Data search
Results for MligTC455_45707
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_45707 | 345 | 7.19 | Mlig455_070683 | Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 3.146/0.00000 |
Mlig455_070683 {REF} {Length: 619} {TRANSSPLICED} {RNA1509_31345} {RNA1310_61221} {RNA815_33505} |
Cumulative graph for MligTC455_45707
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.321 | 3.433 | 0.11028 | 0.69057 | |
| RegionR2 | 1.225 | 3.433 | 0.19165 | 0.54770 | |
| RegionR3 | 0.884 | 3.433 | 0.31516 | 0.85445 | |
| RegionR4 | 1.221 | 3.433 | 0.15859 | 0.41465 | |
| RegionR5 | 3.146 | 3.433 | 0.00000 | 0.00000 | |
| RegionR6 | 1.755 | 3.433 | 0.01443 | 0.20946 | |
| RegionR7 | -1.89 | 3.433 | 0.99873 | 1.00000 | |
| RegionR8 | -0.02 | 3.433 | 0.86508 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.188 | 3.433 | 0.99998 | 1.00000 | |
| RegenerationR2 | 0.173 | 3.433 | 0.70524 | 0.95820 | |
| RegenerationR3 | 0.969 | 3.433 | 0.06455 | 0.42824 | |
| RegenerationR4 | 0.766 | 3.433 | 0.15036 | 0.57847 | |
| RegenerationR5 | -0.431 | 3.433 | 0.29377 | 0.72165 | |
| RegenerationR6 | 0.136 | 3.433 | 0.79074 | 0.97287 | |
| RegenerationBL | 0.506 | 3.433 | 0.57048 | 0.92391 | |
| RegenerationTP | 1.841 | 3.433 | 0.05224 | 0.37423 |
Genes with expression patterns similar to MligTC455_45707
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_45707 | 345 | 7.19 | Mlig455_070683 | Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 3.146/0.00000 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_070683 {REF} {Length: 619} {TRANSSPLICED} {RNA1509_31345} {RNA1310_61221} {RNA815_33505} | |
| 2. | MligTC455_44615 | 349 | 7.28 | Mlig455_013647 | Neo: - Age: - Region-enriched R5: 1.203/0.00879 |
ERG28 | 2.736 | - | 0.960 | - | - | 0.874 | 0.902 | Mlig455_013647 {REF} {Length: 2311} {TRANSSPLICED} {Pfam: Erg28 like protein [PF03694.15, score=81.5]} {Human: ENSG00000133935, ERG28, ergosterol biosynthesis 28 homolog, [RH, Score=78.6, Expect=1e-18]} {Mouse: ENSMUSG00000021252, Erg28, ergosterol biosynthesis 28, [RH, Score=77.8, Expect=2e-18]} {RNA1509_32376} {RNA1310_30496, RNA1509_32376} {RNA1509_32376, RNA815_19683} |
| 3. | MligTC455_39285 | 503 | 10.48 | Mlig455_026954 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 2.273/0.00002 |
2.568 | - | 0.911 | 0.704 | - | - | 0.953 | Mlig455_026954 {REF} {Length: 2234} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25432} {RNA1310_22232} {RNA815_10193} | |
| 4. | MligTC455_24013 | 3726 | 77.62 | Mlig455_000552 | Neo: Irradiation Age: - Region-enriched R5: 4.033/0.00002 |
2.46 | 0.758 | 0.952 | 0.750 | - | - | - | Mlig455_000552 {REF} {Length: 1600} {RNA1509_1142, RNA1509_2907, RNA1509_4806} {RNA1310_24726, RNA1509_1142, RNA1509_2907, RNA1509_4806} {RNA1509_1142, RNA1509_2907, RNA1509_4806, RNA815_10581} | |
| 5. | MligTC455_24014 | 3741 | 77.94 | Mlig455_030350 | Neo: Irradiation Age: logFC(26M/2M)=0.425 Region-enriched R5: 4.065/0.00000 |
2.458 | 0.757 | 0.951 | 0.750 | - | - | - | Mlig455_030350 {REF} {Length: 1483} {RNA1509_14316, RNA1509_2907, RNA1509_31731, RNA1509_47764} {RNA1310_24726, RNA1509_14316, RNA1509_31731, RNA1509_47764} {RNA1509_14316, RNA1509_31731, RNA1509_47764, RNA815_10581} | |
| 6. | MligTC455_42529 | 1053 | 21.93 | Mlig455_050818 | Neo: Irradiation Age: logFC(26M/2M)=0.320 Region-specific R5: 4.061 Region-enriched R5: 3.801/0.00000 |
1.776 | - | 0.973 | - | - | - | 0.803 | Mlig455_050818 {REF} {Length: 1422} {TRANSSPLICED} {RNA1509_10427, RNA1509_20462, RNA1509_24340} {RNA1310_21686, RNA1509_10427, RNA1509_20462, RNA1509_24340} {RNA1509_10427, RNA1509_20462, RNA1509_24340, RNA815_8467.1} | |
| 7. | MligTC455_42528 | 974 | 20.3 | Mlig455_043278 | Neo: - Age: - Region-specific R5: 4.050 Region-enriched R5: 3.762/0.00000 |
1.769 | - | 0.969 | - | - | - | 0.800 | Mlig455_043278 {REF} {Length: 1530} {TRANSSPLICED} {RNA1509_24340, RNA1509_36228} {RNA1310_19693, RNA1509_36228} {RNA1509_36228, RNA815_8467.1} | |
| 8. | MligTC455_46127 | 479 | 9.97 | Mlig455_003657 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.680 Region-enriched R5: 1.796/0.00007 |
N6AMT1 | 1.727 | - | 0.950 | - | - | - | 0.777 | Mlig455_003657 {REF} {Length: 783} {Human: ENSG00000156239, N6AMT1, N-6 adenine-specific DNA methyltransferase 1, [RH, Score=132, Expect=7e-38]} {Mouse: ENSMUSG00000044442, N6amt1, N-6 adenine-specific DNA methyltransferase 1 (putative), [RH, Score=134, Expect=9e-39]} {Dmel: FBgn0031454, CG9960, [RH, Score=137, Expect=4e-40]} {Celegans: WBGene00016341, mtq-2, MethylTransferase modifying glutamine (Q), [RH, Score=98.2, Expect=4e-25]} {Smed: dd_Smed_v6_17664_0_1, dd_Smed_v6_17664_0_1, [RH, Score=65.1, Expect=2e-13]} {RNA1509_18833} {RNA1310_35194.1} {RNA815_23131} |
| 9. | MligTC455_24048 | 3092 | 64.42 | Mlig455_008833, Mlig455_008935 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.252 |
HYPK | 1.684 | - | - | - | 0.717 | - | 0.967 | Mlig455_008833 {REF} {Length: 1083} {TRANSSPLICED} {Pfam: HYPK UBA domain [PF19026.2, score=51.9]} {Human: ENSG00000242028, HYPK, huntingtin interacting protein K, [RH, Score=64.3, Expect=2e-13]} {Mouse: ENSMUSG00000027245, Hypk, huntingtin interacting protein K, [RH, Score=64.3, Expect=1e-13]} {Dmel: FBgn0038196, CG9922, [RH, Score=52.4, Expect=3e-09]} {RNA1509_10390, RNA1509_54479} {RNA1310_31866, RNA1509_10390, RNA1509_54479} {RNA1509_10390, RNA1509_54479, RNA815_38606} Mlig455_008935 {REF} {Length: 1083} {TRANSSPLICED} {Pfam: HYPK UBA domain [PF19026.2, score=51.9]} {Human: ENSG00000242028, HYPK, huntingtin interacting protein K, [RH, Score=64.3, Expect=2e-13]} {Mouse: ENSMUSG00000027245, Hypk, huntingtin interacting protein K, [RH, Score=64.3, Expect=1e-13]} {Dmel: FBgn0038196, CG9922, [RH, Score=52.4, Expect=3e-09]} {RNA1509_10375, RNA1509_10390} {RNA1310_31866, RNA1509_10375} {RNA1509_10375, RNA815_38606} |
| 10. | MligTC455_43684 | 829 | 17.28 | Mlig455_014646 | Neo: - Age: - Region-enriched R4: 1.008/0.04892 |
1.665 | 0.713 | - | - | - | - | 0.952 | Mlig455_014646 {REF} {Length: 1639} {TRANSSPLICED} {Dmel: FBgn0039265, CG11790, [RH, Score=76.3, Expect=1e-15]} {RNA1509_33322} {RNA1310_28680.1} {RNA815_13897} | |
| 11. | MligTC455_22333 | 4164 | 86.76 | Mlig455_036616 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.232 Region-specific R5: 1.736 Region-enriched R5: 1.476/0.00000 |
PRMT1 | 0.964 | - | - | - | - | - | 0.964 | Mlig455_036616 {REF} {Length: 1626} {TRANSSPLICED} {Pfam: Ribosomal protein L11 methyltransferase (PrmA) [PF06325.15, score=45.4]; Methyltransferase domain [PF13649.8, score=44.6]; Methyltransferase domain [PF08241.14, score=34.0]; Methyltransferase domain [PF13847.8, score=29.4]; Methyltransferase small domain [PF05175.16, score=25.1]; Methyltransferase domain [PF12847.9, score=24.6]; Methyltransferase domain [PF13489.8, score=22.9]; Protein of unknown function (DUF1698) [PF08003.13, score=22.2]; Mycolic acid cyclopropane synthetase [PF02353.22, score=21.6]} {Human: ENSG00000126457, PRMT1, protein arginine methyltransferase 1, [RH, Score=495, Expect=3e-176]; ENSG00000111218, PRMT8, protein arginine methyltransferase 8, [RH, Score=483, Expect=3e-171]} {Mouse: ENSMUSG00000109324, Prmt1, protein arginine N-methyltransferase 1, [RH, Score=493, Expect=1e-175]; ENSMUSG00000030350, Prmt8, protein arginine N-methyltransferase 8, [RH, Score=483, Expect=2e-171]} {Dmel: FBgn0037834, Art1, Arginine methyltransferase 1, [RH, Score=502, Expect=2e-179]} {Celegans: WBGene00013766, prmt-1, Protein arginine N-methyltransferase 1, [RH, Score=444, Expect=8e-157]} {Smed: dd_Smed_v6_1755_0_1, dd_Smed_v6_1755_0_1, [RH, Score=512, Expect=0.0]} {RNA1509_635} {RNA1310_17985, RNA1509_635} {RNA1509_635, RNA815_7554} |
| 12. | MligTC455_41203 | 252 | 5.25 | Mlig455_062330 | Neo: - Age: - |
ARFIP1 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_062330 {REF} {Length: 3799} {TRANSSPLICED} {Pfam: Arfaptin-like domain [PF06456.15, score=165.2]; BAR domain of APPL family [PF16746.7, score=21.0]} {Human: ENSG00000164144, ARFIP1, ADP ribosylation factor interacting protein 1, [Score=218, Expect=4e-68]; ENSG00000132254, ARFIP2, ADP ribosylation factor interacting protein 2, [Score=218, Expect=1e-68]} {Mouse: ENSMUSG00000074513, Arfip1, ADP-ribosylation factor interacting protein 1, [Score=219, Expect=3e-68]; ENSMUSG00000030881, Arfip2, ADP-ribosylation factor interacting protein 2, [Score=217, Expect=4e-68]; ENSMUSG00000102805, Gm37240, predicted gene, 37240, [Score=216, Expect=6e-69]} {Dmel: FBgn0037884, Arfip, Arfaptin, [Score=216, Expect=8e-68]} {Celegans: WBGene00010040, F54C8.7, [Score=119, Expect=4e-31]} {Smed: dd_Smed_v6_5732_0_1, dd_Smed_v6_5732_0_1, [Score=203, Expect=2e-63]} {RNA1509_22107, RNA1509_58588} {RNA1310_24267, RNA1509_58588} {RNA1509_58588, RNA815_18488} |
| 13. | MligTC455_23651 | 136 | 2.83 | Mlig455_007003 | Neo: Int S/G2/M Age: - |
0.959 | - | 0.959 | - | - | - | - | Mlig455_007003 {REF} {Length: 1714} {Pfam: Cell cycle regulatory protein [PF11357.10, score=25.1]} {RNA1509_12112} {RNA1310_23429} {RNA815_41785} | |
| 14. | MligTC455_00881 | 242 | 5.04 | Mlig455_017710, Mlig455_017711, Mlig455_017762, Mlig455_017764 | Neo: - Age: - |
0.957 | - | - | - | - | - | 0.957 | Mlig455_017710 {REF} {Length: 638} {Pfam: Domain of unknown function (DUF4732) [PF15876.7, score=20.5]} {Smed: dd_Smed_v6_28272_0_3, dd_Smed_v6_28272_0_3, [RH, Score=83.6, Expect=7e-20]} {RNA1310_148244} Mlig455_017711 {REF} {Length: 3116} {RNA1509_44311} {RNA1310_10948.1, RNA1509_44311} {RNA1509_44311, RNA815_32696} Mlig455_017762 {REF} {Length: 638} {Pfam: Domain of unknown function (DUF4732) [PF15876.7, score=20.5]} {Smed: dd_Smed_v6_28272_0_3, dd_Smed_v6_28272_0_3, [RH, Score=83.6, Expect=7e-20]} {RNA1310_148244} Mlig455_017764 {REF} {Length: 3473} {RNA1509_44311} {RNA1310_10948.1} {RNA815_32696} |
|
| 15. | MligTC455_34018 | 458 | 9.54 | Mlig455_008955 | Neo: - Age: - Region-enriched R5: 1.990/0.00877 |
FAM126B | 0.955 | - | - | - | - | - | 0.955 | Mlig455_008955 {REF} {Length: 2791} {TRANSSPLICED} {Pfam: Hyccin [PF09790.11, score=160.1]} {Human: ENSG00000155744, FAM126B, family with sequence similarity 126 member B, [RH, Score=107, Expect=5e-24]} {Mouse: ENSMUSG00000038174, Fam126b, family with sequence similarity 126, member B, [RH, Score=108, Expect=1e-24]} {Dmel: FBgn0034269, CG6406, [Score=98.6, Expect=1e-21]} {Celegans: WBGene00017037, D1069.3, [RH, Score=59.7, Expect=3e-09]} {Smed: dd_Smed_v6_9629_0_1, dd_Smed_v6_9629_0_1, [RH, Score=55.1, Expect=7e-08]} {RNA1509_16929} {RNA1310_6338, RNA1509_16929} {RNA1509_16929, RNA815_12332} |
| 16. | MligTC455_45143 | 671 | 13.99 | Mlig455_006437 | Neo: - Age: - |
ALG2 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_006437 {REF} {Length: 3112} {TRANSSPLICED} {Pfam: Glycosyl transferases group 1 [PF00534.22, score=124.8]; Glycosyl transferases group 1 [PF13692.8, score=65.0]; Glycosyltransferase Family 4 [PF13439.8, score=34.5]; Glycosyl transferases group 1 [PF13524.8, score=25.9]; Glycosyl transferase 4-like domain [PF13579.8, score=25.9]} {Human: ENSG00000119523, ALG2, ALG2, alpha-1,3/1,6-mannosyltransferase, [RH, Score=338, Expect=3e-113]} {Mouse: ENSMUSG00000039740, Alg2, asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase), [RH, Score=349, Expect=8e-118]} {Dmel: FBgn0035401, CG1291, [RH, Score=327, Expect=8e-109]} {Celegans: WBGene00017282, algn-2, Asparagine Linked Glycosylation (ALG) homolog, Nematode, [RH, Score=307, Expect=9e-102]} {Smed: dd_Smed_v6_6228_0_1, dd_Smed_v6_6228_0_1, [RH, Score=333, Expect=7e-112]} {RNA1509_10072} {RNA1310_20122} {RNA815_8316} |
| 17. | MligTC455_49193 | 386 | 8.05 | Mlig455_022529 | Neo: - Age: - Region-enriched R4: 1.228/0.03615 |
OTUD3 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_022529 {REF} {Length: 2208} {Pfam: OTU-like cysteine protease [PF02338.21, score=44.2]; Peptidase C65 Otubain [PF10275.11, score=24.4]} {Human: ENSG00000169914, OTUD3, OTU deubiquitinase 3, [Score=190, Expect=4e-57]} {Mouse: ENSMUSG00000041161, Otud3, OTU domain containing 3, [Score=185, Expect=2e-55]} {Smed: dd_Smed_v6_7154_0_1, dd_Smed_v6_7154_0_1, [Score=146, Expect=2e-42]} {RNA1509_18442} {RNA1310_8277} {RNA815_6103} |
Berezikov Lab - 2020-2021 © ERIBA