age: -

Region-specific R4: 4.357

Region-enriched R4: 2.845/0.00000

 2.645 0.937 0.953 - - - 0.755

Mlig455_012641 {REF} {Length: 3409} {Pfam: Homeodomain-like domain [PF13565.8, score=20.0]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=42.4, Expect=9e-06]} {RNA1509_18910, RNA1509_21915, RNA1509_35410, RNA1509_49138} {RNA1310_9985, RNA1509_18910, RNA1509_21915, RNA1509_35410, RNA1509_49138} {RNA1509_18910, RNA1509_21915, RNA1509_35410, RNA1509_49138, RNA815_5533.1}

Mlig455_039219 {REF} {Length: 2661} {Pfam: Homeodomain-like domain [PF13565.8, score=20.0]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=42.4, Expect=9e-06]} {RNA1509_21915} {RNA1310_9985} {RNA815_5533.1}

Mlig455_044560 {REF} {Length: 2628} {Pfam: Homeodomain-like domain [PF13565.8, score=20.0]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=42.4, Expect=9e-06]} {RNA1509_21915} {RNA1310_9985} {RNA815_5533.1}
38. MligTC455_08451 610 12.7 Mlig455_040784, Mlig455_040837, Mlig455_064619

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 4.649/0.00050

 ITSN1 2.644 0.937 0.976 - - - 0.731

Mlig455_040784 {REF} {Length: 3690} {Pfam: RhoGEF domain [PF00621.22, score=86.4]} {Human: ENSG00000205726, ITSN1, intersectin 1, [Score=73.2, Expect=9e-13]; ENSG00000146426, TIAM2, T cell lymphoma invasion and metastasis 2, [Score=70.5, Expect=6e-12]} {Mouse: ENSMUSG00000022957, Itsn1, intersectin 1 (SH3 domain protein 1A), [Score=73.2, Expect=2e-13]; ENSMUSG00000023800, Tiam2, T cell lymphoma invasion and metastasis 2, [Score=71.2, Expect=3e-12]} {Dmel: FBgn0035574, RhoGEF64C, Rho guanine nucleotide exchange factor at 64C, [Score=135, Expect=1e-32]} {Celegans: WBGene00006468, rhgf-1, RHo Guanine nucleotide exchange Factor, [Score=61.6, Expect=1e-09]} {Smed: dd_Smed_v6_2922_0_1, dd_Smed_v6_2922_0_1, [Score=60.5, Expect=3e-09]} {RNA1509_22763} {RNA1310_48876} {RNA815_25180}

Mlig455_040837 {REF} {Length: 489} {NoTransDecoderORF} {RNA1509_22763} {RNA1310_48876} {RNA815_25180}

Mlig455_064619 {REF} {Length: 555} {RNA1509_22763} {RNA1310_48876, RNA1509_22763} {RNA1509_22763, RNA815_25180}
39. MligTC455_02510 76 1.58 Mlig455_010331

Neo: -

Age: logFC(26M/2M)=-0.357

Region-enriched R4: 4.450/0.00001

 UBC 2.643 0.955 0.846 - - - 0.842 Mlig455_010331 {REF} {Length: 2262} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=60.8]; Ubiquitin family [PF00240.25, score=28.6]; Ubiquitin-like domain [PF14560.8, score=24.1]} {Human: ENSG00000150991, UBC, ubiquitin C, [Score=49.3, Expect=1e-06]; ENSG00000170315, UBB, ubiquitin B, [Score=49.3, Expect=2e-06]} {Mouse: ENSMUSG00000008348, Ubc, ubiquitin C, [Score=49.3, Expect=3e-06]; ENSMUSG00000019505, Ubb, ubiquitin B, [Score=48.1, Expect=1e-05]} {Smed: dd_Smed_v6_458_0_2, dd_Smed_v6_458_0_2, [Score=44.3, Expect=7e-06]} {RNA1509_22361} {RNA1310_28812} {RNA815_12500.1}
40. MligTC455_14732 138 2.89 Mlig455_030404

Neo: Germline

Age: -

Region-specific R4: 4.650

Region-enriched R4: 2.904/0.00100

 2.641 0.942 0.969 - - - 0.730 Mlig455_030404 {REF} {Length: 1299} {RNA1509_11718} {RNA1310_48901} {RNA815_45231}
41. MligTC455_26958 189 3.93 Mlig455_025861

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.270

Region-enriched R4: 3.517/0.00002

 TTLL10 2.64 0.909 0.954 - - - 0.777 Mlig455_025861 {REF} {Length: 2020} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=74.6]; YheC/D like ATP-grasp [PF14398.8, score=25.9]} {Human: ENSG00000162571, TTLL10, tubulin tyrosine ligase like 10, [Score=81.6, Expect=8e-16]} {Mouse: ENSMUSG00000029074, Ttll10, tubulin tyrosine ligase-like family, member 10, [Score=93.2, Expect=6e-20]} {Dmel: FBgn0031853, TTLL3B, Tubulin tyrosine ligase-like 3B, [Score=57.4, Expect=2e-08]} {Celegans: WBGene00014232, ttll-4, Tubulin polyglutamylase ttll-4, [Score=50.8, Expect=1e-06]} {Smed: dd_Smed_v6_9664_0_1, dd_Smed_v6_9664_0_1, [Score=94.0, Expect=2e-20]} {RNA1509_34167, RNA1509_9761} {RNA1310_8353, RNA1509_34167} {RNA1509_34167, RNA815_12498}
42. MligTC455_38610 362 7.54 Mlig455_047153, Mlig455_047229, Mlig455_047239, Mlig455_047296

Neo: Germline

Age: Up-Down-Up

Region-enriched R4: 6.287/0.00002

 2.639 0.938 0.983 - - - 0.718

Mlig455_047153 {REF} {Length: 888} {RNA1509_37959} {RNA1310_11667.2} {RNA815_25551}

Mlig455_047229 {REF} {Length: 856} {RNA1509_37959} {RNA1310_11667.2} {RNA815_25551}

Mlig455_047239 {REF} {Length: 4434} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=86.5]} {Smed: dd_Smed_v6_13734_0_18, dd_Smed_v6_13734_0_18, [Score=68.2, Expect=4e-12]} {RNA1509_37959} {RNA1310_11667.2} {RNA815_25551}

Mlig455_047296 {REF} {Length: 4115} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=84.2]; Endonuclease-reverse transcriptase [PF14529.8, score=48.2]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=27.5]} {Smed: dd_Smed_v6_13734_0_20, dd_Smed_v6_13734_0_20, [Score=68.2, Expect=8e-12]} {RNA1509_37959} {RNA1310_11667.2} {RNA815_25551}
43. MligTC455_22261 210 4.39 Mlig455_045581

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.819

Region-enriched R4: 3.801/0.00012

 2.636 0.921 0.966 - - - 0.749 Mlig455_045581 {REF} {Length: 2273} {TRANSSPLICED} {RNA1509_16939, RNA1509_50321} {RNA1310_6791.1, RNA1509_16939, RNA1509_50321} {RNA1509_16939, RNA1509_50321, RNA815_4816.1}
44. MligTC455_29009 274 5.71 Mlig455_052776, Mlig455_069081

Neo: -

Age: -

Region-specific R4: 4.378

Region-enriched R4: 2.453/0.02329

 2.636 0.951 0.899 - - - 0.786

Mlig455_052776 {REF} {Length: 1088} {Pfam: Integrase zinc binding domain [PF17921.3, score=47.4]} {RNA1509_52755} {RNA1310_22009.3} {RNA815_37824}

Mlig455_069081 {REF} {Length: 2633} {Pfam: Integrase zinc binding domain [PF17921.3, score=47.8]; gag-polyprotein putative aspartyl protease [PF13975.8, score=37.2]; Aspartyl protease [PF13650.8, score=34.0]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=49.3, Expect=2e-06]} {RNA1509_52755} {RNA1310_2440.1} {RNA815_32614}
45. MligTC455_18062 708 14.76 Mlig455_000839

Neo: Germline

Age: logFC(26M/2M)=-0.621

Region-specific R4: 5.196

Region-enriched R4: 4.161/0.00001

 2.635 0.930 0.961 - - - 0.744 Mlig455_000839 {REF} {Length: 596} {NoTransDecoderORF} {RNA1509_5721} {RNA1310_74198} {RNA815_38196}
46. MligTC455_22759 58 1.21 Mlig455_031858, Mlig455_031943

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 3.889/0.04990

 TACR2 2.633 0.899 0.968 - - - 0.766

Mlig455_031858 {REF} {Length: 2775} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=104.0]} {Human: ENSG00000075073, TACR2, tachykinin receptor 2, [Score=90.1, Expect=8e-19]; ENSG00000185149, NPY2R, neuropeptide Y receptor Y2, [Score=86.7, Expect=8e-18]; ENSG00000134817, APLNR, apelin receptor, [Score=86.3, Expect=1e-17]} {Mouse: ENSMUSG00000020081, Tacr2, tachykinin receptor 2, [Score=92.8, Expect=6e-20]; ENSMUSG00000028004, Npy2r, neuropeptide Y receptor Y2, [Score=89.4, Expect=7e-19]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=150, Expect=2e-39]} {Celegans: WBGene00016110, npr-11, Putative neuropeptide Y receptor 11, [Score=124, Expect=6e-31]} {Smed: dd_Smed_v6_17752_0_1, dd_Smed_v6_17752_0_1, [Score=189, Expect=2e-54]} {RNA1310_31527}

Mlig455_031943 {REF} {Length: 2929} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=101.5]} {Human: ENSG00000075073, TACR2, tachykinin receptor 2, [Score=90.9, Expect=4e-19]; ENSG00000185149, NPY2R, neuropeptide Y receptor Y2, [Score=89.0, Expect=1e-18]} {Mouse: ENSMUSG00000020081, Tacr2, tachykinin receptor 2, [Score=93.6, Expect=3e-20]; ENSMUSG00000028004, Npy2r, neuropeptide Y receptor Y2, [Score=91.7, Expect=1e-19]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=152, Expect=2e-40]} {Celegans: WBGene00016110, npr-11, Putative neuropeptide Y receptor 11, [Score=123, Expect=1e-30]} {Smed: dd_Smed_v6_17752_0_1, dd_Smed_v6_17752_0_1, [Score=191, Expect=2e-55]} {RNA1310_31527}
47. MligTC455_15947 262 5.46 Mlig455_000214, Mlig455_058474

Neo: Germline

Age: -

Region-specific R4: 4.771

Region-enriched R4: 4.541/0.00000

 2.632 0.908 0.978 - - - 0.746

Mlig455_000214 {REF} {Length: 944} {RNA1509_31034} {RNA1310_45681} {RNA815_25144}

Mlig455_058474 {REF} {Length: 1093} {RNA1509_31034} {RNA1310_45681, RNA1509_31034} {RNA1509_31034, RNA815_25144}
48. MligTC455_02559 41 0.86 Mlig455_066179

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.696

 C17orf97 2.632 0.938 0.979 - - - 0.715 Mlig455_066179 {REF} {Length: 1909} {Human: ENSG00000187624, C17orf97, chromosome 17 open reading frame 97, [Score=49.3, Expect=9e-06]; ENSG00000283985, C17orf97, chromosome 17 open reading frame 97, [Score=49.3, Expect=9e-06]} {Dmel: FBgn0261793, Trf2, TATA box binding protein-related factor 2, [Score=55.8, Expect=6e-08]} {Celegans: WBGene00017794, mltn-13, MLt-TeN (Mlt-10) related, [Score=65.5, Expect=3e-11]} {RNA1509_6604} {RNA1310_12860.1} {RNA815_50729}
49. MligTC455_27089 171 3.56 Mlig455_015007

Neo: Germline

Age: -

Region-specific R4: 5.070

Region-enriched R4: 3.820/0.00012

 2.628 0.941 0.972 - - - 0.715 Mlig455_015007 {REF} {Length: 2788} {RNA1509_28630} {RNA1310_21930.1} {RNA815_9792}
50. MligTC455_31443 223 4.65 Mlig455_051505

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.613

 PDE7A 2.628 0.947 0.966 - - - 0.715 Mlig455_051505 {REF} {Length: 2631} {Pfam: 3'5'-cyclic nucleotide phosphodiesterase [PF00233.21, score=171.1]} {Human: ENSG00000205268, PDE7A, phosphodiesterase 7A, [Score=140, Expect=9e-36]; ENSG00000171408, PDE7B, phosphodiesterase 7B, [Score=137, Expect=2e-34]} {Mouse: ENSMUSG00000019990, Pde7b, phosphodiesterase 7B, [Score=140, Expect=4e-36]; ENSMUSG00000069094, Pde7a, phosphodiesterase 7A, [Score=139, Expect=2e-35]} {Dmel: FBgn0000479, dnc, dunce, [Score=117, Expect=2e-27]} {Celegans: WBGene00020114, pde-4, Probable 3',5'-cyclic phosphodiesterase pde-4, [Score=107, Expect=2e-24]} {Smed: dd_Smed_v6_20355_0_1, dd_Smed_v6_20355_0_1, [Score=161, Expect=1e-44]} {RNA1509_7223} {RNA1310_12032.1} {RNA815_6602.1}
51. MligTC455_07824 62 1.29 Mlig455_062727

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 4.060/0.00566

 2.626 0.872 0.968 - - - 0.786 Mlig455_062727 {REF} {Length: 1470} {NoTransDecoderORF} {RNA1509_14257} {RNA1310_58593} {RNA815_21085.1}
52. MligTC455_53698 115 2.39 Mlig455_013373, Mlig455_054833

Neo: Germline

Age: logFC(26M/2M)=-0.811

Region-specific R4: 6.106

 2.626 0.944 0.963 - - - 0.719

Mlig455_013373 {REF} {Length: 1376} {Pfam: THAP domain [PF05485.14, score=40.7]} {RNA1509_58410} {RNA1310_37810} {RNA815_17175}

Mlig455_054833 {REF} {Length: 318} {NoTransDecoderORF} {RNA1509_10052} {RNA1310_14804} {RNA815_8889}
53. MligTC455_06080 118 2.45 Mlig455_028177, Mlig455_028248

Neo: Germline

Age: -

Region-specific R4: 6.764

Region-enriched R4: 3.549/0.00010

 2.625 0.940 0.956 - - - 0.729

Mlig455_028177 {REF} {Length: 841} {NoTransDecoderORF} {RNA1509_56870} {RNA1310_45405} {RNA815_31063}

Mlig455_028248 {REF} {Length: 886} {RNA1509_51247, RNA1509_56870} {RNA1310_45405, RNA1509_51247, RNA1509_56870} {RNA1509_51247, RNA1509_56870, RNA815_31063}
54. MligTC455_11232 94 1.95 Mlig455_023098

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.902

Region-specific R4: 6.287

Region-enriched R4: 4.229/0.00014

 2.625 0.941 0.970 - - - 0.714 Mlig455_023098 {REF} {Length: 657} {RNA1509_22816} {RNA1310_44682} {RNA815_26712}
55. MligTC455_24119 132 2.75 Mlig455_040160

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.022

 KREMEN2 2.625 0.913 0.964 - - - 0.748 Mlig455_040160 {REF} {Length: 2105} {Pfam: WSC domain [PF01822.21, score=44.9]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=53.5, Expect=1e-08]} {Mouse: ENSMUSG00000040680, Kremen2, kringle containing transmembrane protein 2, [Score=51.2, Expect=6e-08]} {RNA1509_22379, RNA1509_32378, RNA1509_52786, RNA1509_54993} {RNA1310_23240, RNA1509_22379, RNA1509_32378, RNA1509_52786, RNA1509_54993} {RNA1509_22379, RNA1509_32378, RNA1509_52786, RNA1509_54993, RNA815_20861}
56. MligTC455_27276 237 4.95 Mlig455_010491

Neo: Germline

Age: -

Region-specific R4: 6.859

Region-enriched R4: 5.505/0.00000

 2.625 0.954 0.959 - - - 0.712 Mlig455_010491 {REF} {Length: 693} {RNA1509_29479} {RNA1310_58010.2} {RNA815_30333}
57. MligTC455_49415 124 2.58 Mlig455_065684

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.124

 ABCA5 2.625 0.898 0.971 - - - 0.756 Mlig455_065684 {REF} {Length: 6415} {Pfam: ABC transporter [PF00005.29, score=169.7]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=88.6]; ABC-2 family transporter protein [PF12698.9, score=45.0]; RecF/RecN/SMC N terminal domain [PF02463.21, score=37.6]; AAA domain [PF13476.8, score=32.8]; RsgA GTPase [PF03193.18, score=31.9]; AAA ATPase domain [PF13175.8, score=30.7]; P-loop containing region of AAA domain [PF13555.8, score=26.2]; AAA domain [PF13401.8, score=25.0]; 50S ribosome-binding GTPase [PF01926.25, score=24.9]; AAA domain [PF13604.8, score=23.8]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=21.7]; AAA ATPase domain [PF13191.8, score=21.7]; CobW/HypB/UreG, nucleotide-binding domain [PF02492.21, score=21.3]; Threonylcarbamoyl adenosine biosynthesis protein TsaE [PF02367.19, score=21.0]; Domain of unknown function (DUF4162) [PF13732.8, score=20.9]; AAA domain [PF13671.8, score=20.3]; Double-GTPase 2 [PF19993.1, score=18.9]; Molybdopterin guanine dinucleotide synthesis protein B [PF03205.16, score=18.5]} {Human: ENSG00000154265, ABCA5, ATP binding cassette subfamily A member 5, [Score=227, Expect=3e-59]; ENSG00000144452, ABCA12, ATP binding cassette subfamily A member 12, [Score=225, Expect=2e-58]; ENSG00000141338, ABCA8, ATP binding cassette subfamily A member 8, [Score=223, Expect=4e-58]; ENSG00000179869, ABCA13, ATP binding cassette subfamily A member 13, [Score=219, Expect=2e-58]} {Mouse: ENSMUSG00000018800, Abca5, ATP-binding cassette, sub-family A (ABC1), member 5, [Score=228, Expect=1e-59]; ENSMUSG00000041797, Abca9, ATP-binding cassette, sub-family A (ABC1), member 9, [Score=224, Expect=2e-58]; ENSMUSG00000062017, Abca14, ATP-binding cassette, sub-family A (ABC1), member 14, [Score=223, Expect=3e-58]; ENSMUSG00000050296, Abca12, ATP-binding cassette, sub-family A (ABC1), member 12, [Score=221, Expect=4e-57]; ENSMUSG00000041828, Abca8a, ATP-binding cassette, sub-family A (ABC1), member 8a, [Score=218, Expect=1e-56]} {Dmel: FBgn0031170, CG1718, [Score=196, Expect=4e-50]} {Celegans: WBGene00000020, abt-2, ABC Transporter family, [Score=214, Expect=2e-55]} {Smed: dd_Smed_v6_2300_0_8, dd_Smed_v6_2300_0_8, [Score=221, Expect=5e-58]} {RNA1509_6118} {RNA1310_1067, RNA1509_6118} {RNA1509_6118, RNA815_435}
58. MligTC455_10689 294 6.13 Mlig455_004212

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.123

Region-enriched R4: 4.804/0.00000

Regeneration-downregulated R4: -2.854

Regeneration-depleted R4: -2.854

 2.623 0.933 0.970 - - - 0.720 Mlig455_004212 {REF} {Length: 1139} {Pfam: Rdx family [PF10262.11, score=20.0]} {RNA1509_7187} {RNA1310_33606, RNA1509_7187} {RNA1509_7187, RNA815_15969}
59. MligTC455_26140 53 1.11 Mlig455_009901, Mlig455_009903

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 4.764/0.00706

 2.623 0.932 0.963 - - - 0.728

Mlig455_009901 {REF} {Length: 1856} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=58.9]; Capsular polysaccharide synthesis protein [PF05704.14, score=19.0]} {Smed: dd_Smed_v6_6819_0_2, dd_Smed_v6_6819_0_2, [Score=129, Expect=1e-34]} {RNA1509_29382} {RNA1310_7201} {RNA815_5886.2}

Mlig455_009903 {REF} {Length: 1723} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=58.9]; Capsular polysaccharide synthesis protein [PF05704.14, score=19.0]} {Smed: dd_Smed_v6_6819_0_1, dd_Smed_v6_6819_0_1, [Score=129, Expect=9e-35]} {RNA1509_29382} {RNA1310_7201} {RNA815_5886.2}
60. MligTC455_32316 183 3.82 Mlig455_033628, Mlig455_033724

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.763

Region-enriched R4: 3.322/0.00002

 KCTD1 2.623 0.962 0.859 - - - 0.802

Mlig455_033628 {REF} {Length: 2912} {Pfam: Phage integrase family [PF00589.24, score=45.7]; Domain of unknown function (DUF3504) [PF12012.10, score=25.4]} {Human: ENSG00000134504, KCTD1, potassium channel tetramerization domain containing 1, [Score=79.3, Expect=5e-15]} {Mouse: ENSMUSG00000036225, Kctd1, potassium channel tetramerisation domain containing 1, [Score=79.0, Expect=4e-15]} {RNA1509_34600} {RNA1310_41340} {RNA815_30639}

Mlig455_033724 {REF} {Length: 2916} {Pfam: Phage integrase family [PF00589.24, score=34.0]} {Mouse: ENSMUSG00000036225, Kctd1, potassium channel tetramerisation domain containing 1, [Score=45.4, Expect=1e-05]} {RNA1509_34600} {RNA1310_41340, RNA1509_34600} {RNA1509_34600, RNA815_30639}
61. MligTC455_08705 270 5.62 Mlig455_002339

Neo: Germline

Age: -

Region-specific R4: 4.577

Region-enriched R4: 2.874/0.00007

 2.622 0.950 0.964 - - - 0.708 Mlig455_002339 {REF} {Length: 3168} {RNA1509_15296, RNA1509_35859} {RNA1310_6546.1, RNA1509_15296, RNA1509_35859} {RNA1509_15296, RNA1509_35859, RNA815_9556}
62. MligTC455_21286 447 9.31 Mlig455_004286, Mlig455_004360

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.448

Region-specific R4: 5.908

Region-enriched R4: 2.387/0.01220

 2.622 0.925 0.975 - - - 0.722

Mlig455_004286 {REF} {Length: 1958} {RNA1509_28807, RNA1509_44927} {RNA1310_15297.1, RNA1509_44927} {RNA1509_44927, RNA815_30441}

Mlig455_004360 {REF} {Length: 1833} {RNA1509_28807} {RNA1310_15297.1} {RNA815_37116}
63. MligTC455_15936 241 5.02 Mlig455_049497

Neo: Germline

Age: Up-Down-Up

Region-specific R4: 5.263

Region-enriched R4: 3.004/0.00040

 2.62 0.947 0.959 - - - 0.714 Mlig455_049497 {REF} {Length: 3730} {Pfam: Laminin G domain [PF02210.26, score=39.5]; Laminin G domain [PF00054.25, score=18.9]} {RNA1509_52004, RNA1509_7003} {RNA1310_5152.1, RNA1509_52004} {RNA1509_52004, RNA815_3676}
64. MligTC455_40206 86 1.78 Mlig455_059439

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.689

Region-enriched R4: 2.922/0.02473

 2.62 0.920 0.973 - - - 0.727 Mlig455_059439 {REF} {Length: 1940} {RNA1509_20476, RNA1509_54675} {RNA1310_19483, RNA1509_54675} {RNA1509_54675, RNA815_26243}
65. MligTC455_12310 74 1.54 Mlig455_029532, Mlig455_043048

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 4.908/0.00056

 ABCA10, ABCA4 2.619 0.905 0.969 - - - 0.745

Mlig455_029532 {REF} {Length: 2122} {Pfam: ABC transporter [PF00005.29, score=59.2]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=31.3]; Osmosensitive K+ channel His kinase sensor domain [PF02702.19, score=18.9]; AAA domain [PF13604.8, score=18.7]} {Human: ENSG00000198691, ABCA4, ATP binding cassette subfamily A member 4, [Score=106, Expect=7e-25]; ENSG00000167972, ABCA3, ATP binding cassette subfamily A member 3, [Score=106, Expect=7e-25]; ENSG00000154265, ABCA5, ATP binding cassette subfamily A member 5, [Score=106, Expect=5e-25]; ENSG00000165029, ABCA1, ATP binding cassette subfamily A member 1, [Score=104, Expect=3e-24]; ENSG00000107331, ABCA2, ATP binding cassette subfamily A member 2, [Score=104, Expect=4e-24]; ENSG00000064687, ABCA7, ATP binding cassette subfamily A member 7, [Score=102, Expect=2e-23]} {Mouse: ENSMUSG00000028125, Abca4, ATP-binding cassette, sub-family A (ABC1), member 4, [Score=108, Expect=1e-25]; ENSMUSG00000015243, Abca1, ATP-binding cassette, sub-family A (ABC1), member 1, [Score=107, Expect=3e-25]; ENSMUSG00000026944, Abca2, ATP-binding cassette, sub-family A (ABC1), member 2, [Score=105, Expect=7e-25]; ENSMUSG00000035722, Abca7, ATP-binding cassette, sub-family A (ABC1), member 7, [Score=105, Expect=7e-25]} {Dmel: FBgn0031170, CG1718, [Score=100, Expect=3e-23]} {Celegans: WBGene00000020, abt-2, ABC Transporter family, [Score=111, Expect=6e-27]} {Smed: dd_Smed_v6_20782_0_1, dd_Smed_v6_20782_0_1, [Score=94.0, Expect=3e-21]} {RNA1509_47122} {RNA1310_809} {RNA815_234.1}

Mlig455_043048 {REF} {Length: 5566} {Pfam: ABC transporter [PF00005.29, score=175.3]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=76.1]; ABC-2 family transporter protein [PF12698.9, score=36.8]; AAA domain [PF13476.8, score=29.2]; AAA ATPase domain [PF13175.8, score=28.9]; RsgA GTPase [PF03193.18, score=27.3]; P-loop containing region of AAA domain [PF13555.8, score=24.6]; NB-ARC domain [PF00931.24, score=23.9]; AAA domain [PF13401.8, score=23.9]; AAA domain [PF13604.8, score=23.7]; AAA ATPase domain [PF13191.8, score=22.9]; RecF/RecN/SMC N terminal domain [PF02463.21, score=20.8]} {Human: ENSG00000154263, ABCA10, ATP binding cassette subfamily A member 10, [Score=238, Expect=1e-62]; ENSG00000154258, ABCA9, ATP binding cassette subfamily A member 9, [Score=229, Expect=1e-59]} {Mouse: ENSMUSG00000041828, Abca8a, ATP-binding cassette, sub-family A (ABC1), member 8a, [Score=224, Expect=2e-58]; ENSMUSG00000020620, Abca8b, ATP-binding cassette, sub-family A (ABC1), member 8b, [Score=218, Expect=1e-56]} {Dmel: FBgn0031170, CG1718, [Score=186, Expect=6e-47]} {Celegans: WBGene00000421, ced-7, ABC transporter ced-7, [Score=287, Expect=3e-78]} {Smed: dd_Smed_v6_2300_0_6, dd_Smed_v6_2300_0_6, [Score=177, Expect=2e-44]} {RNA1509_6974} {RNA1310_809} {RNA815_234.1}
66. MligTC455_44787 221 4.61 Mlig455_051519, Mlig455_051553

Neo: Germline

Age: -

Region-specific R4: 5.005

Region-enriched R4: 3.993/0.00000

 2.619 0.918 0.974 - - - 0.727

Mlig455_051519 {REF} {Length: 266} {NoTransDecoderORF} {RNA1509_27372} {RNA1310_37298} {RNA815_48049}

Mlig455_051553 {REF} {Length: 4874} {RNA1509_24212} {RNA1310_89207} {RNA815_48049}
67. MligTC455_16239 199 4.15 Mlig455_000436

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.542

 KIFC3 2.617 0.950 0.929 - - - 0.738 Mlig455_000436 {REF} {Length: 3823} {Pfam: Kinesin motor domain [PF00225.25, score=253.7]; Microtubule binding [PF16796.7, score=100.0]; TSC-22/dip/bun family [PF01166.20, score=20.4]} {Human: ENSG00000140859, KIFC3, kinesin family member C3, [Score=200, Expect=1e-54]} {Mouse: ENSMUSG00000031788, Kifc3, kinesin family member C3, [Score=199, Expect=3e-54]} {Dmel: FBgn0004378, Klp61F, Kinesin-like protein at 61F, [Score=166, Expect=2e-42]} {Celegans: WBGene00002216, klp-3, Kinesin-like protein klp-3, [Score=184, Expect=7e-50]} {Smed: dd_Smed_v6_13756_0_3, dd_Smed_v6_13756_0_3, [Score=205, Expect=1e-56]} {RNA1509_9051} {RNA1310_7008, RNA1509_9051} {RNA1509_9051, RNA815_8696}
68. MligTC455_21111 722 15.05 Mlig455_033057

Neo: Germline

Age: logFC(26M/2M)=0.932

Region-specific R4: 6.181

Region-enriched R4: 3.858/0.00000

 2.615 0.956 0.827 0.832 - - - Mlig455_033057 {REF} {Length: 2225} {Pfam: WSC domain [PF01822.21, score=110.5]} {RNA1509_22340} {RNA1310_5464.1} {RNA815_1978.1}
69. MligTC455_51428 755 15.73 Mlig455_028508

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.587

Region-enriched R4: 3.828/0.00001

 2.615 0.944 0.965 - - - 0.706 Mlig455_028508 {REF} {Length: 968} {RNA1509_3823} {RNA1310_33349.1} {RNA815_14887}
70. MligTC455_43806 516 10.75 Mlig455_040280, Mlig455_054682

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 4.893

Region-enriched R4: 3.092/0.00175

 2.614 0.926 0.962 - 0.726 - -

Mlig455_040280 {REF} {Length: 2094} {RNA1509_34342} {RNA1310_18445.1, RNA1509_34342} {RNA1509_34342, RNA815_13631}

Mlig455_054682 {REF} {Length: 2099} {RNA1509_11731, RNA1509_30444, RNA1509_30504, RNA1509_34342} {RNA1310_18445.1, RNA1509_11731, RNA1509_30444, RNA1509_30504} {RNA1509_11731, RNA1509_30444, RNA1509_30504, RNA815_13631}
71. MligTC455_25164 260 5.42 Mlig455_052955

Neo: Irradiation

Age: -

Region-specific R4: 4.920

Region-enriched R4: 3.625/0.00000

 2.613 0.956 0.865 - - - 0.792 Mlig455_052955 {REF} {Length: 1592} {RNA1509_17583, RNA1509_36452} {RNA1310_44647, RNA1509_36452} {RNA1509_36452, RNA815_22309}
72. MligTC455_03976 126 2.63 Mlig455_017286

Neo: Irradiation

Age: -

Region-specific R4: 6.338

Region-enriched R4: 3.931/0.00045

 2.611 0.940 0.965 - - - 0.706 Mlig455_017286 {REF} {Length: 568} {Pfam: RNase H [PF00075.26, score=57.3]} {RNA1509_5045} {RNA1310_667.2} {RNA815_8147}
73. MligTC455_11854 112 2.32 Mlig455_057286

Neo: Irradiation

Age: -

Region-specific R4: 6.358

Region-enriched R4: 5.060/0.00000

 2.611 0.922 0.970 - - - 0.719 Mlig455_057286 {REF} {Length: 793} {RNA1509_33398} {RNA1310_24396.1} {RNA815_21615}
74. MligTC455_16106 297 6.19 Mlig455_070284

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.402

Region-specific R4: 4.874

Region-enriched R4: 2.291/0.00432

 2.611 0.907 0.964 - - - 0.740 Mlig455_070284 {REF} {Length: 2099} {Smed: dd_Smed_v6_22487_0_1, dd_Smed_v6_22487_0_1, [Score=74.7, Expect=6e-15]} {RNA1509_21890, RNA1509_30361, RNA1509_39922, RNA1509_43280, RNA1509_5137} {RNA1310_12762, RNA1509_21890, RNA1509_30361, RNA1509_39922, RNA1509_43280} {RNA1509_21890, RNA1509_30361, RNA1509_39922, RNA1509_43280, RNA815_4528}
75. MligTC455_52204 292 6.09 Mlig455_032828

Neo: Germline

Age: -

Region-specific R4: 5.438

Region-enriched R4: 4.312/0.00000

 2.611 0.952 0.924 - - - 0.735 Mlig455_032828 {REF} {Length: 1745} {NoTransDecoderORF} {RNA1509_20491, RNA1509_58410} {RNA1310_47531, RNA1509_20491, RNA1509_58410} {RNA1509_20491, RNA1509_58410, RNA815_8889}
76. MligTC455_07016 48 1.01 Mlig455_069269

Neo: Germline

Age: -

 2.61 0.922 0.969 - - - 0.719 Mlig455_069269 {REF} {Length: 549} {TRANSSPLICED} {RNA1509_59261} {RNA1310_56270, RNA1509_59261} {RNA1509_59261, RNA815_30228}
77. MligTC455_10188 158 3.29 Mlig455_036444, Mlig455_054350

Neo: Germline

Age: Down-Up-Up, logFC(26M/2M)=0.507

Region-specific R4: 7.341

Region-enriched R4: 6.229/0.00000

 2.61 0.923 0.977 - - - 0.710

Mlig455_036444 {REF} {Length: 707} {Pfam: Dickkopf N-terminal cysteine-rich region [PF04706.14, score=19.7]; Family of unknown function (DUF5885) [PF19232.1, score=19.4]} {RNA1509_54511} {RNA1310_63890, RNA1509_54511} {RNA1509_54511, RNA815_33000}

Mlig455_054350 {REF} {Length: 619} {Pfam: Dickkopf N-terminal cysteine-rich region [PF04706.14, score=18.9]; Family of unknown function (DUF5885) [PF19232.1, score=18.4]} {RNA1509_54511} {RNA1310_63890} {RNA815_33000}
78. MligTC455_11053 159 3.3 Mlig455_039123, Mlig455_039201

Neo: -

Age: -

Region-specific R4: 7.457

Region-enriched R4: 4.745/0.01607

 2.61 0.921 0.962 - - - 0.727

Mlig455_039123 {REF} {Length: 805} {RNA1509_39839} {RNA1310_52743, RNA1509_39839}

Mlig455_039201 {REF} {Length: 715} {NoTransDecoderORF} {RNA1509_39839} {RNA1310_52743}
79. MligTC455_16345 412 8.58 Mlig455_024407

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 4.084

Region-enriched R4: 2.498/0.00111

Regeneration-downregulated R4: -2.680

Regeneration-depleted R4: -2.680

 SH3KBP1 2.61 0.794 0.958 - - 0.858 - Mlig455_024407 {REF} {Length: 2853} {TRANSSPLICED} {Pfam: Variant SH3 domain [PF14604.8, score=110.0]; Variant SH3 domain [PF07653.19, score=84.8]; SH3 domain [PF00018.30, score=84.0]} {Human: ENSG00000147010, SH3KBP1, SH3 domain containing kinase binding protein 1, [Score=94.7, Expect=2e-20]} {Mouse: ENSMUSG00000040990, Sh3kbp1, SH3-domain kinase binding protein 1, [Score=92.8, Expect=8e-20]} {Dmel: FBgn0027598, cindr, CIN85 and CD2AP related, [RH, Score=77.0, Expect=7e-15]} {Celegans: WBGene00021549, Y44E3A.4, [Score=70.5, Expect=7e-13]} {Smed: dd_Smed_v6_1522_0_1, dd_Smed_v6_1522_0_1, [RH, Score=139, Expect=2e-36]} {RNA1509_22359, RNA1509_3398, RNA1509_44142} {RNA1310_6551, RNA1509_22359, RNA1509_3398, RNA1509_44142} {RNA1509_22359, RNA1509_3398, RNA1509_44142, RNA815_17932}
80. MligTC455_24575 375 7.81 Mlig455_002023, Mlig455_002115, Mlig455_002220

Neo: Germline

Age: -

Region-specific R4: 5.777

Region-enriched R4: 3.654/0.00013

 2.61 0.948 0.961 - - - 0.701

Mlig455_002023 {REF} {Length: 811} {RNA1509_54350} {RNA1310_35347} {RNA815_23549.1}

Mlig455_002115 {REF} {Length: 1516} {RNA1509_54350} {RNA1310_35347, RNA1509_54350} {RNA1509_54350, RNA815_23549.1}

Mlig455_002220 {REF} {Length: 815} {RNA1509_54350} {RNA1310_35347} {RNA815_23549.1}
81. MligTC455_28918 98 2.05 Mlig455_006217

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.897

Region-enriched R4: 3.721/0.00747

 PIGW 2.608 0.962 0.944 - - 0.702 - Mlig455_006217 {REF} {Length: 5066} {Pfam: GWT1 [PF06423.14, score=82.4]} {Human: ENSG00000275600, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=98.2, Expect=4e-21]; ENSG00000277161, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=98.2, Expect=4e-21]} {Mouse: ENSMUSG00000045140, Pigw, phosphatidylinositol glycan anchor biosynthesis, class W, [Score=102, Expect=9e-23]} {Dmel: FBgn0031422, PIG-Wa, Phosphatidylinositol glycan anchor biosynthesis class W a, [RH, Score=108, Expect=5e-25]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [Score=105, Expect=4e-24]} {Smed: dd_Smed_v6_14190_0_1, dd_Smed_v6_14190_0_1, [RH, Score=106, Expect=1e-24]} {RNA1509_28166} {RNA1310_10267.1} {RNA815_4044}
82. MligTC455_49562 89 1.84 Mlig455_016117

Neo: Germline

Age: -

Region-specific R4: 6.399

 2.608 0.948 0.954 - - - 0.706 Mlig455_016117 {REF} {Length: 2757} {Pfam: Thrombospondin type 1 domain [PF00090.21, score=27.3]; Spondin-like TSP1 domain [PF19028.2, score=22.7]} {Smed: dd_Smed_v6_20221_0_1, dd_Smed_v6_20221_0_1, [Score=72.0, Expect=3e-13]} {RNA1509_33920} {RNA1310_11908} {RNA815_5322}
83. MligTC455_21268 992 20.66 Mlig455_028661, Mlig455_028671

Neo: Irradiation

Age: Down-Up-Up, logFC(26M/2M)=1.053

Region-specific R4: 5.373

Region-enriched R4: 2.719/0.00257

 2.607 0.947 0.957 - - - 0.703

Mlig455_028661 {REF} {Length: 574} {Pfam: WSC domain [PF01822.21, score=35.1]} {RNA1509_14930} {RNA1310_36829} {RNA815_24884}

Mlig455_028671 {REF} {Length: 576} {Pfam: WSC domain [PF01822.21, score=34.4]} {RNA1509_14930} {RNA1310_36829} {RNA815_24884}
84. MligTC455_22117 447 9.32 Mlig455_012151, Mlig455_028946

Neo: Germline

Age: -

Region-specific R4: 5.270

Region-enriched R4: 3.340/0.00007

 2.605 0.956 0.938 - - - 0.711

Mlig455_012151 {REF} {Length: 2504} {RNA1509_26155} {RNA1310_11584, RNA1509_26155} {RNA1509_26155, RNA815_4599.1}

Mlig455_028946 {REF} {Length: 2224} {RNA1509_26155} {RNA1310_11584} {RNA815_4599.2}
85. MligTC455_11423 415 8.65 Mlig455_005060

Neo: -

Age: Up-Down-Up

Region-specific R4: 6.406

Region-enriched R4: 4.720/0.00014

 2.604 0.927 0.953 - - - 0.724 Mlig455_005060 {REF} {Length: 1169} {Pfam: Thioredoxin [PF00085.22, score=45.3]} {RNA1509_26647} {RNA1310_42837} {RNA815_27656.1}
86. MligTC455_16314 29 0.6 Mlig455_056438

Neo: -

Age: -

Region-enriched R4: 4.004/0.00573

 ANGPTL2 2.604 0.853 0.967 - - - 0.784 Mlig455_056438 {REF} {Length: 3716} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=122.7]} {Human: ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=105, Expect=5e-25]; ENSG00000171557, FGG, fibrinogen gamma chain, [Score=103, Expect=2e-24]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=101, Expect=1e-23]; ENSG00000101280, ANGPT4, angiopoietin 4, [Score=101, Expect=8e-24]} {Mouse: ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=104, Expect=6e-25]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=104, Expect=5e-25]; ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=101, Expect=6e-24]; ENSMUSG00000033860, Fgg, fibrinogen gamma chain, [Score=100, Expect=2e-23]} {Dmel: FBgn0033312, CG8642, [Score=89.7, Expect=5e-20]} {Celegans: WBGene00017013, ensh-1, [Score=59.3, Expect=8e-10]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=80.1, Expect=8e-17]} {RNA1509_28467} {RNA1310_29813.1} {RNA815_32357.1}
87. MligTC455_27486 48 1.01 Mlig455_040202

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.604

 2.604 0.875 0.960 - - 0.769 - Mlig455_040202 {REF} {Length: 2541} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=106.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=102.0]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=52.0, Expect=7e-07]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=52.0, Expect=7e-07]} {Smed: dd_Smed_v6_26921_0_1, dd_Smed_v6_26921_0_1, [Score=117, Expect=5e-32]} {RNA1509_56078} {RNA1310_617} {RNA815_3663}
88. MligTC455_10830 366 7.63 Mlig455_019653, Mlig455_048055, Mlig455_048075

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.268

Region-specific R4: 6.596

Region-enriched R4: 5.277/0.00003

 2.602 0.954 0.937 - - - 0.711

Mlig455_019653 {REF} {Length: 2478} {RNA1509_31954} {RNA1310_9515.1} {RNA815_20880}

Mlig455_048055 {REF} {Length: 2719} {RNA1509_31954} {RNA1310_9015} {RNA815_20880}

Mlig455_048075 {REF} {Length: 2358} {RNA1509_31954} {RNA1310_9515.1} {RNA815_20880}
89. MligTC455_13613 133 2.77 Mlig455_047175, Mlig455_048504

Neo: Germline

Age: Up-Down-Down

 2.602 0.928 0.969 - - - 0.705

Mlig455_047175 {REF} {Length: 967} {RNA1310_43089} {RNA815_23666}

Mlig455_048504 {REF} {Length: 949} {RNA1310_43089} {RNA815_23666}
90. MligTC455_40636 138 2.87 Mlig455_069949

Neo: Int S/G2/M

Age: Up-Down-Down

Region-enriched R4: 3.046/0.00112

 CORO1B 2.602 0.866 0.971 - - - 0.765 Mlig455_069949 {REF} {Length: 1903} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF1899) [PF08953.13, score=89.7]; Type of WD40 repeat [PF16300.7, score=62.5]; WD domain, G-beta repeat [PF00400.34, score=35.4]} {Human: ENSG00000172725, CORO1B, coronin 1B, [Score=386, Expect=4e-129]; ENSG00000110880, CORO1C, coronin 1C, [Score=381, Expect=2e-127]; ENSG00000167549, CORO6, coronin 6, [Score=380, Expect=4e-127]; ENSG00000102879, CORO1A, coronin 1A, [Score=379, Expect=1e-126]} {Mouse: ENSMUSG00000097771, Coro1b, coronin, actin binding protein 1B, [Score=392, Expect=1e-131]; ENSMUSG00000024835, Coro1b, coronin, actin binding protein 1B, [Score=392, Expect=1e-131]; ENSMUSG00000030707, Coro1a, coronin, actin binding protein 1A, [Score=385, Expect=5e-129]; ENSMUSG00000004530, Coro1c, coronin, actin binding protein 1C, [Score=381, Expect=2e-127]; ENSMUSG00000020836, Coro6, coronin 6, [Score=377, Expect=5e-126]} {Dmel: FBgn0265935, coro, [Score=398, Expect=2e-133]} {Celegans: WBGene00000768, cor-1, Coronin-like protein cor-1, [Score=331, Expect=4e-108]} {Smed: dd_Smed_v6_448_0_1, dd_Smed_v6_448_0_1, [Score=417, Expect=5e-141]} {RNA1509_25447} {RNA1310_10454} {RNA815_24217}
91. MligTC455_14705 505 10.53 Mlig455_028104

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.268

Region-specific R4: 5.978

Region-enriched R4: 3.847/0.00000

 2.601 0.950 0.945 - - - 0.706 Mlig455_028104 {REF} {Length: 1177} {RNA1509_6140} {RNA1310_34908} {RNA815_22658}
92. MligTC455_27088 89 1.84 Mlig455_014882

Neo: Germline

Age: Up-Down-Up

Region-specific R4: 6.486

Region-enriched R4: 2.783/0.04154

 2.601 0.904 0.968 - - - 0.729 Mlig455_014882 {REF} {Length: 1528} {RNA1509_28630} {RNA1310_21930.1, RNA1509_28630} {RNA1509_28630, RNA815_9792}
93. MligTC455_22017 420 8.76 Mlig455_051116

Neo: Irradiation

Age: Up-Down-Up

Region-specific R4: 5.568

Region-enriched R4: 4.568/0.00000

 2.599 0.899 0.959 - - - 0.741 Mlig455_051116 {REF} {Length: 1861} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=61.5]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=120, Expect=4e-29]} {RNA1509_27295} {RNA1310_18835.1} {RNA815_7903.1}
94. MligTC455_18063 302 6.28 Mlig455_057166

Neo: -

Age: -

Region-specific R4: 6.440

Region-enriched R4: 4.928/0.00000

Regeneration-downregulated R4: -2.795

Regeneration-depleted R4: -2.795

 2.599 0.941 0.951 - - - 0.707 Mlig455_057166 {REF} {Length: 430} {NoTransDecoderORF} {RNA1509_5721} {RNA1310_74198} {RNA815_38196}
95. MligTC455_23484 3490 72.7 Mlig455_010547, Mlig455_061788, Mlig455_061828

Neo: Germline

Age: -

Region-specific R4: 5.178

Region-enriched R4: 4.109/0.00000

Regeneration-downregulated R4: -2.976

Regeneration-depleted R4: -2.976

 SRI 2.599 0.939 0.953 - - - 0.707

Mlig455_010547 {REF} {Length: 2009} {Pfam: EF hand [PF00036.34, score=44.0]; EF-hand domain [PF13405.8, score=40.5]; EF-hand domain pair [PF13499.8, score=32.8]; EF hand [PF13202.8, score=25.4]} {Human: ENSG00000075142, SRI, sorcin, [Score=121, Expect=5e-34]; ENSG00000115271, GCA, grancalcin, [Score=119, Expect=1e-32]} {Mouse: ENSMUSG00000003161, Sri, sorcin, [RH, Score=119, Expect=5e-33]} {Dmel: FBgn0086378, Alg-2, Apoptosis-linked gene-2, [Score=78.6, Expect=6e-18]} {Celegans: WBGene00019770, M04F3.4, [Score=76.6, Expect=3e-17]} {Smed: dd_Smed_v6_3585_0_1, dd_Smed_v6_3585_0_1, [Score=90.1, Expect=2e-22]} {RNA1509_11825, RNA1509_50965} {RNA1310_25008.1, RNA1509_50965} {RNA1509_50965, RNA815_8403.2}

Mlig455_061788 {REF} {Length: 2113} {Pfam: EF hand [PF00036.34, score=40.8]; EF-hand domain [PF13405.8, score=36.0]; EF-hand domain pair [PF13499.8, score=32.1]; EF hand [PF13202.8, score=25.4]; EF-hand domain pair [PF13833.8, score=19.6]} {Human: ENSG00000075142, SRI, sorcin, [RH, Score=118, Expect=5e-33]} {Mouse: ENSMUSG00000003161, Sri, sorcin, [Score=117, Expect=2e-32]; ENSMUSG00000026893, Gca, grancalcin, [Score=115, Expect=4e-31]} {Smed: dd_Smed_v6_1457_0_1, dd_Smed_v6_1457_0_1, [Score=86.3, Expect=5e-21]} {RNA1509_19096, RNA1509_29326, RNA1509_6611, RNA1509_7662} {RNA1310_25492.1, RNA1509_19096, RNA1509_29326, RNA1509_6611, RNA1509_7662} {RNA1509_19096, RNA1509_29326, RNA1509_6611, RNA1509_7662, RNA815_8403.2}

Mlig455_061828 {REF} {Length: 2105} {Pfam: EF hand [PF00036.34, score=40.8]; EF-hand domain [PF13405.8, score=36.0]; EF-hand domain pair [PF13499.8, score=32.1]; EF hand [PF13202.8, score=25.4]; EF-hand domain pair [PF13833.8, score=19.6]} {Human: ENSG00000075142, SRI, sorcin, [RH, Score=118, Expect=5e-33]} {Mouse: ENSMUSG00000003161, Sri, sorcin, [Score=117, Expect=2e-32]; ENSMUSG00000026893, Gca, grancalcin, [Score=115, Expect=4e-31]} {Smed: dd_Smed_v6_1457_0_1, dd_Smed_v6_1457_0_1, [Score=86.3, Expect=5e-21]} {RNA1509_7662} {RNA1310_25492.1} {RNA815_8403.2}
96. MligTC455_49242 474 9.87 Mlig455_022874

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.285

Region-specific R4: 5.891

Region-enriched R4: 3.048/0.00000

 2.599 0.953 0.935 - - - 0.711 Mlig455_022874 {REF} {Length: 2657} {Pfam: Uncharacterized protein conserved in bacteria (DUF2076) [PF09849.11, score=18.7]} {RNA1509_26629, RNA1509_31383, RNA1509_36955, RNA1509_57802, RNA1509_6217} {RNA1310_9702.1, RNA1509_26629, RNA1509_31383, RNA1509_36955, RNA1509_57802, RNA1509_6217} {RNA1509_26629, RNA1509_31383, RNA1509_36955, RNA1509_57802, RNA1509_6217, RNA815_4174}
97. MligTC455_51000 198 4.12 Mlig455_049960

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.562

Region-enriched R4: 4.208/0.00007

 2.599 0.916 0.972 - - - 0.711 Mlig455_049960 {REF} {Length: 1570} {RNA1509_26603} {RNA1310_40732.3, RNA1509_26603} {RNA1509_26603, RNA815_27303.1}
98. MligTC455_24334 77 1.59 Mlig455_069413

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 2.672/0.01641

 2.598 0.863 0.975 - - - 0.760 Mlig455_069413 {REF} {Length: 2674} {Smed: dd_Smed_v6_20221_0_2, dd_Smed_v6_20221_0_2, [RH, Score=62.8, Expect=1e-10]} {RNA1509_44068} {RNA1310_9316} {RNA815_2582.1}
99. MligTC455_24426 260 5.41 Mlig455_001476, Mlig455_006840, Mlig455_006902, Mlig455_055103, Mlig455_055149

Neo: Germline

Age: logFC(26M/2M)=0.491

Region-specific R4: 7.022

Region-enriched R4: 8.137/0.00000

 2.597 0.876 0.965 - - - 0.756

Mlig455_001476 {REF} {Length: 1393} {NoTransDecoderORF} {RNA1509_42119} {RNA1310_39896.2} {RNA815_33608}

Mlig455_006840 {REF} {Length: 1356} {NoTransDecoderORF} {RNA1509_42119} {RNA1310_44250} {RNA815_33608}

Mlig455_006902 {REF} {Length: 723} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_42119} {RNA1310_37253} {RNA815_16973}

Mlig455_055103 {REF} {Length: 2635} {Pfam: Winged helix-turn helix [PF13551.8, score=31.5]; DDE superfamily endonuclease [PF13358.8, score=29.2]; Homeodomain-like domain [PF13384.8, score=27.2]; Helix-turn-helix domain [PF13518.8, score=26.7]; Helix-turn-helix domain of resolvase [PF02796.17, score=20.5]} {Smed: dd_Smed_v6_16239_0_2, dd_Smed_v6_16239_0_2, [Score=63.9, Expect=3e-12]} {RNA1509_42119} {RNA1310_44250} {RNA815_33608}

Mlig455_055149 {REF} {Length: 1470} {NoTransDecoderORF} {RNA1509_42119} {RNA1310_44250} {RNA815_16973}
100. MligTC455_37409 136 2.84 Mlig455_068553

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 2.269/0.01551

 2.597 0.935 0.955 - - - 0.707 Mlig455_068553 {REF} {Length: 4122} {Pfam: Protein of unknown function (DUF753) [PF05444.14, score=19.7]} {RNA1509_51360} {RNA1310_2237.1} {RNA815_726.1}

There are 408 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA