Data search
Results for MligTC455_45786
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_45786 | 3385 | 70.51 | Mlig455_040717 | Neo: - Age: logFC(26M/2M)=0.437 Region-enriched R5: 1.079/0.01376 |
PHGDH | Mlig455_040717 {REF} {Length: 2255} {Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain [PF02826.21, score=203.0]; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain [PF00389.32, score=110.1]; Acetohydroxy acid isomeroreductase, NADPH-binding domain [PF07991.14, score=21.8]; NAD binding domain of 6-phosphogluconate dehydrogenase [PF03446.17, score=19.0]} {Human: ENSG00000092621, PHGDH, phosphoglycerate dehydrogenase, [RH, Score=377, Expect=2e-125]} {Mouse: ENSMUSG00000053398, Phgdh, 3-phosphoglycerate dehydrogenase, [RH, Score=379, Expect=1e-124]} {Dmel: FBgn0032350, CG6287, [RH, Score=324, Expect=3e-106]} {Celegans: WBGene00007836, C31C9.2, [RH, Score=333, Expect=3e-110]} {Smed: dd_Smed_v6_6254_0_1, dd_Smed_v6_6254_0_1, [RH, Score=341, Expect=2e-110]} {RNA1509_31604, RNA1509_3819, RNA1509_8750} {RNA1310_12646, RNA1509_31604, RNA1509_3819, RNA1509_8750} {RNA1509_31604, RNA1509_3819, RNA1509_8750, RNA815_14150} |
Cumulative graph for MligTC455_45786
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.472 | 6.272 | 0.48967 | 1.00000 | |
| RegionR2 | 0.043 | 6.272 | 0.92330 | 1.00000 | |
| RegionR3 | 0.116 | 6.272 | 0.75853 | 1.00000 | |
| RegionR4 | -0.925 | 6.272 | 0.03175 | 0.14155 | |
| RegionR5 | 1.079 | 6.272 | 0.00146 | 0.01376 | |
| RegionR6 | 0.493 | 6.272 | 0.17800 | 0.74028 | |
| RegionR7 | 0.409 | 6.272 | 0.28452 | 0.91786 | |
| RegionR8 | -0.742 | 6.272 | 0.13907 | 0.68113 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.225 | 6.272 | 0.79988 | 1.00000 | |
| RegenerationR2 | -0.44 | 6.272 | 0.34550 | 0.77911 | |
| RegenerationR3 | -0.079 | 6.272 | 0.86707 | 1.00000 | |
| RegenerationR4 | 0.407 | 6.272 | 0.39778 | 0.81194 | |
| RegenerationR5 | -0.369 | 6.272 | 0.42421 | 0.81405 | |
| RegenerationR6 | -0.26 | 6.272 | 0.58041 | 0.85778 | |
| RegenerationBL | 0.224 | 6.272 | 0.60614 | 0.95257 | |
| RegenerationTP | -0.483 | 6.272 | 0.33627 | 0.78043 |
Genes with expression patterns similar to MligTC455_45786
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_45786 | 3385 | 70.51 | Mlig455_040717 | Neo: - Age: logFC(26M/2M)=0.437 Region-enriched R5: 1.079/0.01376 |
PHGDH | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_040717 {REF} {Length: 2255} {Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain [PF02826.21, score=203.0]; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain [PF00389.32, score=110.1]; Acetohydroxy acid isomeroreductase, NADPH-binding domain [PF07991.14, score=21.8]; NAD binding domain of 6-phosphogluconate dehydrogenase [PF03446.17, score=19.0]} {Human: ENSG00000092621, PHGDH, phosphoglycerate dehydrogenase, [RH, Score=377, Expect=2e-125]} {Mouse: ENSMUSG00000053398, Phgdh, 3-phosphoglycerate dehydrogenase, [RH, Score=379, Expect=1e-124]} {Dmel: FBgn0032350, CG6287, [RH, Score=324, Expect=3e-106]} {Celegans: WBGene00007836, C31C9.2, [RH, Score=333, Expect=3e-110]} {Smed: dd_Smed_v6_6254_0_1, dd_Smed_v6_6254_0_1, [RH, Score=341, Expect=2e-110]} {RNA1509_31604, RNA1509_3819, RNA1509_8750} {RNA1310_12646, RNA1509_31604, RNA1509_3819, RNA1509_8750} {RNA1509_31604, RNA1509_3819, RNA1509_8750, RNA815_14150} |
| 2. | MligTC455_49427 | 216 | 4.49 | Mlig455_005037 | Neo: Irradiation Age: - Region-enriched R5: 2.616/0.00000 |
2.484 | 0.810 | - | 0.722 | - | 0.952 | - | Mlig455_005037 {REF} {Length: 3393} {Pfam: C2H2-type zinc-finger domain [PF13909.8, score=45.6]; Zinc finger, C2H2 type [PF00096.28, score=24.9]; C2H2-type zinc finger [PF13894.8, score=21.4]} {Smed: dd_Smed_v6_36433_0_1, dd_Smed_v6_36433_0_1, [RH, Score=177, Expect=2e-48]} {RNA1509_19024} {RNA1310_8889} {RNA815_15557} | |
| 3. | MligTC455_24971 | 583 | 12.15 | Mlig455_012295, Mlig455_012300 | Neo: - Age: logFC(26M/2M)=0.505 Region-enriched R5: 6.665/0.00000 |
0.96 | - | - | - | - | 0.960 | - | Mlig455_012295 {REF} {Length: 1272} {RNA1509_29619} {RNA1310_1137.1} {RNA815_25795} Mlig455_012300 {REF} {Length: 664} {RNA1509_29619} {RNA1310_30104} {RNA815_25795} |
|
| 4. | MligTC455_17190 | 447 | 9.31 | Mlig455_060271 | Neo: - Age: Down-Up-Down Region-enriched R2: 2.825/0.00076 |
MCRS1 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_060271 {REF} {Length: 1926} {TRANSSPLICED} {Pfam: N-terminal region of micro-spherule protein [PF13325.8, score=129.9]; FHA domain [PF00498.28, score=22.8]} {Human: ENSG00000187778, MCRS1, microspherule protein 1, [RH, Score=206, Expect=2e-61]} {Mouse: ENSMUSG00000037570, Mcrs1, microspherule protein 1, [RH, Score=210, Expect=6e-63]} {Dmel: FBgn0263832, Rcd5, Reduction in Cnn dots 5, [RH, Score=176, Expect=2e-49]} {Celegans: WBGene00010420, mcrs-1, MCRS1 (Microtubule-binding MiCRoSpherule Protein 1) homolog, [RH, Score=88.2, Expect=8e-19]} {Smed: dd_Smed_v6_4102_0_1, dd_Smed_v6_4102_0_1, [RH, Score=146, Expect=2e-39]} {RNA1509_8483} {RNA1310_19335, RNA1509_8483} {RNA1509_8483, RNA815_6260} |
| 5. | MligTC455_02588 | 124 | 2.59 | Mlig455_027269 | Neo: - Age: - Region-enriched R8: 3.886/0.02772 |
MX2 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_027269 {REF} {Length: 3110} {Pfam: Dynamin central region [PF01031.22, score=151.0]; Dynamin family [PF00350.25, score=125.4]; Dynamin GTPase effector domain [PF02212.20, score=54.8]; 50S ribosome-binding GTPase [PF01926.25, score=24.2]; AAA ATPase domain [PF13175.8, score=21.4]; Family with sequence similarity 184, A and B [PF15665.7, score=18.9]} {Human: ENSG00000183486, MX2, MX dynamin like GTPase 2, [RH, Score=347, Expect=1e-108]; ENSG00000157601, MX1, MX dynamin like GTPase 1, [RH, Score=334, Expect=1e-104]} {Mouse: ENSMUSG00000023341, Mx2, MX dynamin-like GTPase 2, [RH, Score=343, Expect=3e-108]} {Dmel: FBgn0003392, shi, shibire, [Score=153, Expect=2e-38]} {Celegans: WBGene00001130, dyn-1, Dynamin, [Score=164, Expect=4e-42]} {Smed: dd_Smed_v6_1818_0_1, dd_Smed_v6_1818_0_1, [Score=165, Expect=4e-43]} {RNA1509_19894} {RNA1310_7243} {RNA815_3194} |
| 6. | MligTC455_23753 | 483 | 10.05 | Mlig455_061012 | Neo: Int S/G2/M Age: - |
SAP30BP | 0.95 | - | - | - | - | 0.950 | - | Mlig455_061012 {REF} {Length: 2502} {TRANSSPLICED} {Pfam: HCNGP-like protein [PF07818.15, score=84.6]} {Human: ENSG00000161526, SAP30BP, SAP30 binding protein, [RH, Score=76.6, Expect=3e-15]} {Mouse: ENSMUSG00000020755, Sap30bp, SAP30 binding protein, [RH, Score=75.9, Expect=8e-15]} {Dmel: FBgn0033400, CG2063, [RH, Score=73.6, Expect=4e-14]} {Celegans: WBGene00022057, Y67D2.7, [RH, Score=64.7, Expect=2e-11]} {Smed: dd_Smed_v6_4519_0_1, dd_Smed_v6_4519_0_1, [RH, Score=75.9, Expect=7e-15]} {RNA1509_42033, RNA1509_9343} {RNA1310_13494, RNA1509_42033} {RNA1509_42033, RNA815_12485} |
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