Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_45596 | 142 | 2.96 | Mlig455_049339 | Neo: - Age: Down-Down-Up |
Mlig455_049339 {REF} {Length: 1040} {RNA1310_45744} {RNA815_56662} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -4.325 | 2.333 | 1.00000 | 1.00000 | |
RegionR2 | 3.2 | 2.333 | 0.05274 | 0.27486 | |
RegionR3 | 1.343 | 2.333 | 0.34543 | 0.88054 | |
RegionR4 | 0.802 | 2.333 | 0.58414 | 0.89992 | |
RegionR5 | 1.336 | 2.333 | 0.31234 | 0.65123 | |
RegionR6 | 1.171 | 2.333 | 0.40494 | 0.97493 | |
RegionR7 | -0.17 | 2.333 | 0.82078 | 1.00000 | |
RegionR8 | -3.357 | 2.333 | 0.99982 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | 4.303 | 2.333 | 0.47439 | 1.00000 | |
RegenerationR2 | -3.006 | 2.333 | 0.01352 | 0.19019 | |
RegenerationR3 | 0.18 | 2.333 | 0.88989 | 1.00000 | |
RegenerationR4 | 0.072 | 2.333 | 0.89851 | 1.00000 | |
RegenerationR5 | 0.673 | 2.333 | 0.59297 | 0.90688 | |
RegenerationR6 | -0.344 | 2.333 | 0.79260 | 0.97354 | |
RegenerationBL | 0.512 | 2.333 | 0.69422 | 1.00000 | |
RegenerationTP | 1.952 | 2.333 | 0.41186 | 0.83839 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_45596 | 142 | 2.96 | Mlig455_049339 | Neo: - Age: Down-Down-Up |
5 | 1.000 | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_049339 {REF} {Length: 1040} {RNA1310_45744} {RNA815_56662} | |
2. | MligTC455_44027 | 2077 | 43.27 | Mlig455_023794, Mlig455_066345 | Neo: - Age: Up-Down-Up Region-enriched R2: 5.334/0.00002 |
3.373 | - | - | 0.821 | 0.831 | 0.952 | 0.769 | Mlig455_023794 {REF} {Length: 4844} {RNA1509_18615} {RNA1310_25864.1, RNA1509_18615} {RNA1509_18615, RNA815_25315} Mlig455_066345 {REF} {Length: 5051} {RNA1509_18615, RNA1509_45291} {RNA1310_25864.1, RNA1509_45291} {RNA1509_45291, RNA815_25315} |
|
3. | MligTC455_32563 | 900 | 18.74 | Mlig455_021721 | Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.879 Region-enriched R2: 4.965/0.00011 |
3.155 | 0.735 | - | 0.744 | 0.723 | 0.953 | - | Mlig455_021721 {REF} {Length: 1079} {RNA1509_570} {RNA1310_40828} {RNA815_5866.1} | |
4. | MligTC455_48661 | 237 | 4.93 | Mlig455_068424 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.428 Region-enriched R2: 3.510/0.00102 |
BMP1 | 2.532 | 0.966 | - | 0.828 | 0.738 | - | - | Mlig455_068424 {REF} {Length: 2174} {Pfam: CUB domain [PF00431.22, score=56.8]} {Human: ENSG00000168487, BMP1, bone morphogenetic protein 1, [Score=72.4, Expect=3e-13]} {Mouse: ENSMUSG00000022098, Bmp1, bone morphogenetic protein 1, [Score=73.2, Expect=1e-13]} {Dmel: FBgn0004885, tok, tolkin, [Score=60.1, Expect=2e-09]} {Celegans: WBGene00003555, nas-39, Zinc metalloproteinase nas-39, [Score=58.5, Expect=4e-09]} {Smed: dd_Smed_v6_5652_0_1, dd_Smed_v6_5652_0_1, [Score=61.2, Expect=4e-10]} {RNA1509_45794} {RNA1310_14080.1, RNA1509_45794} {RNA1509_45794, RNA815_14641.1} |
5. | MligTC455_46777 | 1781 | 37.1 | Mlig455_004263, Mlig455_004313, Mlig455_004332 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.342 Region-specific R2: 8.084 Region-enriched R2: 11.704/0.00000 |
2.466 | - | - | 0.706 | 0.796 | 0.964 | - | Mlig455_004263 {REF} {Length: 893} {RNA1509_28081} {RNA1310_35014} {RNA815_16619} Mlig455_004313 {REF} {Length: 901} {RNA1509_15156} {RNA1310_35014} {RNA815_16619} Mlig455_004332 {REF} {Length: 1003} {RNA1509_15156, RNA1509_28081} {RNA1310_35014, RNA1509_15156, RNA1509_28081} {RNA1509_15156, RNA1509_28081, RNA815_16619} |
|
6. | MligTC455_37989 | 83 | 1.72 | Mlig455_018192 | Neo: - Age: - |
2.438 | 0.971 | - | 0.756 | 0.711 | - | - | Mlig455_018192 {REF} {Length: 1275} {Pfam: EF-hand domain pair [PF13499.8, score=36.8]; EF-hand domain [PF13405.8, score=31.2]; EF hand [PF00036.34, score=29.3]; EF-hand domain pair [PF13833.8, score=20.5]; EF hand [PF13202.8, score=19.4]} {Smed: dd_Smed_v6_1010_0_1, dd_Smed_v6_1010_0_1, [Score=105, Expect=6e-27]} {RNA1310_31713.1} {RNA815_36423} | |
7. | MligTC455_37025 | 209 | 4.34 | Mlig455_029443 | Neo: - |
1.854 | 0.973 | - | - | - | 0.881 | - | Mlig455_029443 {REF} {Length: 893} {RNA1310_43520} {RNA815_2407} | |
8. | MligTC455_47736 | 1775 | 36.98 | Mlig455_054650 | Neo: - Age: logFC(26M/2M)=-0.375 Region-enriched R3: 5.288/0.00000 |
1.771 | - | - | - | 0.810 | 0.961 | - | Mlig455_054650 {REF} {Length: 1247} {Pfam: Domain of unknown function (DUF4573) [PF15140.8, score=86.5]} {RNA1509_13769, RNA1509_51431} {RNA1310_40941.1, RNA1509_13769, RNA1509_51431} {RNA1509_13769, RNA1509_51431, RNA815_34286.1} | |
9. | MligTC455_40791 | 75 | 1.56 | Mlig455_013501 | Neo: - Age: - Region-enriched R2: 7.804/0.01222 |
1.739 | 0.976 | - | - | 0.763 | - | - | Mlig455_013501 {REF} {Length: 2310} {Pfam: WSC domain [PF01822.21, score=57.5]; F5/8 type C domain [PF00754.27, score=52.4]; Clip-domain serine protease homolog Scarface [PF18399.3, score=20.3]} {Smed: dd_Smed_v6_52492_0_1, dd_Smed_v6_52492_0_1, [Score=58.5, Expect=2e-10]} {RNA1509_16751} {RNA1310_14302.1} {RNA815_6113.1} | |
10. | MligTC455_34233 | 101 | 2.11 | Mlig455_053145 | Neo: - Age: Down-Up-Down |
ACR | 1.725 | - | - | - | - | 0.953 | 0.772 | Mlig455_053145 {REF} {Length: 1245} {Pfam: Trypsin [PF00089.28, score=175.3]} {Human: ENSG00000100312, ACR, acrosin, [Score=161, Expect=1e-45]; ENSG00000283539, ACR, acrosin, [Score=161, Expect=1e-45]; ENSG00000122194, PLG, plasminogen, [Score=156, Expect=8e-42]; ENSG00000198670, LPA, lipoprotein(a), [Score=155, Expect=2e-41]; ENSG00000178297, TMPRSS9, transmembrane serine protease 9, [Score=154, Expect=3e-41]} {Mouse: ENSMUSG00000059481, Plg, plasminogen, [Score=152, Expect=1e-40]; ENSMUSG00000059406, Tmprss9, transmembrane protease, serine 9, [Score=151, Expect=4e-40]; ENSMUSG00000016942, Tmprss6, transmembrane serine protease 6, [Score=149, Expect=1e-39]; ENSMUSG00000033177, Tmprss7, transmembrane serine protease 7, [Score=145, Expect=4e-38]} {Dmel: FBgn0036287, CG10663, [Score=132, Expect=6e-34]} {Celegans: WBGene00006619, try-1, TRYpsin-like protease, [Score=125, Expect=2e-33]} {Smed: dd_Smed_v6_2492_0_1, dd_Smed_v6_2492_0_1, [Score=175, Expect=3e-52]} {RNA1509_37786} {RNA1310_26421} {RNA815_13601} |
11. | MligTC455_14125 | 432 | 9.01 | Mlig455_031050 | Neo: - Age: Up-Down-Down, logFC(26M/2M)=-1.941 Region-specific R2: 7.318 Region-enriched R2: 7.339/0.00000 |
OTOG | 1.724 | - | - | 0.765 | - | 0.959 | - | Mlig455_031050 {REF} {Length: 2951} {Pfam: Spondin-like TSP1 domain [PF19028.2, score=32.8]; Pacifastin inhibitor (LCMII) [PF05375.15, score=25.4]} {Human: ENSG00000188162, OTOG, otogelin, [Score=49.3, Expect=6e-06]} {Mouse: ENSMUSG00000029797, Sspo, SCO-spondin, [Score=53.9, Expect=1e-07]} {Smed: dd_Smed_v6_628_0_1, dd_Smed_v6_628_0_1, [Score=117, Expect=3e-29]} {RNA1509_2451} {RNA1310_3554.1} {RNA815_1109} |
12. | MligTC455_32213 | 57 | 1.19 | Mlig455_028334 | Neo: - |
TMEM106A | 1.714 | - | - | 0.958 | - | - | 0.756 | Mlig455_028334 {REF} {Length: 1793} {Pfam: Protein of unknown function (DUF1356) [PF07092.14, score=98.8]; Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=40.9]} {Human: ENSG00000184988, TMEM106A, transmembrane protein 106A, [Score=79.3, Expect=2e-16]} {Mouse: ENSMUSG00000034947, Tmem106a, transmembrane protein 106A, [Score=77.4, Expect=2e-15]} {Smed: dd_Smed_v6_31564_0_1, dd_Smed_v6_31564_0_1, [Score=77.4, Expect=2e-15]} {RNA1509_59079} {RNA1310_49081} {RNA815_12536.1} |
13. | MligTC455_32214 | 54 | 1.12 | Mlig455_066151 | Neo: - |
TMEM106A | 1.711 | - | - | 0.956 | - | - | 0.755 | Mlig455_066151 {REF} {Length: 2201} {Pfam: Protein of unknown function (DUF1356) [PF07092.14, score=131.0]; Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=40.9]} {Human: ENSG00000184988, TMEM106A, transmembrane protein 106A, [RH, Score=105, Expect=3e-25]} {Mouse: ENSMUSG00000034947, Tmem106a, transmembrane protein 106A, [RH, Score=103, Expect=2e-24]} {Smed: dd_Smed_v6_4858_0_1, dd_Smed_v6_4858_0_1, [RH, Score=86.7, Expect=2e-19]} {RNA1509_19769} {RNA1310_22674} {RNA815_8636} |
14. | MligTC455_49557 | 280 | 5.82 | Mlig455_017273 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.728 Region-specific R2: 3.642 Region-enriched R2: 3.187/0.00196 |
1.711 | 0.958 | - | 0.753 | - | - | - | Mlig455_017273 {REF} {Length: 1333} {RNA1509_52848} {RNA1310_64923, RNA1509_52848} {RNA1509_52848, RNA815_51063} | |
15. | MligTC455_19803 | 48 | 1 | Mlig455_020073, Mlig455_040876, Mlig455_066459, Mlig455_066460 | Neo: - Age: - |
KREMEN1, KREMEN2 | 1.705 | 0.970 | - | - | - | - | 0.735 | Mlig455_020073 {REF} {Length: 1139} {Pfam: WSC domain [PF01822.21, score=54.9]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=50.8, Expect=5e-07]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=59.7, Expect=4e-10]} {RNA1509_53783} {RNA1310_60562} {RNA815_37853} Mlig455_040876 {REF} {Length: 898} {Pfam: WSC domain [PF01822.21, score=61.5]; PAN domain [PF00024.28, score=19.4]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=48.1, Expect=3e-06]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=57.8, Expect=1e-09]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=63.9, Expect=6e-12]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=45.4, Expect=9e-06]} {RNA1509_53783} {RNA1310_60562} {RNA815_37853} Mlig455_066459 {REF} {Length: 1488} {Pfam: WSC domain [PF01822.21, score=54.9]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=50.8, Expect=5e-07]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=59.7, Expect=4e-10]} {RNA1509_53783} {RNA1310_60562} {RNA815_37853} Mlig455_066460 {REF} {Length: 2320} {Pfam: WSC domain [PF01822.21, score=57.3]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=47.8, Expect=6e-06]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=60.5, Expect=2e-10]} {RNA1509_53783} {RNA1310_60562} {RNA815_37853} |
16. | MligTC455_47737 | 3850 | 80.21 | Mlig455_057642, Mlig455_060148 | Neo: - Age: - Region-enriched R3: 5.960/0.00000 |
1.692 | - | - | - | 0.733 | 0.959 | - | Mlig455_057642 {REF} {Length: 1075} {Pfam: Domain of unknown function (DUF4573) [PF15140.8, score=81.5]} {RNA1509_32190, RNA1509_39145, RNA1509_51431} {RNA1310_40941.1, RNA1509_32190, RNA1509_39145} {RNA1509_32190, RNA1509_39145, RNA815_34286.1} Mlig455_060148 {REF} {Length: 1301} {Pfam: Domain of unknown function (DUF4573) [PF15140.8, score=122.2]} {RNA1509_39145} {RNA1310_40941.1} {RNA815_34286.1} |
|
17. | MligTC455_14126 | 1888 | 39.32 | Mlig455_031057 | Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-1.763 Region-specific R2: 6.685 Region-enriched R2: 8.246/0.00000 Regeneration-downregulated R2: -3.933 Regeneration-depleted R2: -3.933 |
SSPO | 1.683 | - | - | 0.729 | - | 0.954 | - | Mlig455_031057 {REF} {Length: 3178} {Pfam: Spondin-like TSP1 domain [PF19028.2, score=118.7]; Thrombospondin type 1 domain [PF00090.21, score=76.9]; Trypsin Inhibitor like cysteine rich domain [PF01826.19, score=46.2]; CCN3 Nov like TSP1 domain [PF19035.2, score=19.7]} {Human: ENSG00000197558, SSPO, SCO-spondin, [Score=115, Expect=2e-25]} {Mouse: ENSMUSG00000029797, Sspo, SCO-spondin, [Score=113, Expect=9e-25]} {Dmel: FBgn0026721, fat-spondin, [Score=65.5, Expect=2e-10]} {Celegans: WBGene00006893, spon-1, SPONdin (Extracellular matrix glycoprotein) family, [Score=74.3, Expect=3e-13]} {Smed: dd_Smed_v6_628_0_1, dd_Smed_v6_628_0_1, [RH, Score=487, Expect=3e-156]} {RNA1509_2451} {RNA1310_3554.1} {RNA815_1109} |
18. | MligTC455_36371 | 1892 | 39.41 | Mlig455_005636 | Neo: - Age: Down-Down-Up Region-enriched R2: 7.119/0.00007 |
C6orf120 | 1.67 | - | - | - | - | 0.954 | 0.716 | Mlig455_005636 {REF} {Length: 4589} {TRANSSPLICED} {Pfam: Putative cytokine, C6ORF120 [PF17065.7, score=46.3]} {Human: ENSG00000185127, C6orf120, chromosome 6 open reading frame 120, [Score=52.8, Expect=5e-08]} {Mouse: ENSMUSG00000050088, 1600012H06Rik, RIKEN cDNA 1600012H06 gene, [Score=52.4, Expect=5e-08]} {RNA1509_33302, RNA1509_46654} {RNA1310_15958, RNA1509_46654} {RNA1509_46654, RNA815_10779} |
19. | MligTC455_11473 | 248 | 5.17 | Mlig455_009711, Mlig455_071036 | Neo: - Age: Down-Up-Down |
CHRNA3 | 0.973 | 0.973 | - | - | - | - | - | Mlig455_009711 {REF} {Length: 2402} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=241.4]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=222.9]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=391, Expect=2e-130]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=379, Expect=6e-126]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=375, Expect=2e-124]} {Mouse: ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=390, Expect=2e-130]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=375, Expect=2e-124]} {Dmel: FBgn0000038, nAChRbeta1, nicotinic Acetylcholine Receptor beta1, [RH, Score=499, Expect=9e-173]} {Celegans: WBGene00000043, acr-3, Acetylcholine receptor subunit beta-type acr-3, [RH, Score=426, Expect=6e-145]} {Smed: dd_Smed_v6_12146_0_1, dd_Smed_v6_12146_0_1, [Score=510, Expect=1e-176]} {RNA1509_48201} {RNA1310_10118} {RNA815_29940} Mlig455_071036 {REF} {Length: 746} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=28.1]} {Dmel: FBgn0000038, nAChRbeta1, nicotinic Acetylcholine Receptor beta1, [Score=63.5, Expect=2e-13]} {Celegans: WBGene00000042, acr-2, Acetylcholine receptor subunit beta-type acr-2, [Score=63.9, Expect=9e-14]} {Smed: dd_Smed_v6_12535_0_1, dd_Smed_v6_12535_0_1, [Score=64.3, Expect=6e-14]} {RNA1310_21182} {RNA815_29940} |
20. | MligTC455_53382 | 110 | 2.28 | Mlig455_006777 | Neo: - Age: - |
0.959 | 0.959 | - | - | - | - | - | Mlig455_006777 {REF} {Length: 2841} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=54.8]} {Dmel: FBgn0039747, AdoR, Adenosine receptor, [Score=48.9, Expect=1e-05]} {Smed: dd_Smed_v6_8885_0_1, dd_Smed_v6_8885_0_1, [Score=137, Expect=6e-36]} {RNA1509_47534} {RNA1310_15311} {RNA815_12841} | |
21. | MligTC455_45565 | 35 | 0.73 | Mlig455_017877 | Neo: - Age: - Region-enriched R6: 7.343/0.00026 |
ARF3 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_017877 {REF} {Length: 924} {Pfam: ADP-ribosylation factor family [PF00025.23, score=210.6]; Ras family [PF00071.24, score=57.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=55.4]; Signal recognition particle receptor beta subunit [PF09439.12, score=40.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=32.9]; G-protein alpha subunit [PF00503.22, score=32.2]; 50S ribosome-binding GTPase [PF01926.25, score=21.2]} {Human: ENSG00000134287, ARF3, ADP ribosylation factor 3, [Score=214, Expect=3e-71]; ENSG00000143761, ARF1, ADP ribosylation factor 1, [Score=213, Expect=1e-70]; ENSG00000004059, ARF5, ADP ribosylation factor 5, [Score=204, Expect=5e-67]} {Mouse: ENSMUSG00000051853, Arf3, ADP-ribosylation factor 3, [Score=214, Expect=2e-71]; ENSMUSG00000048076, Arf1, ADP-ribosylation factor 1, [Score=213, Expect=7e-71]; ENSMUSG00000062421, Arf2, ADP-ribosylation factor 2, [Score=213, Expect=5e-71]; ENSMUSG00000020440, Arf5, ADP-ribosylation factor 5, [Score=204, Expect=3e-67]} {Dmel: FBgn0010348, Arf79F, ADP ribosylation factor at 79F, [Score=216, Expect=2e-72]} {Celegans: WBGene00000183, arf-3, ADP-Ribosylation Factor related; ADP-ribosylation factor related (20.5 kD) (Arf-3), [Score=213, Expect=4e-71]} {Smed: dd_Smed_v6_3383_0_1, dd_Smed_v6_3383_0_1, [RH, Score=227, Expect=1e-76]} {RNA1509_57358} {RNA1310_37939} {RNA815_20725} |
22. | MligTC455_57459 | 3 | 0.07 | Mlig455_062214 | Neo: - Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_062214 {REF} {Length: 266} {NoTransDecoderORF} {RNA1310_39715} | |
23. | MligTC455_40365 | 195 | 4.05 | Mlig455_038370 | Neo: - Age: Down-Up-Down Region-enriched R2: 3.989/0.00156 |
0.956 | 0.956 | - | - | - | - | - | Mlig455_038370 {REF} {Length: 3062} {RNA1509_57598} {RNA1310_48414, RNA1509_57598} {RNA1509_57598, RNA815_41099} | |
24. | MligTC455_32215 | 57 | 1.19 | Mlig455_066177 | Neo: - Age: - |
TMEM106A | 0.954 | - | - | 0.954 | - | - | - | Mlig455_066177 {REF} {Length: 2186} {Pfam: Protein of unknown function (DUF1356) [PF07092.14, score=130.1]; Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=38.7]} {Human: ENSG00000184988, TMEM106A, transmembrane protein 106A, [RH, Score=103, Expect=3e-25]} {Mouse: ENSMUSG00000034947, Tmem106a, transmembrane protein 106A, [RH, Score=102, Expect=8e-25]} {Smed: dd_Smed_v6_4858_0_1, dd_Smed_v6_4858_0_1, [RH, Score=85.9, Expect=2e-19]} {RNA1509_59079} {RNA1310_22944} {RNA815_8636} |