TomoSeq data search

Data search

Results for MligTC455_45368

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_45368	557	11.60	Mlig455_044280	Neo: - Age: -	RGP1	Mlig455_044280 {REF} {Length: 2423} {TRANSSPLICED} {Pfam: Rgp1 [PF08737.12, score=118.7]} {Human: ENSG00000107185, RGP1, RGP1 homolog, RAB6A GEF complex partner 1, [RH, Score=219, Expect=4e-67]} {Mouse: ENSMUSG00000028468, Rgp1, RAB6A GEF compex partner 1, [RH, Score=212, Expect=1e-64]} {Dmel: FBgn0037297, CG1116, [RH, Score=153, Expect=5e-42]} {Celegans: WBGene00010815, M01F1.9, [RH, Score=116, Expect=4e-29]} {RNA1509_19295} {RNA1310_16608} {RNA815_12288.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_45368

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.145	3.924	0.87338	1.00000
RegionR2	0.737	3.924	0.07645	0.33795
RegionR3	0.264	3.924	0.39511	0.92515
RegionR4	-0.419	3.924	0.27721	0.58407
RegionR5	0.01	3.924	0.97076	1.00000
RegionR6	0.246	3.924	0.44680	1.00000
RegionR7	-0.042	3.924	0.92508	1.00000
RegionR8	-0.652	3.924	0.28256	0.90914

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.398	3.924	0.13514	0.87018
RegenerationR2	-0.3	3.924	0.37398	0.79766
RegenerationR3	-0.023	3.924	0.95274	1.00000
RegenerationR4	0.343	3.924	0.37893	0.80062
RegenerationR5	0.072	3.924	0.83042	0.99781
RegenerationR6	-0.141	3.924	0.72824	0.94022
RegenerationBL	0.007	3.924	0.99111	1.00000
RegenerationTP	0.499	3.924	0.37396	0.81110

Genes with expression patterns similar to MligTC455_45368

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_45368	557	11.6	Mlig455_044280	Neo: - Age: -	RGP1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_044280 {REF} {Length: 2423} {TRANSSPLICED} {Pfam: Rgp1 [PF08737.12, score=118.7]} {Human: ENSG00000107185, RGP1, RGP1 homolog, RAB6A GEF complex partner 1, [RH, Score=219, Expect=4e-67]} {Mouse: ENSMUSG00000028468, Rgp1, RAB6A GEF compex partner 1, [RH, Score=212, Expect=1e-64]} {Dmel: FBgn0037297, CG1116, [RH, Score=153, Expect=5e-42]} {Celegans: WBGene00010815, M01F1.9, [RH, Score=116, Expect=4e-29]} {RNA1509_19295} {RNA1310_16608} {RNA815_12288.1}
2.	MligTC455_52302	1158	24.12	Mlig455_057337	Neo: - Age: -	PPP2R5A	0.968	-	-	-	-	-	0.968	Mlig455_057337 {REF} {Length: 3320} {TRANSSPLICED} {Pfam: Protein phosphatase 2A regulatory B subunit (B56 family) [PF01603.22, score=587.3]} {Human: ENSG00000066027, PPP2R5A, protein phosphatase 2 regulatory subunit B'alpha, [RH, Score=670, Expect=0.0]; ENSG00000154001, PPP2R5E, protein phosphatase 2 regulatory subunit B'epsilon, [RH, Score=653, Expect=0.0]} {Mouse: ENSMUSG00000026626, Ppp2r5a, protein phosphatase 2, regulatory subunit B', alpha, [RH, Score=680, Expect=0.0]; ENSMUSG00000021051, Ppp2r5e, protein phosphatase 2, regulatory subunit B', epsilon, [RH, Score=654, Expect=0.0]} {Dmel: FBgn0027492, wdb, widerborst, [RH, Score=684, Expect=0.0]} {Celegans: WBGene00012348, pptr-1, Serine/threonine-protein phosphatase 2A regulatory subunit pptr-1, [RH, Score=640, Expect=0.0]} {Smed: dd_Smed_v6_2613_0_4, dd_Smed_v6_2613_0_4, [RH, Score=716, Expect=0.0]} {RNA1509_13623, RNA1509_27958, RNA1509_3099, RNA1509_36347} {RNA1310_4841, RNA1509_13623, RNA1509_27958, RNA1509_3099, RNA1509_36347} {RNA1509_13623, RNA1509_27958, RNA1509_3099, RNA1509_36347, RNA815_2935}
3.	MligTC455_27029	560	11.67	Mlig455_007012, Mlig455_028617	Neo: - Age: - Region-enriched R4: 1.111/0.04532		0.959	-	-	-	-	-	0.959	Mlig455_007012 {REF} {Length: 347} {RNA1509_25982} {RNA1310_586.1} {RNA815_52501} Mlig455_028617 {REF} {Length: 5161} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=126.2]; Endonuclease-reverse transcriptase [PF14529.8, score=76.5]} {RNA1509_32599} {RNA1310_1659} {RNA815_252.2}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_45368

557

11.6

Mlig455_044280

Neo: -

Age: -

RGP1

1.000

MligTC455_52302

1158

24.12

Mlig455_057337

Neo: -

Age: -

PPP2R5A

0.968

Mlig455_057337 {REF} {Length: 3320} {TRANSSPLICED} {Pfam: Protein phosphatase 2A regulatory B subunit (B56 family) [PF01603.22, score=587.3]} {Human: ENSG00000066027, PPP2R5A, protein phosphatase 2 regulatory subunit B'alpha, [RH, Score=670, Expect=0.0]; ENSG00000154001, PPP2R5E, protein phosphatase 2 regulatory subunit B'epsilon, [RH, Score=653, Expect=0.0]} {Mouse: ENSMUSG00000026626, Ppp2r5a, protein phosphatase 2, regulatory subunit B', alpha, [RH, Score=680, Expect=0.0]; ENSMUSG00000021051, Ppp2r5e, protein phosphatase 2, regulatory subunit B', epsilon, [RH, Score=654, Expect=0.0]} {Dmel: FBgn0027492, wdb, widerborst, [RH, Score=684, Expect=0.0]} {Celegans: WBGene00012348, pptr-1, Serine/threonine-protein phosphatase 2A regulatory subunit pptr-1, [RH, Score=640, Expect=0.0]} {Smed: dd_Smed_v6_2613_0_4, dd_Smed_v6_2613_0_4, [RH, Score=716, Expect=0.0]} {RNA1509_13623, RNA1509_27958, RNA1509_3099, RNA1509_36347} {RNA1310_4841, RNA1509_13623, RNA1509_27958, RNA1509_3099, RNA1509_36347} {RNA1509_13623, RNA1509_27958, RNA1509_3099, RNA1509_36347, RNA815_2935}

MligTC455_27029

560

11.67

Mlig455_007012, Mlig455_028617

Neo: -

Age: -

Region-enriched R4: 1.111/0.04532

0.959

Mlig455_007012 {REF} {Length: 347} {RNA1509_25982} {RNA1310_586.1} {RNA815_52501}

Mlig455_028617 {REF} {Length: 5161} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=126.2]; Endonuclease-reverse transcriptase [PF14529.8, score=76.5]} {RNA1509_32599} {RNA1310_1659} {RNA815_252.2}