TomoSeq data search

Data search

Results for MligTC455_45417

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_45417	542	11.29	Mlig455_016432	Neo: - Age: -		Mlig455_016432 {REF} {Length: 2926} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=39.9]} {Dmel: FBgn0041171, ago, archipelago, [Score=55.8, Expect=1e-07]} {RNA1509_13340} {RNA1310_6553, RNA1509_13340} {RNA1509_13340, RNA815_12158}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_45417

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.424	3.902	0.71436	1.00000
RegionR2	0.587	3.902	0.24803	0.62554
RegionR3	-0.023	3.902	0.95867	1.00000
RegionR4	-0.265	3.902	0.57896	0.89561
RegionR5	0.605	3.902	0.10360	0.31240
RegionR6	0.307	3.902	0.47547	1.00000
RegionR7	-0.444	3.902	0.47066	1.00000
RegionR8	-0.341	3.902	0.65606	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.861	3.902	0.11276	0.83775
RegenerationR2	0.134	3.902	0.74730	0.97243
RegenerationR3	0.743	3.902	0.10923	0.52108
RegenerationR4	0.407	3.902	0.38452	0.80399
RegenerationR5	-0.141	3.902	0.73853	0.96793
RegenerationR6	0.312	3.902	0.50313	0.80840
RegenerationBL	-0.446	3.902	0.49192	0.85691
RegenerationTP	0.454	3.902	0.48667	0.89319

Genes with expression patterns similar to MligTC455_45417

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_45417	542	11.29	Mlig455_016432	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_016432 {REF} {Length: 2926} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=39.9]} {Dmel: FBgn0041171, ago, archipelago, [Score=55.8, Expect=1e-07]} {RNA1509_13340} {RNA1310_6553, RNA1509_13340} {RNA1509_13340, RNA815_12158}
2.	MligTC455_25557	551	11.49	Mlig455_049582	Neo: - Age: -	TRPM3	0.954	-	-	-	-	0.954	-	Mlig455_049582 {REF} {Length: 4592} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=61.4]; Ion transport protein [PF00520.33, score=48.7]; Ankyrin repeat [PF13606.8, score=43.3]; Ankyrin repeats (many copies) [PF13637.8, score=39.4]; Ankyrin repeats (many copies) [PF13857.8, score=36.5]; Ankyrin repeat [PF00023.32, score=32.3]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=137, Expect=9e-32]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=139, Expect=2e-32]} {Dmel: FBgn0039590, CG10011, [Score=65.5, Expect=4e-10]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=92.8, Expect=1e-18]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=178, Expect=3e-45]} {RNA1509_8224} {RNA1310_866} {RNA815_506}
3.	MligTC455_48794	1112	23.17	Mlig455_020800	Neo: - Age: Down-Up-Down	SSU72	0.952	-	-	0.952	-	-	-	Mlig455_020800 {REF} {Length: 925} {TRANSSPLICED} {Pfam: Ssu72-like protein [PF04722.15, score=280.2]} {Human: ENSG00000160075, SSU72, SSU72 homolog, RNA polymerase II CTD phosphatase, [RH, Score=276, Expect=2e-95]} {Mouse: ENSMUSG00000029038, Ssu72, Ssu72 RNA polymerase II CTD phosphatase homolog (yeast), [RH, Score=275, Expect=7e-95]} {Dmel: FBgn0031054, Ssu72, Ssu72 CTD phosphatase, [RH, Score=251, Expect=7e-86]} {Celegans: WBGene00020480, ssup-72, SSU (Yeast Suppressor of SUa7) Protein homolog, [RH, Score=228, Expect=8e-77]} {Smed: dd_Smed_v6_3141_0_1, dd_Smed_v6_3141_0_1, [RH, Score=255, Expect=1e-87]} {RNA1509_41948, RNA1509_5466} {RNA1310_34217, RNA1509_41948} {RNA1509_41948, RNA815_18154}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_45417

542

11.29

Mlig455_016432

Neo: -

Age: -

1.000

MligTC455_25557

551

11.49

Mlig455_049582

Neo: -

Age: -

TRPM3

0.954

Mlig455_049582 {REF} {Length: 4592} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=61.4]; Ion transport protein [PF00520.33, score=48.7]; Ankyrin repeat [PF13606.8, score=43.3]; Ankyrin repeats (many copies) [PF13637.8, score=39.4]; Ankyrin repeats (many copies) [PF13857.8, score=36.5]; Ankyrin repeat [PF00023.32, score=32.3]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=137, Expect=9e-32]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=139, Expect=2e-32]} {Dmel: FBgn0039590, CG10011, [Score=65.5, Expect=4e-10]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=92.8, Expect=1e-18]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=178, Expect=3e-45]} {RNA1509_8224} {RNA1310_866} {RNA815_506}

MligTC455_48794

1112

23.17

Mlig455_020800

Neo: -

Age: Down-Up-Down

SSU72

0.952

Mlig455_020800 {REF} {Length: 925} {TRANSSPLICED} {Pfam: Ssu72-like protein [PF04722.15, score=280.2]} {Human: ENSG00000160075, SSU72, SSU72 homolog, RNA polymerase II CTD phosphatase, [RH, Score=276, Expect=2e-95]} {Mouse: ENSMUSG00000029038, Ssu72, Ssu72 RNA polymerase II CTD phosphatase homolog (yeast), [RH, Score=275, Expect=7e-95]} {Dmel: FBgn0031054, Ssu72, Ssu72 CTD phosphatase, [RH, Score=251, Expect=7e-86]} {Celegans: WBGene00020480, ssup-72, SSU (Yeast Suppressor of SUa7) Protein homolog, [RH, Score=228, Expect=8e-77]} {Smed: dd_Smed_v6_3141_0_1, dd_Smed_v6_3141_0_1, [RH, Score=255, Expect=1e-87]} {RNA1509_41948, RNA1509_5466} {RNA1310_34217, RNA1509_41948} {RNA1509_41948, RNA815_18154}