TomoSeq data search

Data search

Results for MligTC455_45277

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_45277	2706	56.38	Mlig455_031385	Neo: - Age: logFC(26M/2M)=-0.201	CHMP4B	Mlig455_031385 {REF} {Length: 1767} {Pfam: Snf7 [PF03357.23, score=170.5]; Citrate synthase, C-terminal domain [PF00285.23, score=19.2]} {Human: ENSG00000101421, CHMP4B, charged multivesicular body protein 4B, [RH, Score=233, Expect=2e-77]} {Mouse: ENSMUSG00000038467, Chmp4b, charged multivesicular body protein 4B, [RH, Score=234, Expect=6e-78]} {Dmel: FBgn0086656, shrb, shrub, [RH, Score=217, Expect=2e-71]} {Celegans: WBGene00016961, vps-32.1, Related to yeast Vacuolar Protein Sorting factor, [Score=215, Expect=1e-70]} {Smed: dd_Smed_v6_654_0_1, dd_Smed_v6_654_0_1, [RH, Score=286, Expect=9e-99]} {RNA1509_1712, RNA1509_7854} {RNA1310_16741, RNA1509_1712, RNA1509_7854} {RNA1509_1712, RNA1509_7854, RNA815_12664}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_45277

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	1.04	5.926	0.02674	0.42818
RegionR2	-0.092	5.926	0.73824	1.00000
RegionR3	-0.497	5.926	0.04013	0.34890
RegionR4	0.642	5.926	0.01726	0.09175
RegionR5	-0.062	5.926	0.78148	1.00000
RegionR6	-0.158	5.926	0.50583	1.00000
RegionR7	-0.044	5.926	0.86962	1.00000
RegionR8	-0.829	5.926	0.01489	0.23781

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-2.956	5.926	0.00087	0.16348
RegenerationR2	-0.214	5.926	0.43088	0.83445
RegenerationR3	0.051	5.926	0.86363	1.00000
RegenerationR4	-0.738	5.926	0.01302	0.17647
RegenerationR5	-0.381	5.926	0.17554	0.60455
RegenerationR6	-0.456	5.926	0.13100	0.44455
RegenerationBL	-0.555	5.926	0.10025	0.37228
RegenerationTP	0.005	5.926	0.98823	1.00000

Genes with expression patterns similar to MligTC455_45277

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_45277	2706	56.38	Mlig455_031385	Neo: - Age: logFC(26M/2M)=-0.201	CHMP4B	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_031385 {REF} {Length: 1767} {Pfam: Snf7 [PF03357.23, score=170.5]; Citrate synthase, C-terminal domain [PF00285.23, score=19.2]} {Human: ENSG00000101421, CHMP4B, charged multivesicular body protein 4B, [RH, Score=233, Expect=2e-77]} {Mouse: ENSMUSG00000038467, Chmp4b, charged multivesicular body protein 4B, [RH, Score=234, Expect=6e-78]} {Dmel: FBgn0086656, shrb, shrub, [RH, Score=217, Expect=2e-71]} {Celegans: WBGene00016961, vps-32.1, Related to yeast Vacuolar Protein Sorting factor, [Score=215, Expect=1e-70]} {Smed: dd_Smed_v6_654_0_1, dd_Smed_v6_654_0_1, [RH, Score=286, Expect=9e-99]} {RNA1509_1712, RNA1509_7854} {RNA1310_16741, RNA1509_1712, RNA1509_7854} {RNA1509_1712, RNA1509_7854, RNA815_12664}
2.	MligTC455_29936	241	5.01	Mlig455_027834, Mlig455_032110, Mlig455_042040, Mlig455_053160, Mlig455_060013, Mlig455_068652	Neo: - Age: - Region-enriched R4: 2.807/0.01859		0.953	-	-	-	-	-	0.953	Mlig455_027834 {REF} {Length: 1462} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1} Mlig455_032110 {REF} {Length: 440} {RNA1509_22369} {RNA1310_28603.1} {RNA815_3258.1} Mlig455_042040 {REF} {Length: 1211} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1} Mlig455_053160 {REF} {Length: 1298} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1} Mlig455_060013 {REF} {Length: 1463} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1} Mlig455_068652 {REF} {Length: 1496} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1}
3.	MligTC455_38187	373	7.76	Mlig455_014893, Mlig455_014894, Mlig455_015018, Mlig455_038636	Neo: - Age: -	KCNQ4, KCNQ5	0.95	-	-	-	-	-	0.950	Mlig455_014893 {REF} {Length: 2201} {RNA1509_14697} {RNA1310_35101} {RNA815_16213} Mlig455_014894 {REF} {Length: 2033} {Pfam: Ion transport protein [PF00520.33, score=97.0]; Ion channel [PF07885.18, score=51.5]} {Human: ENSG00000185760, KCNQ5, potassium voltage-gated channel subfamily Q member 5, [Score=360, Expect=7e-112]} {Mouse: ENSMUSG00000028033, Kcnq5, potassium voltage-gated channel, subfamily Q, member 5, [Score=359, Expect=1e-111]} {Dmel: FBgn0033494, KCNQ, KCNQ potassium channel, [Score=419, Expect=1e-137]} {Celegans: WBGene00002233, kqt-1, KQT-1 potassium channel; Potassium channel, KvQLT family, [Score=408, Expect=3e-133]} {Smed: dd_Smed_v6_12681_0_1, dd_Smed_v6_12681_0_1, [Score=494, Expect=3e-165]} {RNA1509_14697} {RNA1310_2072.1} {RNA815_522} Mlig455_015018 {REF} {Length: 3026} {Pfam: Ion transport protein [PF00520.33, score=102.9]; KCNQ voltage-gated potassium channel [PF03520.16, score=97.5]; Ion channel [PF07885.18, score=50.7]} {Human: ENSG00000117013, KCNQ4, potassium voltage-gated channel subfamily Q member 4, [RH, Score=438, Expect=6e-140]} {Mouse: ENSMUSG00000028631, Kcnq4, potassium voltage-gated channel, subfamily Q, member 4, [RH, Score=431, Expect=1e-137]} {Dmel: FBgn0033494, KCNQ, KCNQ potassium channel, [RH, Score=452, Expect=5e-142]} {Celegans: WBGene00002233, kqt-1, KQT-1 potassium channel; Potassium channel, KvQLT family, [Score=439, Expect=1e-140]} {Smed: dd_Smed_v6_12681_0_1, dd_Smed_v6_12681_0_1, [RH, Score=529, Expect=7e-174]} {RNA1509_53461} {RNA1310_5448} {RNA815_4132} Mlig455_038636 {REF} {Length: 5388} {TRANSSPLICED} {Pfam: KCNQ voltage-gated potassium channel [PF03520.16, score=122.0]; Ion transport protein [PF00520.33, score=102.5]; Ion channel [PF07885.18, score=50.3]} {Human: ENSG00000117013, KCNQ4, potassium voltage-gated channel subfamily Q member 4, [RH, Score=456, Expect=9e-145]} {Mouse: ENSMUSG00000028631, Kcnq4, potassium voltage-gated channel, subfamily Q, member 4, [RH, Score=449, Expect=4e-142]} {Dmel: FBgn0033494, KCNQ, KCNQ potassium channel, [RH, Score=462, Expect=1e-143]} {Celegans: WBGene00002233, kqt-1, KQT-1 potassium channel; Potassium channel, KvQLT family, [Score=442, Expect=5e-140]} {Smed: dd_Smed_v6_12681_0_1, dd_Smed_v6_12681_0_1, [Score=537, Expect=2e-174]} {RNA1509_53461} {RNA1310_2072.1} {RNA815_4132}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_45277

2706

56.38

Mlig455_031385

Neo: -

Age: logFC(26M/2M)=-0.201

CHMP4B

1.000

MligTC455_29936

241

5.01

Mlig455_027834, Mlig455_032110, Mlig455_042040, Mlig455_053160, Mlig455_060013, Mlig455_068652

Neo: -

Age: -

Region-enriched R4: 2.807/0.01859

0.953

Mlig455_027834 {REF} {Length: 1462} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1}

Mlig455_032110 {REF} {Length: 440} {RNA1509_22369} {RNA1310_28603.1} {RNA815_3258.1}

Mlig455_042040 {REF} {Length: 1211} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1}

Mlig455_053160 {REF} {Length: 1298} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1}

Mlig455_060013 {REF} {Length: 1463} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1}

Mlig455_068652 {REF} {Length: 1496} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1}

MligTC455_38187

373

7.76

Mlig455_014893, Mlig455_014894, Mlig455_015018, Mlig455_038636

Neo: -

Age: -

KCNQ4, KCNQ5

0.95

0.950

Mlig455_014893 {REF} {Length: 2201} {RNA1509_14697} {RNA1310_35101} {RNA815_16213}

Mlig455_014894 {REF} {Length: 2033} {Pfam: Ion transport protein [PF00520.33, score=97.0]; Ion channel [PF07885.18, score=51.5]} {Human: ENSG00000185760, KCNQ5, potassium voltage-gated channel subfamily Q member 5, [Score=360, Expect=7e-112]} {Mouse: ENSMUSG00000028033, Kcnq5, potassium voltage-gated channel, subfamily Q, member 5, [Score=359, Expect=1e-111]} {Dmel: FBgn0033494, KCNQ, KCNQ potassium channel, [Score=419, Expect=1e-137]} {Celegans: WBGene00002233, kqt-1, KQT-1 potassium channel; Potassium channel, KvQLT family, [Score=408, Expect=3e-133]} {Smed: dd_Smed_v6_12681_0_1, dd_Smed_v6_12681_0_1, [Score=494, Expect=3e-165]} {RNA1509_14697} {RNA1310_2072.1} {RNA815_522}

Mlig455_015018 {REF} {Length: 3026} {Pfam: Ion transport protein [PF00520.33, score=102.9]; KCNQ voltage-gated potassium channel [PF03520.16, score=97.5]; Ion channel [PF07885.18, score=50.7]} {Human: ENSG00000117013, KCNQ4, potassium voltage-gated channel subfamily Q member 4, [RH, Score=438, Expect=6e-140]} {Mouse: ENSMUSG00000028631, Kcnq4, potassium voltage-gated channel, subfamily Q, member 4, [RH, Score=431, Expect=1e-137]} {Dmel: FBgn0033494, KCNQ, KCNQ potassium channel, [RH, Score=452, Expect=5e-142]} {Celegans: WBGene00002233, kqt-1, KQT-1 potassium channel; Potassium channel, KvQLT family, [Score=439, Expect=1e-140]} {Smed: dd_Smed_v6_12681_0_1, dd_Smed_v6_12681_0_1, [RH, Score=529, Expect=7e-174]} {RNA1509_53461} {RNA1310_5448} {RNA815_4132}

Mlig455_038636 {REF} {Length: 5388} {TRANSSPLICED} {Pfam: KCNQ voltage-gated potassium channel [PF03520.16, score=122.0]; Ion transport protein [PF00520.33, score=102.5]; Ion channel [PF07885.18, score=50.3]} {Human: ENSG00000117013, KCNQ4, potassium voltage-gated channel subfamily Q member 4, [RH, Score=456, Expect=9e-145]} {Mouse: ENSMUSG00000028631, Kcnq4, potassium voltage-gated channel, subfamily Q, member 4, [RH, Score=449, Expect=4e-142]} {Dmel: FBgn0033494, KCNQ, KCNQ potassium channel, [RH, Score=462, Expect=1e-143]} {Celegans: WBGene00002233, kqt-1, KQT-1 potassium channel; Potassium channel, KvQLT family, [Score=442, Expect=5e-140]} {Smed: dd_Smed_v6_12681_0_1, dd_Smed_v6_12681_0_1, [Score=537, Expect=2e-174]} {RNA1509_53461} {RNA1310_2072.1} {RNA815_4132}