TomoSeq data search

Data search

Results for MligTC455_45619

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_45619	758	15.78	Mlig455_036890	Neo: - Age: -	GORASP2	Mlig455_036890 {REF} {Length: 1795} {Pfam: GRASP55/65 PDZ-like domain [PF04495.16, score=243.4]; PDZ domain [PF17820.3, score=31.7]; PDZ domain [PF13180.8, score=28.1]} {Human: ENSG00000115806, GORASP2, golgi reassembly stacking protein 2, [RH, Score=319, Expect=2e-106]} {Mouse: ENSMUSG00000014959, Gorasp2, golgi reassembly stacking protein 2, [RH, Score=319, Expect=3e-106]} {Dmel: FBgn0036919, Grasp65, [RH, Score=318, Expect=6e-106]} {Celegans: WBGene00021536, Y42H9AR.1, [RH, Score=306, Expect=6e-101]} {Smed: dd_Smed_v6_1209_0_1, dd_Smed_v6_1209_0_1, [RH, Score=318, Expect=5e-108]} {RNA1509_29026} {RNA1310_12973} {RNA815_7712.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_45619

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.427	4.194	0.67897	1.00000
RegionR2	0.332	4.194	0.52089	0.89524
RegionR3	-0.064	4.194	0.88860	1.00000
RegionR4	-0.183	4.194	0.67646	0.97163
RegionR5	0.21	4.194	0.57615	0.93461
RegionR6	1.031	4.194	0.01020	0.17002
RegionR7	0.598	4.194	0.26585	0.89557
RegionR8	-1.497	4.194	0.10112	0.59606

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.421	4.194	0.74505	1.00000
RegenerationR2	0.744	4.194	0.07456	0.44146
RegenerationR3	0.864	4.194	0.05934	0.41559
RegenerationR4	0.7	4.194	0.10899	0.50777
RegenerationR5	0.789	4.194	0.05785	0.38360
RegenerationR6	0.055	4.194	0.89716	1.00000
RegenerationBL	1.484	4.194	0.00307	0.04768
RegenerationTP	0.584	4.194	0.40548	0.83343

Genes with expression patterns similar to MligTC455_45619

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_45619	758	15.78	Mlig455_036890	Neo: - Age: -	GORASP2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_036890 {REF} {Length: 1795} {Pfam: GRASP55/65 PDZ-like domain [PF04495.16, score=243.4]; PDZ domain [PF17820.3, score=31.7]; PDZ domain [PF13180.8, score=28.1]} {Human: ENSG00000115806, GORASP2, golgi reassembly stacking protein 2, [RH, Score=319, Expect=2e-106]} {Mouse: ENSMUSG00000014959, Gorasp2, golgi reassembly stacking protein 2, [RH, Score=319, Expect=3e-106]} {Dmel: FBgn0036919, Grasp65, [RH, Score=318, Expect=6e-106]} {Celegans: WBGene00021536, Y42H9AR.1, [RH, Score=306, Expect=6e-101]} {Smed: dd_Smed_v6_1209_0_1, dd_Smed_v6_1209_0_1, [RH, Score=318, Expect=5e-108]} {RNA1509_29026} {RNA1310_12973} {RNA815_7712.1}
2.	MligTC455_49580	900	18.76	Mlig455_002486	Neo: - Age: Down-Down-Up	NOCT	1.693	-	-	-	0.720	0.973	-	Mlig455_002486 {REF} {Length: 2303} {TRANSSPLICED} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=52.0]} {Human: ENSG00000151014, NOCT, nocturnin, [RH, Score=160, Expect=5e-45]} {Mouse: ENSMUSG00000023087, Noct, nocturnin, [RH, Score=164, Expect=5e-47]} {Dmel: FBgn0261808, cu, curled, [RH, Score=156, Expect=3e-42]} {Smed: dd_Smed_v6_11463_0_1, dd_Smed_v6_11463_0_1, [Score=65.9, Expect=1e-11]} {RNA1509_12828, RNA1509_14443, RNA1509_43001} {RNA1310_22622.1, RNA1509_12828, RNA1509_14443, RNA1509_43001} {RNA1509_12828, RNA1509_14443, RNA1509_43001, RNA815_6457}
3.	MligTC455_28184	2226	46.37	Mlig455_022004, Mlig455_052045	Neo: - Age: Up-Down-Up	PIF1	0.952	-	-	-	-	-	0.952	Mlig455_022004 {REF} {Length: 11399} {TRANSSPLICED} {Pfam: PIF1-like helicase [PF05970.16, score=121.0]; Helitron helicase-like domain at N-terminus [PF14214.8, score=94.6]; AAA domain [PF13604.8, score=53.4]; AAA domain [PF13245.8, score=28.9]; Helicase [PF02689.16, score=24.7]; UvrD-like helicase C-terminal domain [PF13538.8, score=24.1]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=130, Expect=4e-30]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=134, Expect=1e-31]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=129, Expect=3e-30]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=132, Expect=1e-31]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=128, Expect=6e-30]} {RNA1509_46} {RNA1310_143.1} {RNA815_104.1} Mlig455_052045 {REF} {Length: 10803} {TRANSSPLICED} {Pfam: PIF1-like helicase [PF05970.16, score=120.8]; Helitron helicase-like domain at N-terminus [PF14214.8, score=94.4]; AAA domain [PF13604.8, score=54.2]; AAA domain [PF13245.8, score=28.8]; Helicase [PF02689.16, score=24.6]; UvrD-like helicase C-terminal domain [PF13538.8, score=23.9]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=130, Expect=3e-30]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=134, Expect=1e-31]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=130, Expect=3e-30]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=133, Expect=1e-31]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=128, Expect=8e-30]} {RNA1509_29468, RNA1509_46} {RNA1310_143.1, RNA1509_29468, RNA1509_46} {RNA1509_29468, RNA1509_46, RNA815_104.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_45619

758

15.78

Mlig455_036890

Neo: -

Age: -

GORASP2

1.000

MligTC455_49580

900

18.76

Mlig455_002486

Neo: -

Age: Down-Down-Up

NOCT

1.693

0.720

0.973

Mlig455_002486 {REF} {Length: 2303} {TRANSSPLICED} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=52.0]} {Human: ENSG00000151014, NOCT, nocturnin, [RH, Score=160, Expect=5e-45]} {Mouse: ENSMUSG00000023087, Noct, nocturnin, [RH, Score=164, Expect=5e-47]} {Dmel: FBgn0261808, cu, curled, [RH, Score=156, Expect=3e-42]} {Smed: dd_Smed_v6_11463_0_1, dd_Smed_v6_11463_0_1, [Score=65.9, Expect=1e-11]} {RNA1509_12828, RNA1509_14443, RNA1509_43001} {RNA1310_22622.1, RNA1509_12828, RNA1509_14443, RNA1509_43001} {RNA1509_12828, RNA1509_14443, RNA1509_43001, RNA815_6457}

MligTC455_28184

2226

46.37

Mlig455_022004, Mlig455_052045

Neo: -

Age: Up-Down-Up

PIF1

0.952

Mlig455_022004 {REF} {Length: 11399} {TRANSSPLICED} {Pfam: PIF1-like helicase [PF05970.16, score=121.0]; Helitron helicase-like domain at N-terminus [PF14214.8, score=94.6]; AAA domain [PF13604.8, score=53.4]; AAA domain [PF13245.8, score=28.9]; Helicase [PF02689.16, score=24.7]; UvrD-like helicase C-terminal domain [PF13538.8, score=24.1]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=130, Expect=4e-30]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=134, Expect=1e-31]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=129, Expect=3e-30]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=132, Expect=1e-31]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=128, Expect=6e-30]} {RNA1509_46} {RNA1310_143.1} {RNA815_104.1}

Mlig455_052045 {REF} {Length: 10803} {TRANSSPLICED} {Pfam: PIF1-like helicase [PF05970.16, score=120.8]; Helitron helicase-like domain at N-terminus [PF14214.8, score=94.4]; AAA domain [PF13604.8, score=54.2]; AAA domain [PF13245.8, score=28.8]; Helicase [PF02689.16, score=24.6]; UvrD-like helicase C-terminal domain [PF13538.8, score=23.9]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=130, Expect=3e-30]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=134, Expect=1e-31]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=130, Expect=3e-30]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=133, Expect=1e-31]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=128, Expect=8e-30]} {RNA1509_29468, RNA1509_46} {RNA1310_143.1, RNA1509_29468, RNA1509_46} {RNA1509_29468, RNA1509_46, RNA815_104.1}