Data search
Results for MligTC455_45302
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_45302 | 1200 | 25.00 | Mlig455_065004 | Neo: - Age: - |
SENP1 | Mlig455_065004 {REF} {Length: 1934} {Pfam: Ulp1 protease family, C-terminal catalytic domain [PF02902.21, score=152.4]} {Human: ENSG00000079387, SENP1, SUMO specific peptidase 1, [RH, Score=237, Expect=2e-69]} {Mouse: ENSMUSG00000033075, Senp1, SUMO1/sentrin specific peptidase 1, [RH, Score=238, Expect=6e-70]} {Dmel: FBgn0027603, Ulp1, [RH, Score=171, Expect=6e-45]} {Celegans: WBGene00006736, ulp-1, Sentrin-specific protease, [RH, Score=223, Expect=2e-64]} {Smed: dd_Smed_v6_11073_0_1, dd_Smed_v6_11073_0_1, [RH, Score=163, Expect=2e-44]} {RNA1509_12316} {RNA1310_10001} {RNA815_3430} |
Cumulative graph for MligTC455_45302
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.891 | 4.913 | 0.33989 | 0.98504 | |
| RegionR2 | 0.351 | 4.913 | 0.41733 | 0.80948 | |
| RegionR3 | -0.241 | 4.913 | 0.50837 | 0.99770 | |
| RegionR4 | 0.139 | 4.913 | 0.71623 | 1.00000 | |
| RegionR5 | 0.821 | 4.913 | 0.00767 | 0.04766 | |
| RegionR6 | 0.049 | 4.913 | 0.89298 | 1.00000 | |
| RegionR7 | -0.456 | 4.913 | 0.34766 | 0.98507 | |
| RegionR8 | 0.228 | 4.913 | 0.67879 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.454 | 4.913 | 0.05436 | 0.71001 | |
| RegenerationR2 | 0.021 | 4.913 | 0.95518 | 1.00000 | |
| RegenerationR3 | 0.57 | 4.913 | 0.16890 | 0.60300 | |
| RegenerationR4 | 0.341 | 4.913 | 0.40150 | 0.81437 | |
| RegenerationR5 | 0.004 | 4.913 | 0.99281 | 1.00000 | |
| RegenerationR6 | 0.603 | 4.913 | 0.13405 | 0.44943 | |
| RegenerationBL | 0.618 | 4.913 | 0.15942 | 0.47829 | |
| RegenerationTP | 0.815 | 4.913 | 0.08767 | 0.46690 |
Genes with expression patterns similar to MligTC455_45302
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_45302 | 1200 | 25 | Mlig455_065004 | Neo: - Age: - |
SENP1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_065004 {REF} {Length: 1934} {Pfam: Ulp1 protease family, C-terminal catalytic domain [PF02902.21, score=152.4]} {Human: ENSG00000079387, SENP1, SUMO specific peptidase 1, [RH, Score=237, Expect=2e-69]} {Mouse: ENSMUSG00000033075, Senp1, SUMO1/sentrin specific peptidase 1, [RH, Score=238, Expect=6e-70]} {Dmel: FBgn0027603, Ulp1, [RH, Score=171, Expect=6e-45]} {Celegans: WBGene00006736, ulp-1, Sentrin-specific protease, [RH, Score=223, Expect=2e-64]} {Smed: dd_Smed_v6_11073_0_1, dd_Smed_v6_11073_0_1, [RH, Score=163, Expect=2e-44]} {RNA1509_12316} {RNA1310_10001} {RNA815_3430} |
| 2. | MligTC455_46852 | 669 | 13.95 | Mlig455_000973 | Neo: - Age: logFC(26M/2M)=0.296 Region-enriched R5: 1.717/0.00000 |
2.464 | - | 0.966 | 0.711 | - | 0.787 | - | Mlig455_000973 {REF} {Length: 2358} {TRANSSPLICED} {Pfam: ATP synthase E chain [PF05680.14, score=51.6]} {Smed: dd_Smed_v6_943_0_1, dd_Smed_v6_943_0_1, [RH, Score=61.2, Expect=6e-12]} {RNA1509_48439} {RNA1310_23642, RNA1509_48439} {RNA1509_48439, RNA815_5620.1} | |
| 3. | MligTC455_47120 | 1466 | 30.53 | Mlig455_023466, Mlig455_068137 | Neo: - Age: Down-Up-Up Region-enriched R5: 1.098/0.00077 |
MED4 | 1.764 | - | 0.962 | - | - | 0.802 | - | Mlig455_023466 {REF} {Length: 1078} {TRANSSPLICED} {Pfam: Vitamin-D-receptor interacting Mediator subunit 4 [PF10018.11, score=64.5]; Anti-sigma-K factor rskA [PF10099.11, score=20.7]} {Human: ENSG00000136146, MED4, mediator complex subunit 4, [RH, Score=118, Expect=3e-31]} {Mouse: ENSMUSG00000022109, Med4, mediator complex subunit 4, [RH, Score=119, Expect=7e-32]} {Dmel: FBgn0035754, MED4, Mediator complex subunit 4, [RH, Score=113, Expect=1e-29]} {Celegans: WBGene00007012, mdt-4, Mediator of RNA polymerase II transcription subunit 4, [RH, Score=77.4, Expect=3e-16]} {RNA1509_21858, RNA1509_54060} {RNA1310_36804, RNA1509_54060} {RNA1509_54060, RNA815_15027} Mlig455_068137 {REF} {Length: 1104} {TRANSSPLICED} {Pfam: Vitamin-D-receptor interacting Mediator subunit 4 [PF10018.11, score=64.5]; Anti-sigma-K factor rskA [PF10099.11, score=20.7]} {Human: ENSG00000136146, MED4, mediator complex subunit 4, [RH, Score=118, Expect=3e-31]} {Mouse: ENSMUSG00000022109, Med4, mediator complex subunit 4, [RH, Score=119, Expect=7e-32]} {Dmel: FBgn0035754, MED4, Mediator complex subunit 4, [RH, Score=113, Expect=1e-29]} {Celegans: WBGene00007012, mdt-4, Mediator of RNA polymerase II transcription subunit 4, [RH, Score=77.4, Expect=3e-16]} {RNA1509_21858} {RNA1310_36804, RNA1509_21858} {RNA1509_21858, RNA815_15027} |
| 4. | MligTC455_43463 | 1607 | 33.48 | Mlig455_032235 | Neo: Germline Age: logFC(26M/2M)=0.212 |
STARD10 | 1.756 | - | - | - | - | 0.955 | 0.801 | Mlig455_032235 {REF} {Length: 3055} {TRANSSPLICED} {Pfam: START domain [PF01852.21, score=108.0]} {Human: ENSG00000214530, STARD10, StAR related lipid transfer domain containing 10, [RH, Score=227, Expect=3e-73]} {Mouse: ENSMUSG00000030688, Stard10, START domain containing 10, [RH, Score=224, Expect=6e-72]} {Celegans: WBGene00012127, T28D6.7, [RH, Score=227, Expect=5e-73]} {Smed: dd_Smed_v6_498_0_1, dd_Smed_v6_498_0_1, [RH, Score=309, Expect=7e-106]} {RNA1509_34021, RNA1509_41026, RNA1509_42388, RNA1509_7761, RNA1509_8338} {RNA1310_15546.1, RNA1509_34021, RNA1509_41026, RNA1509_42388, RNA1509_7761, RNA1509_8338} {RNA1509_34021, RNA1509_41026, RNA1509_42388, RNA1509_7761, RNA1509_8338, RNA815_8120} |
| 5. | MligTC455_33762 | 409 | 8.51 | Mlig455_016902 | Neo: Int S/G2/M Age: - |
ZNF383 | 1.662 | - | 0.708 | - | 0.954 | - | - | Mlig455_016902 {REF} {Length: 1565} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=240.8]; Zinc finger, C2H2 type [PF00096.28, score=148.8]; C2H2-type zinc finger [PF13894.8, score=116.0]; C2H2-type zinc finger [PF13912.8, score=77.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=62.4]; Zinc-finger of C2H2 type [PF12874.9, score=60.3]; AN1-like Zinc finger [PF01428.18, score=31.1]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=30.2]; KIAA1045 RING finger [PF16744.7, score=30.0]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=28.6]; C2H2-type zinc ribbon [PF15909.7, score=28.3]; Family of unknown function (DUF5810) [PF19126.2, score=25.6]; Sec23/Sec24 zinc finger [PF04810.17, score=23.7]; Zinc ribbon domain [PF09723.12, score=23.7]; BED zinc finger [PF02892.17, score=20.5]; PHD-finger [PF16866.7, score=20.2]; Transcription elongation factor Elf1 like [PF05129.15, score=19.7]; TFIIH C1-like domain [PF07975.14, score=19.1]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=18.9]} {Human: ENSG00000188283, ZNF383, zinc finger protein 383, [Score=308, Expect=1e-100]; ENSG00000274349, ZNF658, zinc finger protein 658, [Score=305, Expect=5e-94]; ENSG00000167384, ZNF180, zinc finger protein 180, [Score=299, Expect=6e-95]; ENSG00000197050, ZNF420, zinc finger protein 420, [Score=299, Expect=8e-95]; ENSG00000198939, ZFP2, ZFP2 zinc finger protein, [Score=299, Expect=2e-97]; ENSG00000176293, ZNF135, zinc finger protein 135, [Score=295, Expect=5e-94]; ENSG00000251247, ZNF345, zinc finger protein 345, [Score=295, Expect=2e-95]; ENSG00000159917, ZNF235, zinc finger protein 235, [Score=294, Expect=2e-92]; ENSG00000171827, ZNF570, zinc finger protein 570, [Score=293, Expect=5e-94]} {Mouse: ENSMUSG00000095648, Gm2004, predicted gene 2004, [Score=303, Expect=1e-97]; ENSMUSG00000078875, Gm14419, predicted gene 14419, [Score=303, Expect=1e-97]; ENSMUSG00000078877, Gm14295, predicted gene 14295, [Score=298, Expect=3e-93]; ENSMUSG00000078902, Gm14443, predicted gene 14443, [Score=297, Expect=5e-95]; ENSMUSG00000049321, Zfp2, zinc finger protein 2, [Score=296, Expect=2e-96]; ENSMUSG00000055305, Zfp93, zinc finger protein 93, [Score=295, Expect=1e-93]; ENSMUSG00000099689, Zfp383, zinc finger protein 383, [Score=295, Expect=8e-96]; ENSMUSG00000087598, Zfp111, zinc finger protein 111, [Score=294, Expect=5e-93]; ENSMUSG00000063281, Zfp35, zinc finger protein 35, [Score=291, Expect=5e-93]; ENSMUSG00000058402, Zfp420, zinc finger protein 420, [Score=291, Expect=5e-93]; ENSMUSG00000047603, Zfp235, zinc finger protein 235, [Score=290, Expect=1e-91]; ENSMUSG00000078868, Gm14412, predicted gene 14412, [Score=289, Expect=7e-93]; ENSMUSG00000051351, Zfp46, zinc finger protein 46, [Score=288, Expect=2e-93]; ENSMUSG00000057101, Zfp180, zinc finger protein 180, [Score=288, Expect=3e-91]} {Dmel: FBgn0032295, CG12299, [Score=213, Expect=3e-62]} {Celegans: WBGene00021931, Y55F3AM.14, [Score=166, Expect=2e-45]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [Score=161, Expect=4e-46]} {RNA1509_12248} {RNA1310_52825} {RNA815_13568} |
| 6. | MligTC455_49048 | 666 | 13.88 | Mlig455_036523, Mlig455_069129 | Neo: Irradiation Age: - Region-enriched R5: 1.982/0.00001 |
CSNK2B | 0.97 | - | 0.970 | - | - | - | - | Mlig455_036523 {REF} {Length: 2520} {TRANSSPLICED} {Pfam: Casein kinase II regulatory subunit [PF01214.20, score=252.8]} {Human: ENSG00000224398, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]; ENSG00000228875, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]; ENSG00000204435, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]; ENSG00000224774, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]; ENSG00000206406, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]; ENSG00000230700, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]; ENSG00000232960, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]} {Mouse: ENSMUSG00000024387, Csnk2b, casein kinase 2, beta polypeptide, [Score=338, Expect=9e-119]} {Dmel: FBgn0000259, CkIIbeta, Casein kinase II beta subunit, [Score=328, Expect=6e-115]} {Celegans: WBGene00002196, kin-10, Casein kinase II subunit beta, [Score=303, Expect=4e-105]} {Smed: dd_Smed_v6_1428_0_1, dd_Smed_v6_1428_0_1, [Score=318, Expect=3e-111]} {RNA1509_17076} {RNA1310_24879, RNA1509_17076} {RNA1509_17076, RNA815_16826} Mlig455_069129 {REF} {Length: 2748} {TRANSSPLICED} {Pfam: Casein kinase II regulatory subunit [PF01214.20, score=252.8]} {Human: ENSG00000224398, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]; ENSG00000228875, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]; ENSG00000204435, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]; ENSG00000224774, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]; ENSG00000206406, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]; ENSG00000230700, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]; ENSG00000232960, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]} {Mouse: ENSMUSG00000024387, Csnk2b, casein kinase 2, beta polypeptide, [Score=338, Expect=9e-119]} {Dmel: FBgn0000259, CkIIbeta, Casein kinase II beta subunit, [Score=328, Expect=6e-115]} {Celegans: WBGene00002196, kin-10, Casein kinase II subunit beta, [Score=303, Expect=4e-105]} {Smed: dd_Smed_v6_1428_0_1, dd_Smed_v6_1428_0_1, [Score=318, Expect=3e-111]} {RNA1509_17076, RNA1509_29133} {RNA1310_24879, RNA1509_29133} {RNA1509_29133, RNA815_16826} |
| 7. | MligTC455_23265 | 190 | 3.97 | Mlig455_032597 | Neo: Germline Age: - Region-enriched R5: 2.596/0.00006 |
ZFP36L1 | 0.965 | - | 0.965 | - | - | - | - | Mlig455_032597 {REF} {Length: 2986} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=39.0]; Zinc finger domain [PF18345.3, score=19.2]} {Human: ENSG00000185650, ZFP36L1, ZFP36 ring finger protein like 1, [Score=79.3, Expect=2e-15]; ENSG00000152518, ZFP36L2, ZFP36 ring finger protein like 2, [Score=76.6, Expect=4e-14]} {Mouse: ENSMUSG00000021127, Zfp36l1, zinc finger protein 36, C3H type-like 1, [Score=77.8, Expect=3e-15]; ENSMUSG00000045817, Zfp36l2, zinc finger protein 36, C3H type-like 2, [Score=76.6, Expect=2e-14]} {Dmel: FBgn0011837, Tis11, Tis11 zinc finger protein, [RH, Score=85.5, Expect=2e-17]} {Celegans: WBGene00009532, ccch-1, CCCH-type zinc finger putative transcription factor, [RH, Score=75.1, Expect=4e-14]} {Smed: dd_Smed_v6_3128_1_1, dd_Smed_v6_3128_1_1, [Score=49.7, Expect=4e-06]} {RNA1509_19725, RNA1509_2437} {RNA1310_8369, RNA1509_19725, RNA1509_2437} {RNA1509_19725, RNA1509_2437, RNA815_2500.1} |
| 8. | MligTC455_36926 | 232 | 4.83 | Mlig455_050619 | Neo: - |
0.96 | - | 0.960 | - | - | - | - | Mlig455_050619 {REF} {Length: 655} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_49677} {RNA815_29761} | |
| 9. | MligTC455_36925 | 236 | 4.92 | Mlig455_049273 | Neo: Int S/G2/M Age: Down-Up-Up |
RFX7 | 0.959 | - | 0.959 | - | - | - | - | Mlig455_049273 {REF} {Length: 3627} {TRANSSPLICED} {Pfam: RFX DNA-binding domain [PF02257.17, score=94.5]; RFX5 N-terminal domain [PF18326.3, score=27.5]; Poxvirus D5 protein-like [PF03288.18, score=19.2]} {Human: ENSG00000181827, RFX7, regulatory factor X7, [RH, Score=139, Expect=4e-34]; ENSG00000143390, RFX5, regulatory factor X5, [RH, Score=139, Expect=1e-34]} {Mouse: ENSMUSG00000037674, Rfx7, regulatory factor X, 7, [RH, Score=166, Expect=3e-43]} {Dmel: FBgn0037445, CG9727, [RH, Score=155, Expect=1e-39]} {Celegans: WBGene00000914, daf-19, RFX-like transcription factor daf-19, [Score=65.5, Expect=6e-11]} {Smed: dd_Smed_v6_15486_0_1, dd_Smed_v6_15486_0_1, [Score=142, Expect=7e-37]} {RNA1509_24096} {RNA1310_12960, RNA1509_24096} {RNA1509_24096, RNA815_14577} |
Berezikov Lab - 2020-2021 © ERIBA