Data search


search
Exact
Search

Results for MligTC455_45362

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_45362 466 9.72 Mlig455_048952

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.472

SCO1 Mlig455_048952 {REF} {Length: 1057} {TRANSSPLICED} {Pfam: SCO1/SenC [PF02630.16, score=139.5]; AhpC/TSA family [PF00578.23, score=21.8]} {Human: ENSG00000133028, SCO1, SCO1, cytochrome c oxidase assembly protein, [RH, Score=181, Expect=3e-55]} {Mouse: ENSMUSG00000069844, Sco1, SCO1 cytochrome c oxidase assembly protein, [RH, Score=189, Expect=1e-58]} {Dmel: FBgn0262467, Scox, Synthesis of cytochrome c oxidase, [RH, Score=173, Expect=5e-53]} {Celegans: WBGene00015297, sco-1, SCO (Yeast Suppressor of Cytochrome Oxidase deficiency) homolog, [RH, Score=183, Expect=4e-56]} {Smed: dd_Smed_v6_2747_0_1, dd_Smed_v6_2747_0_1, [RH, Score=202, Expect=1e-64]} {RNA1509_36634} {RNA1310_31267} {RNA815_17642}

Cumulative graph for MligTC455_45362

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.236 3.62 0.29850 0.94822
RegionR2 -0.678 3.62 0.97338 1.00000
RegionR3 -0.326 3.62 0.93647 1.00000
RegionR4 1.666 3.62 0.33296 0.65136
RegionR5 1.558 3.62 0.25901 0.57917
RegionR6 0.063 3.62 0.84776 1.00000
RegionR7 0.594 3.62 0.66054 1.00000
RegionR8 2.358 3.62 0.14310 0.69078

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 4.777 3.62 0.40946 1.00000
RegenerationR2 0.74 3.62 0.60646 0.91799
RegenerationR3 1.005 3.62 0.50349 0.85854
RegenerationR4 0.638 3.62 0.69487 0.95176
RegenerationR5 0.561 3.62 0.71528 0.95811
RegenerationR6 1.215 3.62 0.43279 0.75950
RegenerationBL 0.708 3.62 0.59055 0.94042
RegenerationTP 0.11 3.62 0.95581 1.00000


Genes with expression patterns similar to MligTC455_45362

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_45362 466 9.72 Mlig455_048952

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.472

SCO1 5 1.000 - 1.000 1.000 1.000 1.000 Mlig455_048952 {REF} {Length: 1057} {TRANSSPLICED} {Pfam: SCO1/SenC [PF02630.16, score=139.5]; AhpC/TSA family [PF00578.23, score=21.8]} {Human: ENSG00000133028, SCO1, SCO1, cytochrome c oxidase assembly protein, [RH, Score=181, Expect=3e-55]} {Mouse: ENSMUSG00000069844, Sco1, SCO1 cytochrome c oxidase assembly protein, [RH, Score=189, Expect=1e-58]} {Dmel: FBgn0262467, Scox, Synthesis of cytochrome c oxidase, [RH, Score=173, Expect=5e-53]} {Celegans: WBGene00015297, sco-1, SCO (Yeast Suppressor of Cytochrome Oxidase deficiency) homolog, [RH, Score=183, Expect=4e-56]} {Smed: dd_Smed_v6_2747_0_1, dd_Smed_v6_2747_0_1, [RH, Score=202, Expect=1e-64]} {RNA1509_36634} {RNA1310_31267} {RNA815_17642}
2. MligTC455_53254 432 8.99 Mlig455_014867

Neo: Int S/G2/M

Age: Down-Up-Up

Region-enriched R5: 2.224/0.00000

MAD2L1 0.961 - - - - 0.961 - Mlig455_014867 {REF} {Length: 1995} {Pfam: HORMA domain [PF02301.20, score=81.0]; Autophagy-related protein 13 [PF10033.11, score=19.9]} {Human: ENSG00000164109, MAD2L1, mitotic arrest deficient 2 like 1, [RH, Score=230, Expect=7e-77]} {Mouse: ENSMUSG00000029910, Mad2l1, MAD2 mitotic arrest deficient-like 1, [RH, Score=227, Expect=9e-76]} {Dmel: FBgn0035640, mad2, [RH, Score=187, Expect=4e-60]} {Celegans: WBGene00003161, mdf-2, MAD (Yeast Mitosis arrest DeFicient) related; MDF-2, [RH, Score=203, Expect=1e-66]} {RNA1509_14823} {RNA1310_12974.1} {RNA815_3365}
3. MligTC455_49837 1329 27.69 Mlig455_001986, Mlig455_002081, Mlig455_002187

Neo: -

Age: -

TTC17 0.958 - - - - - 0.958

Mlig455_001986 {REF} {Length: 3416} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=51.9]; TPR repeat [PF13414.8, score=32.8]; Tetratricopeptide repeat [PF13181.8, score=31.7]; Tetratricopeptide repeat [PF00515.30, score=31.3]; Tetratricopeptide repeat [PF13431.8, score=29.3]; Tetratricopeptide repeat [PF13428.8, score=25.5]; Tetratricopeptide repeat [PF13432.8, score=25.1]; MAS20 protein import receptor [PF02064.17, score=22.9]; Tetratricopeptide repeat [PF14559.8, score=21.9]; Protein of unknown function (DUF627) [PF04781.14, score=19.0]} {Human: ENSG00000052841, TTC17, tetratricopeptide repeat domain 17, [Score=66.2, Expect=8e-11]} {Mouse: ENSMUSG00000027194, Ttc17, tetratricopeptide repeat domain 17, [Score=66.6, Expect=4e-11]} {Celegans: WBGene00003858, ogt-1, UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase, [Score=50.4, Expect=3e-06]} {Smed: dd_Smed_v6_9818_0_1, dd_Smed_v6_9818_0_1, [RH, Score=227, Expect=7e-69]} {RNA1509_15341, RNA1509_52661} {RNA1310_12975.2, RNA1509_52661} {RNA1509_52661, RNA815_11474}

Mlig455_002081 {REF} {Length: 2492} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=51.9]; TPR repeat [PF13414.8, score=32.9]; Tetratricopeptide repeat [PF13181.8, score=31.8]; Tetratricopeptide repeat [PF00515.30, score=31.4]; Tetratricopeptide repeat [PF13431.8, score=29.3]; Tetratricopeptide repeat [PF13428.8, score=25.9]; Tetratricopeptide repeat [PF13432.8, score=25.6]; MAS20 protein import receptor [PF02064.17, score=22.9]; Tetratricopeptide repeat [PF14559.8, score=21.9]; Tetratricopeptide repeat [PF13429.8, score=20.4]; Protein of unknown function (DUF627) [PF04781.14, score=19.0]} {Human: ENSG00000052841, TTC17, tetratricopeptide repeat domain 17, [Score=66.6, Expect=7e-11]} {Mouse: ENSMUSG00000027194, Ttc17, tetratricopeptide repeat domain 17, [Score=66.6, Expect=3e-11]} {Celegans: WBGene00003858, ogt-1, UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase, [Score=50.4, Expect=3e-06]} {Smed: dd_Smed_v6_9818_0_1, dd_Smed_v6_9818_0_1, [RH, Score=228, Expect=4e-69]} {RNA1509_15341} {RNA1310_12975.2} {RNA815_11474}

Mlig455_002187 {REF} {Length: 3096} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=52.6]; TPR repeat [PF13414.8, score=34.4]; Tetratricopeptide repeat [PF00515.30, score=33.1]; Tetratricopeptide repeat [PF13181.8, score=32.5]; Tetratricopeptide repeat [PF13431.8, score=29.4]; Tetratricopeptide repeat [PF13428.8, score=25.5]; Tetratricopeptide repeat [PF13432.8, score=25.1]; MAS20 protein import receptor [PF02064.17, score=23.5]; Tetratricopeptide repeat [PF14559.8, score=21.9]; Protein of unknown function (DUF627) [PF04781.14, score=18.9]} {Human: ENSG00000052841, TTC17, tetratricopeptide repeat domain 17, [Score=66.6, Expect=6e-11]} {Mouse: ENSMUSG00000027194, Ttc17, tetratricopeptide repeat domain 17, [Score=66.6, Expect=3e-11]} {Celegans: WBGene00003858, ogt-1, UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase, [Score=50.8, Expect=2e-06]} {Smed: dd_Smed_v6_9818_0_1, dd_Smed_v6_9818_0_1, [RH, Score=228, Expect=4e-69]} {RNA1509_15341, RNA1509_19171} {RNA1310_12975.2, RNA1509_15341, RNA1509_19171} {RNA1509_15341, RNA1509_19171, RNA815_11474}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA