Data search
Results for MligTC455_45200
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_45200 | 334 | 6.96 | Mlig455_061450 | Neo: - Age: - Region-enriched R2: 3.285/0.02913 |
TSR1 | Mlig455_061450 {REF} {Length: 2484} {TRANSSPLICED} {Pfam: 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal [PF04950.14, score=253.3]} {Human: ENSG00000167721, TSR1, TSR1, ribosome maturation factor, [RH, Score=218, Expect=3e-60]} {Mouse: ENSMUSG00000038335, Tsr1, TSR1 20S rRNA accumulation, [RH, Score=223, Expect=4e-62]} {Dmel: FBgn0037073, Tsr1, Tsr1 ribosome assembly factor, [RH, Score=214, Expect=7e-59]} {Celegans: WBGene00006497, tag-151, Pre-rRNA-processing protein TSR1 homolog, [RH, Score=208, Expect=4e-57]} {Smed: dd_Smed_v6_5502_0_1, dd_Smed_v6_5502_0_1, [RH, Score=180, Expect=1e-47]} {RNA1509_16656} {RNA1310_1517} {RNA815_3245} |
Cumulative graph for MligTC455_45200
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.015 | 3.44 | 0.00675 | 0.25291 | |
| RegionR2 | 3.285 | 3.44 | 0.00153 | 0.02913 | |
| RegionR3 | 0.89 | 3.44 | 0.27075 | 0.81519 | |
| RegionR4 | -3.844 | 3.44 | 0.00013 | 0.00193 | |
| RegionR5 | -0.205 | 3.44 | 0.75211 | 1.00000 | |
| RegionR6 | 0.617 | 3.44 | 0.46366 | 1.00000 | |
| RegionR7 | 1.204 | 3.44 | 0.20907 | 0.82230 | |
| RegionR8 | 3.068 | 3.44 | 0.00579 | 0.13788 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.401 | 3.44 | 0.84682 | 1.00000 | |
| RegenerationR2 | 0.725 | 3.44 | 0.45360 | 0.84905 | |
| RegenerationR3 | 1.911 | 3.44 | 0.08342 | 0.47220 | |
| RegenerationR4 | 2.586 | 3.44 | 0.01592 | 0.19739 | |
| RegenerationR5 | 1.638 | 3.44 | 0.10779 | 0.49665 | |
| RegenerationR6 | 1.68 | 3.44 | 0.11209 | 0.41253 | |
| RegenerationBL | -1.26 | 3.44 | 0.36166 | 0.73077 | |
| RegenerationTP | -0.103 | 3.44 | 0.92206 | 1.00000 |
Genes with expression patterns similar to MligTC455_45200
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_45200 | 334 | 6.96 | Mlig455_061450 | Neo: - Age: - Region-enriched R2: 3.285/0.02913 |
TSR1 | 5 | 1.000 | 1.000 | - | 1.000 | 1.000 | 1.000 | Mlig455_061450 {REF} {Length: 2484} {TRANSSPLICED} {Pfam: 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal [PF04950.14, score=253.3]} {Human: ENSG00000167721, TSR1, TSR1, ribosome maturation factor, [RH, Score=218, Expect=3e-60]} {Mouse: ENSMUSG00000038335, Tsr1, TSR1 20S rRNA accumulation, [RH, Score=223, Expect=4e-62]} {Dmel: FBgn0037073, Tsr1, Tsr1 ribosome assembly factor, [RH, Score=214, Expect=7e-59]} {Celegans: WBGene00006497, tag-151, Pre-rRNA-processing protein TSR1 homolog, [RH, Score=208, Expect=4e-57]} {Smed: dd_Smed_v6_5502_0_1, dd_Smed_v6_5502_0_1, [RH, Score=180, Expect=1e-47]} {RNA1509_16656} {RNA1310_1517} {RNA815_3245} |
| 2. | MligTC455_45198 | 336 | 7 | Mlig455_013580 | Neo: - Age: Down-Down-Down Region-enriched R2: 3.274/0.02984 |
TSR1 | 4.972 | 1.000 | 1.000 | - | 0.978 | 1.000 | 0.994 | Mlig455_013580 {REF} {Length: 2484} {TRANSSPLICED} {Pfam: 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal [PF04950.14, score=251.8]} {Human: ENSG00000167721, TSR1, TSR1, ribosome maturation factor, [RH, Score=220, Expect=8e-61]} {Mouse: ENSMUSG00000038335, Tsr1, TSR1 20S rRNA accumulation, [RH, Score=223, Expect=6e-62]} {Dmel: FBgn0037073, Tsr1, Tsr1 ribosome assembly factor, [RH, Score=214, Expect=8e-59]} {Celegans: WBGene00006497, tag-151, Pre-rRNA-processing protein TSR1 homolog, [RH, Score=209, Expect=1e-57]} {Smed: dd_Smed_v6_5502_0_1, dd_Smed_v6_5502_0_1, [RH, Score=180, Expect=2e-47]} {RNA1509_16656, RNA1509_6565} {RNA1310_1517, RNA1509_16656, RNA1509_6565} {RNA1509_16656, RNA1509_6565, RNA815_3245} |
| 3. | MligTC455_15629 | 415 | 8.65 | Mlig455_004619 | Neo: Neoblast, stringent Age: - Region-enriched R5: 1.273/0.00412 Regeneration-upregulated R3: 2.136 Regeneration-enriched R3: 2.136 |
MCM2 | 1.754 | 0.781 | - | - | - | 0.973 | - | Mlig455_004619 {REF} {Length: 4217} {TRANSSPLICED} {Pfam: MCM P-loop domain [PF00493.25, score=330.2]; MCM OB domain [PF17207.5, score=130.7]; MCM AAA-lid domain [PF17855.3, score=109.4]; Mini-chromosome maintenance protein 2 [PF12619.10, score=55.8]; MCM N-terminal domain [PF14551.8, score=50.1]; Magnesium chelatase, subunit ChlI [PF01078.23, score=34.7]; AAA domain (dynein-related subfamily) [PF07728.16, score=18.6]} {Human: ENSG00000073111, MCM2, minichromosome maintenance complex component 2, [RH, Score=1056, Expect=0.0]} {Mouse: ENSMUSG00000002870, Mcm2, minichromosome maintenance complex component 2, [RH, Score=1046, Expect=0.0]} {Dmel: FBgn0014861, Mcm2, Minichromosome maintenance 2, [RH, Score=991, Expect=0.0]} {Celegans: WBGene00003154, mcm-2, Yeast MCM (Licensing factor) related, [RH, Score=895, Expect=0.0]} {Smed: dd_Smed_v6_7682_0_1, dd_Smed_v6_7682_0_1, [RH, Score=915, Expect=0.0]} {RNA1509_3101} {RNA1310_746.2} {RNA815_2497} |
| 4. | MligTC455_26277 | 335 | 6.98 | Mlig455_023707 | Neo: Int S/G2/M Age: - Region-enriched R5: 3.179/0.00000 |
PRR9 | 1.695 | 0.737 | - | - | - | 0.958 | - | Mlig455_023707 {REF} {Length: 1064} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=45.8, Expect=3e-06]} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=47.0, Expect=4e-06]} {Celegans: WBGene00018026, F35A5.4, [Score=50.8, Expect=1e-07]} {RNA1509_49456} {RNA1310_51944, RNA1509_49456} {RNA1509_49456, RNA815_31620} |
| 5. | MligTC455_03281 | 557 | 11.61 | Mlig455_031117 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 2.391/0.00055 |
NAF1 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_031117 {REF} {Length: 1997} {TRANSSPLICED} {Pfam: Gar1/Naf1 RNA binding region [PF04410.16, score=58.4]} {Human: ENSG00000145414, NAF1, nuclear assembly factor 1 ribonucleoprotein, [RH, Score=114, Expect=2e-26]} {Mouse: ENSMUSG00000014907, Naf1, nuclear assembly factor 1 ribonucleoprotein, [RH, Score=117, Expect=2e-27]} {Dmel: FBgn0032701, CG10341, [RH, Score=80.9, Expect=9e-16]} {RNA1509_15924} {RNA1310_15351} {RNA815_24898} |
| 6. | MligTC455_10437 | 37 | 0.77 | Mlig455_010807 | Neo: - Age: - |
PDP1 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_010807 {REF} {Length: 2313} {Pfam: Protein phosphatase 2C [PF00481.23, score=37.4]} {Human: ENSG00000164951, PDP1, pyruvate dehyrogenase phosphatase catalytic subunit 1, [Score=75.5, Expect=6e-14]} {Mouse: ENSMUSG00000049225, Pdp1, pyruvate dehyrogenase phosphatase catalytic subunit 1, [Score=74.7, Expect=7e-14]} {Celegans: WBGene00022832, pdp-1, Pyruvate Dehydrogenase Phosphatase homolog, [Score=80.1, Expect=5e-16]} {Smed: dd_Smed_v6_4201_0_1, dd_Smed_v6_4201_0_1, [Score=81.3, Expect=4e-17]} {RNA1310_30862} {RNA815_43106} |
| 7. | MligTC455_17090 | 276 | 5.75 | Mlig455_029893 | Neo: Irradiation Age: - |
TRMT10A | 0.959 | - | - | - | - | - | 0.959 | Mlig455_029893 {REF} {Length: 2407} {TRANSSPLICED} {Pfam: tRNA (Guanine-1)-methyltransferase [PF01746.23, score=90.1]; Omp85 superfamily domain [PF01103.25, score=42.6]} {Human: ENSG00000145331, TRMT10A, tRNA methyltransferase 10A, [RH, Score=160, Expect=2e-43]} {Mouse: ENSMUSG00000004127, Trmt10a, tRNA methyltransferase 10A, [RH, Score=165, Expect=3e-45]} {Dmel: FBgn0031189, CG14618, [RH, Score=134, Expect=2e-34]} {Celegans: WBGene00009131, F25H8.1, [RH, Score=170, Expect=7e-48]} {Smed: dd_Smed_v6_9031_0_1, dd_Smed_v6_9031_0_1, [RH, Score=200, Expect=3e-59]} {RNA1509_54497} {RNA1310_25443} {RNA815_16471.1} |
| 8. | MligTC455_38824 | 2057 | 42.86 | Mlig455_023690 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.387 Region-specific R5: 2.276 Region-enriched R5: 2.187/0.00000 |
MEX3C | 0.958 | - | - | - | - | 0.958 | - | Mlig455_023690 {REF} {Length: 3342} {TRANSSPLICED} {Pfam: KH domain [PF00013.31, score=73.3]; KH domain [PF07650.19, score=24.6]; KH domain [PF13083.8, score=22.6]; NusA-like KH domain [PF13184.8, score=21.4]} {Human: ENSG00000176624, MEX3C, mex-3 RNA binding family member C, [RH, Score=108, Expect=3e-24]; ENSG00000254726, MEX3A, mex-3 RNA binding family member A, [RH, Score=106, Expect=9e-24]} {Mouse: ENSMUSG00000037253, Mex3c, mex3 RNA binding family member C, [RH, Score=108, Expect=2e-24]; ENSMUSG00000074480, Mex3a, mex3 RNA binding family member A, [RH, Score=107, Expect=3e-24]} {Dmel: FBgn0039920, CG11360, [Score=101, Expect=4e-22]} {Celegans: WBGene00003229, mex-3, Muscle EXcess, [Score=104, Expect=7e-24]} {Smed: dd_Smed_v6_1999_0_1, dd_Smed_v6_1999_0_1, [Score=61.6, Expect=7e-10]} {RNA1509_13100} {RNA1310_2527.1} {RNA815_700.1} |
| 9. | MligTC455_16103 | 1934 | 40.3 | Mlig455_042092, Mlig455_065826 | Neo: - Age: - |
HACL1 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_042092 {REF} {Length: 2027} {TRANSSPLICED} {Pfam: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain [PF02776.20, score=157.4]; Thiamine pyrophosphate enzyme, central domain [PF00205.24, score=112.3]; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain [PF02775.23, score=60.4]} {Human: ENSG00000131373, HACL1, 2-hydroxyacyl-CoA lyase 1, [RH, Score=574, Expect=0.0]} {Mouse: ENSMUSG00000021884, Hacl1, 2-hydroxyacyl-CoA lyase 1, [RH, Score=578, Expect=0.0]} {Dmel: FBgn0034488, CG11208, [RH, Score=563, Expect=0.0]} {Celegans: WBGene00007143, B0334.3, [RH, Score=545, Expect=0.0]} {Smed: dd_Smed_v6_1784_0_1, dd_Smed_v6_1784_0_1, [Score=143, Expect=2e-36]} {RNA1509_23809} {RNA1310_13350.1} {RNA815_9631} Mlig455_065826 {REF} {Length: 2026} {TRANSSPLICED} {Pfam: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain [PF02776.20, score=159.5]; Thiamine pyrophosphate enzyme, central domain [PF00205.24, score=116.2]} {Human: ENSG00000131373, HACL1, 2-hydroxyacyl-CoA lyase 1, [Score=410, Expect=1e-139]} {Mouse: ENSMUSG00000021884, Hacl1, 2-hydroxyacyl-CoA lyase 1, [Score=403, Expect=7e-137]} {Dmel: FBgn0034488, CG11208, [Score=397, Expect=6e-135]} {Celegans: WBGene00007143, B0334.3, [Score=355, Expect=9e-119]} {Smed: dd_Smed_v6_1784_0_1, dd_Smed_v6_1784_0_1, [Score=114, Expect=2e-27]} {RNA1509_15276, RNA1509_23809} {RNA1310_13350.1, RNA1509_15276, RNA1509_23809} {RNA1509_15276, RNA1509_23809, RNA815_9631} |
| 10. | MligTC455_14807 | 138 | 2.87 | Mlig455_003714 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.810/0.00011 |
0.953 | - | - | - | - | 0.953 | - | Mlig455_003714 {REF} {Length: 2409} {TRANSSPLICED} {RNA1509_16227} {RNA1310_7722, RNA1509_16227} {RNA1509_16227, RNA815_3265} | |
| 11. | MligTC455_46359 | 1639 | 34.15 | Mlig455_002958 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.308 Region-enriched R5: 1.054/0.00491 |
RAE1 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_002958 {REF} {Length: 1300} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=43.4]} {Human: ENSG00000101146, RAE1, ribonucleic acid export 1, [RH, Score=397, Expect=2e-137]} {Mouse: ENSMUSG00000027509, Rae1, ribonucleic acid export 1, [RH, Score=392, Expect=9e-136]} {Dmel: FBgn0034646, Rae1, [RH, Score=405, Expect=1e-141]} {Celegans: WBGene00003803, rae-1, mRNA export factor rae-1, [RH, Score=353, Expect=7e-121]} {Smed: dd_Smed_v6_3456_0_1, dd_Smed_v6_3456_0_1, [RH, Score=389, Expect=4e-135]} {RNA1509_12434, RNA1509_33157, RNA1509_55930} {RNA1310_24271, RNA1509_12434, RNA1509_33157, RNA1509_55930} {RNA1509_12434, RNA1509_33157, RNA1509_55930, RNA815_11521} |
| 12. | MligTC455_48886 | 198 | 4.13 | Mlig455_015357 | Neo: - Age: - Region-enriched R5: 1.919/0.03368 |
0.95 | - | - | - | - | 0.950 | - | Mlig455_015357 {REF} {Length: 2156} {TRANSSPLICED} {Pfam: Oxidoreductase family, NAD-binding Rossmann fold [PF01408.24, score=51.3]; Oxidoreductase family, C-terminal alpha/beta domain [PF02894.19, score=29.7]} {RNA1509_15686} {RNA1310_3343.1, RNA1509_15686} {RNA1509_15686, RNA815_561.1} |
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