TomoSeq data search

Data search

Results for MligTC455_45745

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_45745	1086	22.62	Mlig455_001938	Neo: Irradiation Age: - Region-enriched R5: 1.353/0.00014 Region-enriched R4: 1.226/0.02349		Mlig455_001938 {REF} {Length: 4711} {RNA1509_17548} {RNA1310_24469} {RNA815_9732}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_45745

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.048	4.776	0.30659	0.95548
RegionR2	-0.818	4.776	0.05436	0.27930
RegionR3	0.516	4.776	0.11230	0.58342
RegionR4	1.226	4.776	0.00285	0.02349
RegionR5	1.353	4.776	0.00000	0.00014
RegionR6	0.596	4.776	0.07082	0.49553
RegionR7	-0.456	4.776	0.28440	0.91774
RegionR8	-1.368	4.776	0.01699	0.25360

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.751	4.776	0.66539	1.00000
RegenerationR2	-0.086	4.776	0.81339	0.99389
RegenerationR3	-0.63	4.776	0.09685	0.49879
RegenerationR4	-0.515	4.776	0.19172	0.63624
RegenerationR5	-0.467	4.776	0.17635	0.60585
RegenerationR6	-1.027	4.776	0.01026	0.12505
RegenerationBL	-0.423	4.776	0.39059	0.75899
RegenerationTP	0.431	4.776	0.39475	0.82555

Genes with expression patterns similar to MligTC455_45745

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_45745	1086	22.62	Mlig455_001938	Neo: Irradiation Age: - Region-enriched R5: 1.353/0.00014 Region-enriched R4: 1.226/0.02349		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_001938 {REF} {Length: 4711} {RNA1509_17548} {RNA1310_24469} {RNA815_9732}
2.	MligTC455_36438	1716	35.76	Mlig455_048901	Neo: - Age: Down-Down-Up	PPP1R16B	0.955	-	-	-	-	0.955	-	Mlig455_048901 {REF} {Length: 3018} {TRANSSPLICED} {Pfam: NF-kappa-B-activating protein C-terminal domain [PF06047.13, score=152.8]; Ankyrin repeats (3 copies) [PF12796.9, score=98.2]; Ankyrin repeats (many copies) [PF13637.8, score=92.9]; Ankyrin repeats (many copies) [PF13857.8, score=75.5]; Ankyrin repeat [PF13606.8, score=66.5]; Ankyrin repeat [PF00023.32, score=60.0]} {Human: ENSG00000101445, PPP1R16B, protein phosphatase 1 regulatory subunit 16B, [Score=312, Expect=2e-95]} {Mouse: ENSMUSG00000033819, Ppp1r16a, protein phosphatase 1, regulatory subunit 16A, [Score=312, Expect=4e-96]; ENSMUSG00000037754, Ppp1r16b, protein phosphatase 1, regulatory subunit 16B, [Score=310, Expect=6e-95]} {Dmel: FBgn0036801, MYPT-75D, [RH, Score=341, Expect=1e-104]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [RH, Score=278, Expect=4e-84]} {Smed: dd_Smed_v6_5941_0_1, dd_Smed_v6_5941_0_1, [RH, Score=365, Expect=6e-116]} {RNA1509_5816} {RNA1310_19872, RNA1509_5816} {RNA1509_5816, RNA815_8638}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_45745

1086

22.62

Mlig455_001938

Neo: Irradiation

Age: -

Region-enriched R5: 1.353/0.00014
Region-enriched R4: 1.226/0.02349

1.000

Mlig455_001938 {REF} {Length: 4711} {RNA1509_17548} {RNA1310_24469} {RNA815_9732}

MligTC455_36438

1716

35.76

Mlig455_048901

Neo: -

Age: Down-Down-Up

PPP1R16B

0.955

Mlig455_048901 {REF} {Length: 3018} {TRANSSPLICED} {Pfam: NF-kappa-B-activating protein C-terminal domain [PF06047.13, score=152.8]; Ankyrin repeats (3 copies) [PF12796.9, score=98.2]; Ankyrin repeats (many copies) [PF13637.8, score=92.9]; Ankyrin repeats (many copies) [PF13857.8, score=75.5]; Ankyrin repeat [PF13606.8, score=66.5]; Ankyrin repeat [PF00023.32, score=60.0]} {Human: ENSG00000101445, PPP1R16B, protein phosphatase 1 regulatory subunit 16B, [Score=312, Expect=2e-95]} {Mouse: ENSMUSG00000033819, Ppp1r16a, protein phosphatase 1, regulatory subunit 16A, [Score=312, Expect=4e-96]; ENSMUSG00000037754, Ppp1r16b, protein phosphatase 1, regulatory subunit 16B, [Score=310, Expect=6e-95]} {Dmel: FBgn0036801, MYPT-75D, [RH, Score=341, Expect=1e-104]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [RH, Score=278, Expect=4e-84]} {Smed: dd_Smed_v6_5941_0_1, dd_Smed_v6_5941_0_1, [RH, Score=365, Expect=6e-116]} {RNA1509_5816} {RNA1310_19872, RNA1509_5816} {RNA1509_5816, RNA815_8638}