TomoSeq data search

Data search

Results for MligTC455_45783

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_45783

1131

23.57

Mlig455_013737

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.301

THUMPD3

Mlig455_013737 {REF} {Length: 1524} {TRANSSPLICED} {Pfam: Putative RNA methylase family UPF0020 [PF01170.20, score=90.2]; THUMP domain [PF02926.19, score=42.2]} {Human: ENSG00000134077, THUMPD3, THUMP domain containing 3, [RH, Score=241, Expect=1e-73]} {Mouse: ENSMUSG00000030264, Thumpd3, THUMP domain containing 3, [RH, Score=239, Expect=8e-73]} {Celegans: WBGene00010846, M04B2.2, [RH, Score=157, Expect=2e-43]} {RNA1509_11788} {RNA1310_21042, RNA1509_11788} {RNA1509_11788, RNA815_9114}

Cumulative graph for MligTC455_45783

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.526	4.799	0.51808	1.00000
RegionR2	-0.198	4.799	0.60321	0.95325
RegionR3	-0.039	4.799	0.90088	1.00000
RegionR4	0.155	4.799	0.62625	0.93530
RegionR5	0.546	4.799	0.03957	0.15820
RegionR6	0.069	4.799	0.82420	1.00000
RegionR7	0.163	4.799	0.68372	1.00000
RegionR8	-0.169	4.799	0.75952	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.053	4.799	0.40844	1.00000
RegenerationR2	0.242	4.799	0.44229	0.84114
RegenerationR3	0.228	4.799	0.49615	0.85641
RegenerationR4	0.002	4.799	0.99634	1.00000
RegenerationR5	-0.021	4.799	0.94257	1.00000
RegenerationR6	0.302	4.799	0.36399	0.70786
RegenerationBL	-0.099	4.799	0.81032	1.00000
RegenerationTP	0.337	4.799	0.44312	0.86246

Genes with expression patterns similar to MligTC455_45783

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_45783	1131	23.57	Mlig455_013737	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.301	THUMPD3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_013737 {REF} {Length: 1524} {TRANSSPLICED} {Pfam: Putative RNA methylase family UPF0020 [PF01170.20, score=90.2]; THUMP domain [PF02926.19, score=42.2]} {Human: ENSG00000134077, THUMPD3, THUMP domain containing 3, [RH, Score=241, Expect=1e-73]} {Mouse: ENSMUSG00000030264, Thumpd3, THUMP domain containing 3, [RH, Score=239, Expect=8e-73]} {Celegans: WBGene00010846, M04B2.2, [RH, Score=157, Expect=2e-43]} {RNA1509_11788} {RNA1310_21042, RNA1509_11788} {RNA1509_11788, RNA815_9114}
2.	MligTC455_18786	1467	30.57	Mlig455_065429, Mlig455_067902	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.768	MRPS28	1.741	-	-	-	-	0.781	0.960	Mlig455_065429 {REF} {Length: 925} {TRANSSPLICED} {RNA1509_49496} {RNA1310_29693} {RNA815_14031} Mlig455_067902 {REF} {Length: 1210} {TRANSSPLICED} {Pfam: Mitochondrial ribosomal protein MRP-S35 [PF10246.11, score=128.3]} {Human: ENSG00000147586, MRPS28, mitochondrial ribosomal protein S28, [RH, Score=108, Expect=7e-28]} {Mouse: ENSMUSG00000040269, Mrps28, mitochondrial ribosomal protein S28, [RH, Score=113, Expect=8e-30]} {Dmel: FBgn0034361, mRpS28, mitochondrial ribosomal protein S28, [RH, Score=108, Expect=4e-28]} {Celegans: WBGene00012830, mrps-28, Mitochondrial Ribosomal Protein, Small, [RH, Score=114, Expect=1e-30]} {Smed: dd_Smed_v6_4981_0_1, dd_Smed_v6_4981_0_1, [RH, Score=71.6, Expect=1e-14]} {RNA1509_26497} {RNA1310_29693} {RNA815_14031}
3.	MligTC455_44003	3464	72.17	Mlig455_010964	Neo: - Age: -	SERF2	0.953	-	-	-	0.953	-	-	Mlig455_010964 {REF} {Length: 1259} {TRANSSPLICED} {Pfam: 4F5 protein related disordered region [PF04419.16, score=22.6]} {Human: ENSG00000140264, SERF2, small EDRK-rich factor 2, [RH, Score=39.7, Expect=9e-06]} {Mouse: ENSMUSG00000074884, Serf2, small EDRK-rich factor 2, [RH, Score=39.7, Expect=6e-06]} {Dmel: FBgn0038421, CG17931, [RH, Score=42.0, Expect=5e-07]} {Celegans: WBGene00021348, moag-4, MOdifier of protein AGgregation, [RH, Score=47.8, Expect=4e-09]} {Smed: dd_Smed_v6_2101_0_1, dd_Smed_v6_2101_0_1, [RH, Score=46.6, Expect=6e-09]} {RNA1509_1931, RNA1509_54465} {RNA1310_21.1, RNA1509_1931, RNA1509_54465} {RNA1509_1931, RNA1509_54465, RNA815_11101.2}
4.	MligTC455_47358	1800	37.49	Mlig455_003340	Neo: - Age: Down-Down-Up, logFC(26M/2M)=2.098	COA5	0.951	-	-	-	-	0.951	-	Mlig455_003340 {REF} {Length: 1303} {TRANSSPLICED} {Pfam: Cytochrome c oxidase assembly protein PET191 [PF10203.11, score=79.2]} {Human: ENSG00000183513, COA5, cytochrome c oxidase assembly factor 5, [RH, Score=60.1, Expect=4e-13]} {Dmel: FBgn0040751, CG13018, [RH, Score=63.2, Expect=2e-14]} {Smed: dd_Smed_v6_2639_0_1, dd_Smed_v6_2639_0_1, [RH, Score=71.6, Expect=5e-18]} {RNA1509_3262} {RNA1310_26754, RNA1509_3262} {RNA1509_3262, RNA815_11640}
5.	MligTC455_47539	1074	22.37	Mlig455_026891	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.503	PRPF3	0.95	-	-	-	-	-	0.950	Mlig455_026891 {REF} {Length: 2032} {TRANSSPLICED} {Pfam: pre-mRNA processing factor 3 (PRP3) [PF08572.12, score=218.0]; Protein of unknown function (DUF1115) [PF06544.14, score=121.5]} {Human: ENSG00000117360, PRPF3, pre-mRNA processing factor 3, [RH, Score=395, Expect=4e-129]} {Mouse: ENSMUSG00000015748, Prpf3, pre-mRNA processing factor 3, [RH, Score=395, Expect=3e-129]} {Dmel: FBgn0036915, Prp3, Precursor RNA processing 3, [RH, Score=403, Expect=7e-134]} {Celegans: WBGene00010844, prp-3, Yeast PRP (Splicing factor) related, [RH, Score=316, Expect=5e-100]} {Smed: dd_Smed_v6_5417_0_1, dd_Smed_v6_5417_0_1, [RH, Score=357, Expect=2e-117]} {RNA1509_38170, RNA1509_46973, RNA1509_7892} {RNA1310_13414, RNA1509_38170, RNA1509_46973, RNA1509_7892} {RNA1509_38170, RNA1509_46973, RNA1509_7892, RNA815_4827}

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