Data search
Results for MligTC455_45688
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_45688 | 345 | 7.18 | Mlig455_070620 | Neo: - Age: Down-Up-Down |
Mlig455_070620 {REF} {Length: 1587} {RNA1509_41512} {RNA1310_17138, RNA1509_41512} {RNA1509_41512, RNA815_14470} |
Cumulative graph for MligTC455_45688
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.218 | 3.286 | 0.03454 | 0.46460 | |
| RegionR2 | 1.553 | 3.286 | 0.07683 | 0.33882 | |
| RegionR3 | 1.174 | 3.286 | 0.15097 | 0.65858 | |
| RegionR4 | 0.92 | 3.286 | 0.29973 | 0.61246 | |
| RegionR5 | 0.968 | 3.286 | 0.23977 | 0.55111 | |
| RegionR6 | 1.63 | 3.286 | 0.03227 | 0.33408 | |
| RegionR7 | 0.09 | 3.286 | 0.82588 | 1.00000 | |
| RegionR8 | 0.883 | 3.286 | 0.44728 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.23 | 3.286 | 0.99998 | 1.00000 | |
| RegenerationR2 | -0.566 | 3.286 | 0.25741 | 0.70395 | |
| RegenerationR3 | -0.081 | 3.286 | 0.88094 | 1.00000 | |
| RegenerationR4 | -0.21 | 3.286 | 0.70383 | 0.95539 | |
| RegenerationR5 | -0.715 | 3.286 | 0.18835 | 0.61834 | |
| RegenerationR6 | -0.124 | 3.286 | 0.81777 | 0.98593 | |
| RegenerationBL | -1.571 | 3.286 | 0.06181 | 0.28883 | |
| RegenerationTP | 0.653 | 3.286 | 0.38170 | 0.81673 |
Genes with expression patterns similar to MligTC455_45688
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_45688 | 345 | 7.18 | Mlig455_070620 | Neo: - Age: Down-Up-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_070620 {REF} {Length: 1587} {RNA1509_41512} {RNA1310_17138, RNA1509_41512} {RNA1509_41512, RNA815_14470} | |
| 2. | MligTC455_32300 | 256 | 5.34 | Mlig455_036534 | Neo: - Age: - Region-enriched R2: 2.018/0.04615 |
1.773 | - | - | 0.809 | 0.964 | - | - | Mlig455_036534 {REF} {Length: 3738} {TRANSSPLICED} {Smed: dd_Smed_v6_5953_0_1, dd_Smed_v6_5953_0_1, [Score=88.2, Expect=4e-20]} {RNA1509_24553, RNA1509_27954} {RNA1310_25241.1, RNA1509_24553, RNA1509_27954} {RNA1509_24553, RNA1509_27954, RNA815_10356} | |
| 3. | MligTC455_22453 | 308 | 6.42 | Mlig455_002760, Mlig455_063360 | Neo: - Age: - Region-enriched R7: 1.998/0.00091 |
RHBDL2 | 0.965 | - | - | - | 0.965 | - | - | Mlig455_002760 {REF} {Length: 340} {NoTransDecoderORF} {RNA1310_79323} {RNA815_51519} Mlig455_063360 {REF} {Length: 4019} {Pfam: Rhomboid family [PF01694.24, score=76.7]} {Human: ENSG00000158315, RHBDL2, rhomboid like 2, [Score=111, Expect=1e-26]} {Mouse: ENSMUSG00000043333, Rhbdl2, rhomboid like 2, [Score=117, Expect=8e-29]} {Dmel: FBgn0020248, stet, stem cell tumor, [Score=128, Expect=1e-31]} {Celegans: WBGene00004400, rom-1, Rhomboid-related protein 1, [Score=96.3, Expect=2e-21]} {Smed: dd_Smed_v6_13835_0_1, dd_Smed_v6_13835_0_1, [Score=207, Expect=4e-61]} {RNA1509_50956} {RNA1310_32207} {RNA815_21281} |
| 4. | MligTC455_19318 | 990 | 20.62 | Mlig455_010814, Mlig455_033227 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 2.132/0.00000 |
0.963 | - | - | 0.963 | - | - | - | Mlig455_010814 {REF} {Length: 1904} {TRANSSPLICED} {Pfam: piRNA pathway germ-plasm component [PF13017.8, score=55.0]} {RNA1509_35796} {RNA1310_15021} {RNA815_14322} Mlig455_033227 {REF} {Length: 1899} {TRANSSPLICED} {Pfam: piRNA pathway germ-plasm component [PF13017.8, score=54.2]} {RNA1509_17101, RNA1509_35796, RNA1509_45978} {RNA1310_15021, RNA1509_17101, RNA1509_35796, RNA1509_45978} {RNA1509_17101, RNA1509_35796, RNA1509_45978, RNA815_14322} |
|
| 5. | MligTC455_43100 | 1448 | 30.16 | Mlig455_021666 | Neo: - Age: logFC(26M/2M)=0.660 |
STK38L | 0.962 | - | - | - | 0.962 | - | - | Mlig455_021666 {REF} {Length: 3186} {Pfam: Protein kinase domain [PF00069.27, score=212.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=104.5]; ABC1 atypical kinase-like domain [PF03109.18, score=29.4]; Protein kinase C terminal domain [PF00433.26, score=23.9]; Kinase-like [PF14531.8, score=18.8]} {Human: ENSG00000211455, STK38L, serine/threonine kinase 38 like, [RH, Score=657, Expect=0.0]; ENSG00000112079, STK38, serine/threonine kinase 38, [RH, Score=648, Expect=0.0]} {Mouse: ENSMUSG00000001630, Stk38l, serine/threonine kinase 38 like, [RH, Score=665, Expect=0.0]; ENSMUSG00000024006, Stk38, serine/threonine kinase 38, [RH, Score=643, Expect=0.0]} {Dmel: FBgn0003744, trc, tricornered, [RH, Score=631, Expect=0.0]} {Celegans: WBGene00004727, sax-1, Serine/threonine-protein kinase sax-1, [RH, Score=584, Expect=0.0]} {Smed: dd_Smed_v6_6462_0_1, dd_Smed_v6_6462_0_1, [RH, Score=643, Expect=0.0]} {RNA1509_17327} {RNA1310_6212} {RNA815_1849.1} |
| 6. | MligTC455_48594 | 940 | 19.57 | Mlig455_017682 | Neo: - Age: - Region-enriched R2: 2.296/0.00015 Regeneration-downregulated BL: -7.035 Regeneration-depleted BL: -7.035 |
LIMA1 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_017682 {REF} {Length: 2023} {Pfam: LIM domain [PF00412.24, score=52.8]} {Human: ENSG00000050405, LIMA1, LIM domain and actin binding 1, [Score=73.9, Expect=1e-16]} {Mouse: ENSMUSG00000023022, Lima1, LIM domain and actin binding 1, [Score=72.0, Expect=3e-16]; ENSMUSG00000030470, Csrp3, cysteine and glycine-rich protein 3, [Score=69.7, Expect=4e-16]} {Dmel: FBgn0259209, Mlp60A, Muscle LIM protein at 60A, [Score=60.1, Expect=1e-13]} {Celegans: WBGene00003375, mlp-1, MLP/CRP family (Muscle LIM Protein/Cysteine-rich Protein), [Score=68.6, Expect=9e-17]} {Smed: dd_Smed_v6_537_0_1, dd_Smed_v6_537_0_1, [RH, Score=110, Expect=6e-34]} {RNA1509_13529, RNA1509_3532} {RNA1310_18801.1, RNA1509_13529, RNA1509_3532} {RNA1509_13529, RNA1509_3532, RNA815_9444.1} |
| 7. | MligTC455_26637 | 2883 | 60.06 | Mlig455_005548 | Neo: - Age: Up-Up-Down Region-enriched R7: 1.543/0.00000 Regeneration-downregulated BL: -1.282 Regeneration-depleted BL: -1.282 |
PTPN23 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_005548 {REF} {Length: 2321} {Pfam: BRO1-like domain [PF03097.20, score=309.5]; ALIX V-shaped domain binding to HIV [PF13949.8, score=20.3]} {Human: ENSG00000076201, PTPN23, protein tyrosine phosphatase, non-receptor type 23, [Score=316, Expect=6e-94]} {Mouse: ENSMUSG00000036057, Ptpn23, protein tyrosine phosphatase, non-receptor type 23, [Score=314, Expect=2e-93]} {Dmel: FBgn0036448, mop, myopic, [Score=280, Expect=1e-81]} {Celegans: WBGene00001215, ego-2, Enhancer of Glp-One (Glp-1); Enhancer of glp-1, [Score=169, Expect=4e-44]} {Smed: dd_Smed_v6_3351_0_2, dd_Smed_v6_3351_0_2, [Score=325, Expect=2e-97]} {RNA1509_6410} {RNA1310_2882.1} {RNA815_3253.1} |
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