Data search


search
Exact
Search

Results for MligTC455_45511

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_45511 1459 30.40 Mlig455_028150, Mlig455_028217

Neo: -

Age: -

ABL1

Mlig455_028150 {REF} {Length: 5835} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=316.8]; Protein kinase domain [PF00069.27, score=153.4]; SH2 domain [PF00017.26, score=86.2]; Variant SH3 domain [PF07653.19, score=28.0]; SH3 domain [PF00018.30, score=23.5]; Variant SH3 domain [PF14604.8, score=19.6]} {Human: ENSG00000097007, ABL1, ABL proto-oncogene 1, non-receptor tyrosine kinase, [RH, Score=538, Expect=3e-177]; ENSG00000143322, ABL2, ABL proto-oncogene 2, non-receptor tyrosine kinase, [RH, Score=530, Expect=2e-175]} {Mouse: ENSMUSG00000026842, Abl1, c-abl oncogene 1, non-receptor tyrosine kinase, [RH, Score=538, Expect=1e-177]; ENSMUSG00000026596, Abl2, v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene), [RH, Score=527, Expect=4e-174]} {Dmel: FBgn0000017, Abl, Abl tyrosine kinase, [RH, Score=546, Expect=3e-176]} {Celegans: WBGene00000018, abl-1, Tyrosine-protein kinase abl-1, [RH, Score=503, Expect=2e-163]} {Smed: dd_Smed_v6_4352_0_1, dd_Smed_v6_4352_0_1, [RH, Score=554, Expect=0.0]} {RNA1509_12891, RNA1509_40740} {RNA1310_3737, RNA1509_40740} {RNA1509_40740, RNA815_626.1}

Mlig455_028217 {REF} {Length: 2940} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=317.1]; Protein kinase domain [PF00069.27, score=153.3]; SH2 domain [PF00017.26, score=86.1]; Variant SH3 domain [PF07653.19, score=27.8]; SH3 domain [PF00018.30, score=26.1]; Variant SH3 domain [PF14604.8, score=20.7]} {Human: ENSG00000097007, ABL1, ABL proto-oncogene 1, non-receptor tyrosine kinase, [RH, Score=536, Expect=1e-176]; ENSG00000143322, ABL2, ABL proto-oncogene 2, non-receptor tyrosine kinase, [RH, Score=529, Expect=6e-175]} {Mouse: ENSMUSG00000026842, Abl1, c-abl oncogene 1, non-receptor tyrosine kinase, [RH, Score=536, Expect=4e-177]; ENSMUSG00000026596, Abl2, v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene), [RH, Score=526, Expect=8e-174]} {Dmel: FBgn0000017, Abl, Abl tyrosine kinase, [RH, Score=543, Expect=3e-175]} {Celegans: WBGene00000018, abl-1, Tyrosine-protein kinase abl-1, [RH, Score=503, Expect=2e-163]} {Smed: dd_Smed_v6_4352_0_1, dd_Smed_v6_4352_0_1, [RH, Score=551, Expect=0.0]} {RNA1509_12891} {RNA1310_3737} {RNA815_626.1}

Cumulative graph for MligTC455_45511

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.596 5.183 0.55923 1.00000
RegionR2 0.008 5.183 0.98163 1.00000
RegionR3 -0.112 5.183 0.71581 1.00000
RegionR4 0.82 5.183 0.01998 0.10208
RegionR5 -0.04 5.183 0.89369 1.00000
RegionR6 -0.261 5.183 0.41108 0.98030
RegionR7 -0.939 5.183 0.04074 0.38597
RegionR8 1.119 5.183 0.01074 0.19623

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -7.853 5.183 0.04410 0.67871
RegenerationR2 0.33 5.183 0.25587 0.70219
RegenerationR3 0.134 5.183 0.68059 0.94069
RegenerationR4 -0.558 5.183 0.09114 0.47154
RegenerationR5 0.194 5.183 0.52947 0.87466
RegenerationR6 0.2 5.183 0.54276 0.83442
RegenerationBL 0.496 5.183 0.16721 0.49010
RegenerationTP -0.028 5.183 0.94810 1.00000


Genes with expression patterns similar to MligTC455_45511

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_45511 1459 30.4 Mlig455_028150, Mlig455_028217

Neo: -

Age: -

ABL1 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_028150 {REF} {Length: 5835} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=316.8]; Protein kinase domain [PF00069.27, score=153.4]; SH2 domain [PF00017.26, score=86.2]; Variant SH3 domain [PF07653.19, score=28.0]; SH3 domain [PF00018.30, score=23.5]; Variant SH3 domain [PF14604.8, score=19.6]} {Human: ENSG00000097007, ABL1, ABL proto-oncogene 1, non-receptor tyrosine kinase, [RH, Score=538, Expect=3e-177]; ENSG00000143322, ABL2, ABL proto-oncogene 2, non-receptor tyrosine kinase, [RH, Score=530, Expect=2e-175]} {Mouse: ENSMUSG00000026842, Abl1, c-abl oncogene 1, non-receptor tyrosine kinase, [RH, Score=538, Expect=1e-177]; ENSMUSG00000026596, Abl2, v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene), [RH, Score=527, Expect=4e-174]} {Dmel: FBgn0000017, Abl, Abl tyrosine kinase, [RH, Score=546, Expect=3e-176]} {Celegans: WBGene00000018, abl-1, Tyrosine-protein kinase abl-1, [RH, Score=503, Expect=2e-163]} {Smed: dd_Smed_v6_4352_0_1, dd_Smed_v6_4352_0_1, [RH, Score=554, Expect=0.0]} {RNA1509_12891, RNA1509_40740} {RNA1310_3737, RNA1509_40740} {RNA1509_40740, RNA815_626.1}

Mlig455_028217 {REF} {Length: 2940} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=317.1]; Protein kinase domain [PF00069.27, score=153.3]; SH2 domain [PF00017.26, score=86.1]; Variant SH3 domain [PF07653.19, score=27.8]; SH3 domain [PF00018.30, score=26.1]; Variant SH3 domain [PF14604.8, score=20.7]} {Human: ENSG00000097007, ABL1, ABL proto-oncogene 1, non-receptor tyrosine kinase, [RH, Score=536, Expect=1e-176]; ENSG00000143322, ABL2, ABL proto-oncogene 2, non-receptor tyrosine kinase, [RH, Score=529, Expect=6e-175]} {Mouse: ENSMUSG00000026842, Abl1, c-abl oncogene 1, non-receptor tyrosine kinase, [RH, Score=536, Expect=4e-177]; ENSMUSG00000026596, Abl2, v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene), [RH, Score=526, Expect=8e-174]} {Dmel: FBgn0000017, Abl, Abl tyrosine kinase, [RH, Score=543, Expect=3e-175]} {Celegans: WBGene00000018, abl-1, Tyrosine-protein kinase abl-1, [RH, Score=503, Expect=2e-163]} {Smed: dd_Smed_v6_4352_0_1, dd_Smed_v6_4352_0_1, [RH, Score=551, Expect=0.0]} {RNA1509_12891} {RNA1310_3737} {RNA815_626.1}
2. MligTC455_19584 575 11.97 Mlig455_038268

Neo: -

Age: -

ATP6V1H 1.738 - - - 0.960 0.778 - Mlig455_038268 {REF} {Length: 3068} {Pfam: V-ATPase subunit H [PF03224.16, score=317.8]; V-ATPase subunit H [PF11698.10, score=154.1]; HEAT repeats [PF13646.8, score=24.4]; Armadillo/beta-catenin-like repeat [PF00514.25, score=20.3]; Armadillo-like [PF04826.15, score=18.2]} {Human: ENSG00000047249, ATP6V1H, ATPase H+ transporting V1 subunit H, [RH, Score=521, Expect=0.0]} {Mouse: ENSMUSG00000033793, Atp6v1h, ATPase, H+ transporting, lysosomal V1 subunit H, [RH, Score=525, Expect=0.0]} {Dmel: FBgn0027779, VhaSFD, Vacuolar H[+]-ATPase SFD subunit, [RH, Score=557, Expect=0.0]} {Celegans: WBGene00020507, vha-15, Probable V-type proton ATPase subunit H 2, [RH, Score=517, Expect=0.0]} {Smed: dd_Smed_v6_1452_0_1, dd_Smed_v6_1452_0_1, [RH, Score=512, Expect=2e-179]} {RNA1509_15091, RNA1509_39479, RNA1509_59511} {RNA1310_7974.1, RNA1509_15091, RNA1509_39479, RNA1509_59511} {RNA1509_15091, RNA1509_39479, RNA1509_59511, RNA815_4245}
3. MligTC455_31125 155 3.23 Mlig455_008007, Mlig455_014887, Mlig455_024799, Mlig455_025170, Mlig455_030989, Mlig455_063058, Mlig455_063926

Neo: -

Age: Up-Down-Down

1.697 - - - - 0.743 0.954

Mlig455_008007 {REF} {Length: 1549} {Pfam: Phage integrase family [PF00589.24, score=24.1]} {RNA1509_25737} {RNA1310_2048} {RNA815_551.1}

Mlig455_014887 {REF} {Length: 1624} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=24.4]} {RNA1509_39688} {RNA1310_6142.1} {RNA815_6750.1}

Mlig455_024799 {REF} {Length: 914} {Pfam: SAP domain [PF02037.29, score=34.8]} {RNA1509_25737} {RNA1310_2048} {RNA815_45578}

Mlig455_025170 {REF} {Length: 4287} {Pfam: SAP domain [PF02037.29, score=33.3]} {RNA1509_25737, RNA1509_8239} {RNA1310_2048, RNA1509_25737, RNA1509_8239} {RNA1509_25737, RNA1509_8239, RNA815_551.1}

Mlig455_030989 {REF} {Length: 656} {Pfam: SAP domain [PF02037.29, score=32.8]; Phage integrase family [PF00589.24, score=22.3]} {RNA1509_25737} {RNA1310_2048} {RNA815_551.1}

Mlig455_063058 {REF} {Length: 1630} {Pfam: SAP domain [PF02037.29, score=32.8]; Phage integrase family [PF00589.24, score=22.3]} {RNA1509_25737} {RNA1310_2048} {RNA815_551.1}

Mlig455_063926 {REF} {Length: 638} {Pfam: SAP domain [PF02037.29, score=34.3]} {RNA1509_25737} {RNA1310_2048} {RNA815_45578}
4. MligTC455_41299 378 7.87 Mlig455_020176

Neo: -

Age: -

CLK2 0.954 - - - - 0.954 - Mlig455_020176 {REF} {Length: 2938} {Pfam: Protein kinase domain [PF00069.27, score=156.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=83.4]} {Human: ENSG00000176444, CLK2, CDC like kinase 2, [RH, Score=470, Expect=4e-159]; ENSG00000261893, CLK2, CDC like kinase 2, [RH, Score=470, Expect=4e-159]; ENSG00000179335, CLK3, CDC like kinase 3, [RH, Score=450, Expect=4e-149]} {Mouse: ENSMUSG00000068917, Clk2, CDC-like kinase 2, [RH, Score=473, Expect=4e-160]} {Dmel: FBgn0265998, Doa, Darkener of apricot, [RH, Score=495, Expect=6e-155]} {Celegans: WBGene00006517, madd-3, [RH, Score=439, Expect=2e-142]} {Smed: dd_Smed_v6_8461_0_1, dd_Smed_v6_8461_0_1, [RH, Score=530, Expect=2e-179]} {RNA1509_12578} {RNA1310_7050, RNA1509_12578} {RNA1509_12578, RNA815_3787}
5. MligTC455_53249 690 14.38 Mlig455_027272, Mlig455_027319

Neo: -

Age: -

Region-enriched R5: 1.274/0.02479

WBP4 0.954 - - - - 0.954 -

Mlig455_027272 {REF} {Length: 1151} {TRANSSPLICED} {Pfam: WW domain [PF00397.28, score=42.3]; U1 zinc finger [PF06220.14, score=41.5]} {Human: ENSG00000120688, WBP4, WW domain binding protein 4, [Score=83.6, Expect=1e-17]} {Mouse: ENSMUSG00000022023, Wbp4, WW domain binding protein 4, [Score=88.6, Expect=1e-19]} {Dmel: FBgn0031287, CG4291, [RH, Score=91.3, Expect=5e-21]} {Smed: dd_Smed_v6_10030_0_6, dd_Smed_v6_10030_0_6, [RH, Score=87.4, Expect=1e-20]} {RNA1509_46002} {RNA1310_29789} {RNA815_12245}

Mlig455_027319 {REF} {Length: 1127} {TRANSSPLICED} {Pfam: WW domain [PF00397.28, score=42.3]; U1 zinc finger [PF06220.14, score=41.5]} {Human: ENSG00000120688, WBP4, WW domain binding protein 4, [Score=81.6, Expect=5e-17]} {Mouse: ENSMUSG00000022023, Wbp4, WW domain binding protein 4, [Score=88.2, Expect=1e-19]} {Dmel: FBgn0031287, CG4291, [RH, Score=91.3, Expect=7e-21]} {Smed: dd_Smed_v6_10030_0_6, dd_Smed_v6_10030_0_6, [RH, Score=87.4, Expect=1e-20]} {RNA1509_46002} {RNA1310_29789} {RNA815_12245}
6. MligTC455_43795 837 17.43 Mlig455_017342

Neo: -

Age: logFC(26M/2M)=-0.242

0.952 - - - 0.952 - - Mlig455_017342 {REF} {Length: 4372} {RNA1509_16184} {RNA1310_21121} {RNA815_4280.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA