TomoSeq data search

Data search

Results for MligTC455_45632

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_45632

10

0.21

Mlig455_030828

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=-0.494

IRF2

Mlig455_030828 {REF} {Length: 2573} {Pfam: Interferon regulatory factor transcription factor [PF00605.19, score=65.5]} {Human: ENSG00000168310, IRF2, interferon regulatory factor 2, [RH, Score=55.8, Expect=9e-09]} {Mouse: ENSMUSG00000031627, Irf2, interferon regulatory factor 2, [RH, Score=55.8, Expect=6e-09]} {RNA1509_40698} {RNA1310_29079} {RNA815_23289}

Cumulative graph for MligTC455_45632

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.394	0.734	0.99967	1.00000
RegionR2	0.691	0.734	0.99965	1.00000
RegionR3	2.492	0.734	0.02849	0.28896
RegionR4	1.739	0.734	0.36966	0.69289
RegionR5	1.401	0.734	0.21385	0.51199
RegionR6	-1.178	0.734	0.99966	1.00000
RegionR7	-1.409	0.734	0.99968	1.00000
RegionR8	-1.343	0.734	0.99971	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	3.081	0.734	0.99994	1.00000
RegenerationR2	1.408	0.734	0.99989	1.00000
RegenerationR3	1.605	0.734	0.09864	0.50190
RegenerationR4	0.932	0.734	0.18311	0.62419
RegenerationR5	1.766	0.734	0.05620	0.37918
RegenerationR6	2.644	0.734	0.99986	1.00000
RegenerationBL	2.347	0.734	0.99992	1.00000
RegenerationTP	1.939	0.734	0.99992	1.00000

Genes with expression patterns similar to MligTC455_45632

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_45632	10	0.21	Mlig455_030828	Neo: - Age: Up-Up-Down, logFC(26M/2M)=-0.494	IRF2	1	-	-	-	-	-	1.000	Mlig455_030828 {REF} {Length: 2573} {Pfam: Interferon regulatory factor transcription factor [PF00605.19, score=65.5]} {Human: ENSG00000168310, IRF2, interferon regulatory factor 2, [RH, Score=55.8, Expect=9e-09]} {Mouse: ENSMUSG00000031627, Irf2, interferon regulatory factor 2, [RH, Score=55.8, Expect=6e-09]} {RNA1509_40698} {RNA1310_29079} {RNA815_23289}
2.	MligTC455_11133	24	0.5	Mlig455_036188	Neo: Int S/G2/M Age: -		0.963	-	-	-	-	-	0.963	Mlig455_036188 {REF} {Length: 1185} {NoTransDecoderORF} {RNA1509_60021} {RNA1310_108053} {RNA815_10011.1}
3.	MligTC455_06788	28	0.59	Mlig455_003273, Mlig455_014182, Mlig455_037567, Mlig455_046981	Neo: - Age: Down-Up-Down Region-enriched R5: 5.138/0.00867		0.958	-	-	-	-	-	0.958	Mlig455_003273 {REF} {Length: 619} {RNA1509_23064} {RNA1310_9108} {RNA815_5569} Mlig455_014182 {REF} {Length: 848} {RNA1509_23064} {RNA1310_9108} {RNA815_5569} Mlig455_037567 {REF} {Length: 733} {RNA1509_23064} {RNA1310_9108} {RNA815_5569} Mlig455_046981 {REF} {Length: 755} {RNA1509_23064} {RNA1310_9108} {RNA815_5569}
4.	MligTC455_14399	27	0.56	Mlig455_058566	Neo: - Age: -		0.955	-	-	-	-	-	0.955	Mlig455_058566 {REF} {Length: 603} {NoTransDecoderORF}
5.	MligTC455_30699	96	2.01	Mlig455_061110	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.897		0.95	-	-	-	-	-	0.950	Mlig455_061110 {REF} {Length: 3253} {Pfam: Fibronectin type III domain [PF00041.23, score=79.9]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=19.3]} {RNA1509_43854} {RNA1310_20229.1} {RNA815_718.1}
6.	MligTC455_33908	38	0.79	Mlig455_030655	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_030655 {REF} {Length: 2316} {Dmel: FBgn0051626, CG31626, [Score=54.7, Expect=4e-08]} {RNA1310_49085}
7.	MligTC455_40566	108	2.26	Mlig455_024123	Neo: - Age: -	SMOX	0.95	-	-	-	-	-	0.950	Mlig455_024123 {REF} {Length: 3226} {TRANSSPLICED} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=170.6]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=52.5]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=22.6]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=21.7]; FAD dependent oxidoreductase [PF01266.26, score=21.2]; FAD binding domain [PF00890.26, score=18.4]} {Human: ENSG00000088826, SMOX, spermine oxidase, [Score=121, Expect=3e-29]} {Mouse: ENSMUSG00000027333, Smox, spermine oxidase, [Score=120, Expect=5e-29]} {Dmel: FBgn0035943, CG5653, [Score=133, Expect=6e-34]} {Celegans: WBGene00016061, hpo-15, [Score=122, Expect=7e-30]} {Smed: dd_Smed_v6_20536_0_1, dd_Smed_v6_20536_0_1, [Score=53.9, Expect=9e-08]} {RNA1509_44166, RNA1509_54827} {RNA1310_14670.1, RNA1509_54827} {RNA1509_54827, RNA815_11013}

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