TomoSeq data search

Data search

Results for MligTC455_45226

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_45226	3521	73.36	Mlig455_017338, Mlig455_043534	Neo: - Age: -	USF1	Mlig455_017338 {REF} {Length: 2590} {TRANSSPLICED} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=42.9]} {Human: ENSG00000158773, USF1, upstream transcription factor 1, [RH, Score=65.1, Expect=2e-11]} {Mouse: ENSMUSG00000026641, Usf1, upstream transcription factor 1, [RH, Score=64.3, Expect=2e-11]} {Dmel: FBgn0029711, Usf, [RH, Score=58.9, Expect=2e-09]} {Smed: dd_Smed_v6_4871_0_1, dd_Smed_v6_4871_0_1, [Score=48.1, Expect=4e-06]} {RNA1509_33124, RNA1509_43039, RNA1509_48114, RNA1509_6850} {RNA1310_23053, RNA1509_33124, RNA1509_43039, RNA1509_48114, RNA1509_6850} {RNA1509_33124, RNA1509_43039, RNA1509_48114, RNA1509_6850, RNA815_10486} Mlig455_043534 {REF} {Length: 2561} {TRANSSPLICED} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=42.9]} {Human: ENSG00000158773, USF1, upstream transcription factor 1, [RH, Score=65.5, Expect=2e-11]} {Mouse: ENSMUSG00000026641, Usf1, upstream transcription factor 1, [RH, Score=64.7, Expect=2e-11]} {Dmel: FBgn0029711, Usf, [RH, Score=58.5, Expect=2e-09]} {Smed: dd_Smed_v6_4871_0_1, dd_Smed_v6_4871_0_1, [Score=48.1, Expect=4e-06]} {RNA1509_13044, RNA1509_58603} {RNA1310_23754, RNA1509_13044, RNA1509_58603} {RNA1509_13044, RNA1509_58603, RNA815_10486}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_45226

3521

73.36

Mlig455_017338, Mlig455_043534

Neo: -

Age: -

USF1

Mlig455_017338 {REF} {Length: 2590} {TRANSSPLICED} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=42.9]} {Human: ENSG00000158773, USF1, upstream transcription factor 1, [RH, Score=65.1, Expect=2e-11]} {Mouse: ENSMUSG00000026641, Usf1, upstream transcription factor 1, [RH, Score=64.3, Expect=2e-11]} {Dmel: FBgn0029711, Usf, [RH, Score=58.9, Expect=2e-09]} {Smed: dd_Smed_v6_4871_0_1, dd_Smed_v6_4871_0_1, [Score=48.1, Expect=4e-06]} {RNA1509_33124, RNA1509_43039, RNA1509_48114, RNA1509_6850} {RNA1310_23053, RNA1509_33124, RNA1509_43039, RNA1509_48114, RNA1509_6850} {RNA1509_33124, RNA1509_43039, RNA1509_48114, RNA1509_6850, RNA815_10486}

Mlig455_043534 {REF} {Length: 2561} {TRANSSPLICED} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=42.9]} {Human: ENSG00000158773, USF1, upstream transcription factor 1, [RH, Score=65.5, Expect=2e-11]} {Mouse: ENSMUSG00000026641, Usf1, upstream transcription factor 1, [RH, Score=64.7, Expect=2e-11]} {Dmel: FBgn0029711, Usf, [RH, Score=58.5, Expect=2e-09]} {Smed: dd_Smed_v6_4871_0_1, dd_Smed_v6_4871_0_1, [Score=48.1, Expect=4e-06]} {RNA1509_13044, RNA1509_58603} {RNA1310_23754, RNA1509_13044, RNA1509_58603} {RNA1509_13044, RNA1509_58603, RNA815_10486}

Cumulative graph for MligTC455_45226

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.361	6.353	0.01526	0.34775
RegionR2	0.183	6.353	0.52695	0.89917
RegionR3	0.34	6.353	0.15291	0.66159
RegionR4	-0.362	6.353	0.19176	0.46767
RegionR5	0.413	6.353	0.06306	0.22090
RegionR6	0.02	6.353	0.93551	1.00000
RegionR7	0.294	6.353	0.26776	0.89832
RegionR8	0.475	6.353	0.11818	0.63342

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.244	6.353	0.76028	1.00000
RegenerationR2	-0.2	6.353	0.47317	0.85902
RegenerationR3	0.054	6.353	0.85301	0.99915
RegenerationR4	0.161	6.353	0.59145	0.90971
RegenerationR5	-0.15	6.353	0.59190	0.90654
RegenerationR6	-0.02	6.353	0.94617	1.00000
RegenerationBL	-0.889	6.353	0.00440	0.06045
RegenerationTP	-0.334	6.353	0.28852	0.73411

Genes with expression patterns similar to MligTC455_45226

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_45226	3521	73.36	Mlig455_017338, Mlig455_043534	Neo: - Age: -	USF1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_017338 {REF} {Length: 2590} {TRANSSPLICED} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=42.9]} {Human: ENSG00000158773, USF1, upstream transcription factor 1, [RH, Score=65.1, Expect=2e-11]} {Mouse: ENSMUSG00000026641, Usf1, upstream transcription factor 1, [RH, Score=64.3, Expect=2e-11]} {Dmel: FBgn0029711, Usf, [RH, Score=58.9, Expect=2e-09]} {Smed: dd_Smed_v6_4871_0_1, dd_Smed_v6_4871_0_1, [Score=48.1, Expect=4e-06]} {RNA1509_33124, RNA1509_43039, RNA1509_48114, RNA1509_6850} {RNA1310_23053, RNA1509_33124, RNA1509_43039, RNA1509_48114, RNA1509_6850} {RNA1509_33124, RNA1509_43039, RNA1509_48114, RNA1509_6850, RNA815_10486} Mlig455_043534 {REF} {Length: 2561} {TRANSSPLICED} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=42.9]} {Human: ENSG00000158773, USF1, upstream transcription factor 1, [RH, Score=65.5, Expect=2e-11]} {Mouse: ENSMUSG00000026641, Usf1, upstream transcription factor 1, [RH, Score=64.7, Expect=2e-11]} {Dmel: FBgn0029711, Usf, [RH, Score=58.5, Expect=2e-09]} {Smed: dd_Smed_v6_4871_0_1, dd_Smed_v6_4871_0_1, [Score=48.1, Expect=4e-06]} {RNA1509_13044, RNA1509_58603} {RNA1310_23754, RNA1509_13044, RNA1509_58603} {RNA1509_13044, RNA1509_58603, RNA815_10486}
2.	MligTC455_08201	1353	28.2	Mlig455_025321	Neo: - Age: -		1.684	-	-	-	0.730	-	0.954	Mlig455_025321 {REF} {Length: 5147} {TRANSSPLICED} {tRNA: Tyr(GTA), score=73.9} {RNA1509_19353, RNA1509_8053} {RNA1310_5924, RNA1509_19353, RNA1509_8053} {RNA1509_19353, RNA1509_8053, RNA815_2357}
3.	MligTC455_32531	1669	34.77	Mlig455_004484, Mlig455_023700, Mlig455_024891, Mlig455_032869, Mlig455_043031, Mlig455_063565	Neo: - Age: logFC(26M/2M)=-0.796 Region-enriched R4: 2.226/0.00000		0.96	-	-	-	0.960	-	-	Mlig455_004484 {REF} {Length: 1544} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_46555} {RNA1310_8675} {RNA815_3094.1} Mlig455_023700 {REF} {Length: 806} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_46555} {RNA1310_8675} {RNA815_3094.1} Mlig455_024891 {REF} {Length: 1727} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23515} {RNA1310_8675} {RNA815_3094.1} Mlig455_032869 {REF} {Length: 1545} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_46555} {RNA1310_8675} {RNA815_3094.1} Mlig455_043031 {REF} {Length: 3381} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23515, RNA1509_2753, RNA1509_46555} {RNA1310_8675, RNA1509_23515, RNA1509_2753, RNA1509_46555} {RNA1509_23515, RNA1509_2753, RNA1509_46555, RNA815_3094.1} Mlig455_063565 {REF} {Length: 1740} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23515} {RNA1310_8675} {RNA815_3094.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts