Data search


search
Exact
Search

Results for MligTC455_45796

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_45796 1314 27.37 Mlig455_036531, Mlig455_069120

Neo: -

Age: Up-Down-Down

UBE2Q2

Mlig455_036531 {REF} {Length: 2847} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=40.5]} {Human: ENSG00000140367, UBE2Q2, ubiquitin conjugating enzyme E2 Q2, [RH, Score=270, Expect=3e-88]} {Mouse: ENSMUSG00000042572, Ube2q1, ubiquitin-conjugating enzyme E2Q family member 1, [RH, Score=273, Expect=1e-90]; ENSMUSG00000032307, Ube2q2, ubiquitin-conjugating enzyme E2Q family member 2, [RH, Score=269, Expect=5e-89]} {Dmel: FBgn0023528, CG2924, [Score=290, Expect=2e-95]} {Celegans: WBGene00006720, ubc-25, Ubiquitin-conjugating enzyme E2 25, [Score=228, Expect=2e-71]} {RNA1509_6026} {RNA1310_6079.1} {RNA815_2715}

Mlig455_069120 {REF} {Length: 3220} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=44.8]} {Human: ENSG00000140367, UBE2Q2, ubiquitin conjugating enzyme E2 Q2, [RH, Score=270, Expect=2e-87]; ENSG00000160714, UBE2Q1, ubiquitin conjugating enzyme E2 Q1, [RH, Score=269, Expect=7e-86]} {Mouse: ENSMUSG00000045291, E330021D16Rik, RIKEN cDNA E330021D16 gene, [RH, Score=288, Expect=4e-94]} {Dmel: FBgn0023528, CG2924, [RH, Score=344, Expect=1e-115]} {Celegans: WBGene00006720, ubc-25, Ubiquitin-conjugating enzyme E2 25, [RH, Score=289, Expect=1e-94]} {RNA1509_25233, RNA1509_26798, RNA1509_31012, RNA1509_37516, RNA1509_44958, RNA1509_49953, RNA1509_6026} {RNA1310_6079.1, RNA1509_25233, RNA1509_26798, RNA1509_31012, RNA1509_37516, RNA1509_44958, RNA1509_49953, RNA1509_6026} {RNA1509_25233, RNA1509_26798, RNA1509_31012, RNA1509_37516, RNA1509_44958, RNA1509_49953, RNA1509_6026, RNA815_2715}

Cumulative graph for MligTC455_45796

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.078 5.014 0.29788 0.94764
RegionR2 0.469 5.014 0.42693 0.81762
RegionR3 0.172 5.014 0.73751 1.00000
RegionR4 1.512 5.014 0.01068 0.06413
RegionR5 0.333 5.014 0.49815 0.86129
RegionR6 0.38 5.014 0.44963 1.00000
RegionR7 -1.531 5.014 0.01897 0.25367
RegionR8 -0.258 5.014 0.69080 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.528 5.014 0.71544 1.00000
RegenerationR2 0.054 5.014 0.92781 1.00000
RegenerationR3 -0.292 5.014 0.63931 0.92464
RegenerationR4 -0.855 5.014 0.19405 0.63870
RegenerationR5 0.028 5.014 0.96338 1.00000
RegenerationR6 0.208 5.014 0.74082 0.94749
RegenerationBL 0.421 5.014 0.48911 0.85412
RegenerationTP 0.203 5.014 0.76486 1.00000


Genes with expression patterns similar to MligTC455_45796

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_45796 1314 27.37 Mlig455_036531, Mlig455_069120

Neo: -

Age: Up-Down-Down

UBE2Q2 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_036531 {REF} {Length: 2847} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=40.5]} {Human: ENSG00000140367, UBE2Q2, ubiquitin conjugating enzyme E2 Q2, [RH, Score=270, Expect=3e-88]} {Mouse: ENSMUSG00000042572, Ube2q1, ubiquitin-conjugating enzyme E2Q family member 1, [RH, Score=273, Expect=1e-90]; ENSMUSG00000032307, Ube2q2, ubiquitin-conjugating enzyme E2Q family member 2, [RH, Score=269, Expect=5e-89]} {Dmel: FBgn0023528, CG2924, [Score=290, Expect=2e-95]} {Celegans: WBGene00006720, ubc-25, Ubiquitin-conjugating enzyme E2 25, [Score=228, Expect=2e-71]} {RNA1509_6026} {RNA1310_6079.1} {RNA815_2715}

Mlig455_069120 {REF} {Length: 3220} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=44.8]} {Human: ENSG00000140367, UBE2Q2, ubiquitin conjugating enzyme E2 Q2, [RH, Score=270, Expect=2e-87]; ENSG00000160714, UBE2Q1, ubiquitin conjugating enzyme E2 Q1, [RH, Score=269, Expect=7e-86]} {Mouse: ENSMUSG00000045291, E330021D16Rik, RIKEN cDNA E330021D16 gene, [RH, Score=288, Expect=4e-94]} {Dmel: FBgn0023528, CG2924, [RH, Score=344, Expect=1e-115]} {Celegans: WBGene00006720, ubc-25, Ubiquitin-conjugating enzyme E2 25, [RH, Score=289, Expect=1e-94]} {RNA1509_25233, RNA1509_26798, RNA1509_31012, RNA1509_37516, RNA1509_44958, RNA1509_49953, RNA1509_6026} {RNA1310_6079.1, RNA1509_25233, RNA1509_26798, RNA1509_31012, RNA1509_37516, RNA1509_44958, RNA1509_49953, RNA1509_6026} {RNA1509_25233, RNA1509_26798, RNA1509_31012, RNA1509_37516, RNA1509_44958, RNA1509_49953, RNA1509_6026, RNA815_2715}
2. MligTC455_46239 1406 29.29 Mlig455_040284, Mlig455_040298

Neo: -

Age: -

DNM1L 2.367 0.710 - - 0.702 0.955 -

Mlig455_040284 {REF} {Length: 4109} {Pfam: Dynamin central region [PF01031.22, score=329.5]; Dynamin family [PF00350.25, score=187.5]; Dynamin GTPase effector domain [PF02212.20, score=106.9]; 50S ribosome-binding GTPase [PF01926.25, score=23.8]; AAA ATPase domain [PF13191.8, score=20.3]} {Human: ENSG00000087470, DNM1L, dynamin 1 like, [RH, Score=934, Expect=0.0]} {Mouse: ENSMUSG00000022789, Dnm1l, dynamin 1-like, [RH, Score=928, Expect=0.0]} {Dmel: FBgn0026479, Drp1, Dynamin related protein 1, [RH, Score=914, Expect=0.0]} {Celegans: WBGene00001093, drp-1, Dynamin-Related Protein; Dynamin-related protein, [RH, Score=837, Expect=0.0]} {Smed: dd_Smed_v6_1818_0_1, dd_Smed_v6_1818_0_1, [RH, Score=701, Expect=0.0]} {RNA1509_19829, RNA1509_4425, RNA1509_49692} {RNA1310_7022, RNA1509_19829, RNA1509_4425, RNA1509_49692} {RNA1509_19829, RNA1509_4425, RNA1509_49692, RNA815_5974}

Mlig455_040298 {REF} {Length: 686} {NoTransDecoderORF} {RNA1509_48585} {RNA1310_24902.1, RNA1509_48585} {RNA1509_48585, RNA815_13702.1}
3. MligTC455_17259 601 12.53 Mlig455_044948, Mlig455_055558

Neo: -

Age: -

USP33 1.781 - - - 0.814 - 0.967

Mlig455_044948 {REF} {Length: 3111} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=214.6]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=52.9]; Zn-finger in ubiquitin-hydrolases and other protein [PF02148.21, score=40.9]; DUSP domain [PF06337.14, score=39.0]} {Human: ENSG00000077254, USP33, ubiquitin specific peptidase 33, [Score=334, Expect=1e-101]; ENSG00000136878, USP20, ubiquitin specific peptidase 20, [Score=329, Expect=5e-100]} {Mouse: ENSMUSG00000025437, Usp33, ubiquitin specific peptidase 33, [Score=338, Expect=2e-103]; ENSMUSG00000026854, Usp20, ubiquitin specific peptidase 20, [Score=324, Expect=2e-98]} {Dmel: FBgn0033916, Usp20-33, Ubiquitin specific protease 20/33, [Score=293, Expect=2e-86]} {Celegans: WBGene00010702, usp-33, Ubiquitin carboxyl-terminal hydrolase, [Score=163, Expect=5e-42]} {Smed: dd_Smed_v6_3775_0_1, dd_Smed_v6_3775_0_1, [Score=251, Expect=9e-73]} {RNA1509_43048, RNA1509_47811} {RNA1310_6576.1, RNA1509_47811} {RNA1509_47811, RNA815_6235}

Mlig455_055558 {REF} {Length: 3909} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=211.7]; DUSP domain [PF06337.14, score=72.0]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=55.8]; Zn-finger in ubiquitin-hydrolases and other protein [PF02148.21, score=41.4]} {Human: ENSG00000077254, USP33, ubiquitin specific peptidase 33, [RH, Score=443, Expect=2e-141]; ENSG00000136878, USP20, ubiquitin specific peptidase 20, [RH, Score=438, Expect=6e-140]} {Mouse: ENSMUSG00000025437, Usp33, ubiquitin specific peptidase 33, [RH, Score=449, Expect=2e-144]; ENSMUSG00000026854, Usp20, ubiquitin specific peptidase 20, [RH, Score=434, Expect=3e-138]} {Dmel: FBgn0033916, Usp20-33, Ubiquitin specific protease 20/33, [RH, Score=469, Expect=4e-151]} {Celegans: WBGene00010702, usp-33, Ubiquitin carboxyl-terminal hydrolase, [Score=132, Expect=1e-31]} {Smed: dd_Smed_v6_3775_0_1, dd_Smed_v6_3775_0_1, [RH, Score=347, Expect=2e-107]} {RNA1509_10702, RNA1509_43048} {RNA1310_6576.1, RNA1509_10702, RNA1509_43048} {RNA1509_10702, RNA1509_43048, RNA815_6235}
4. MligTC455_30337 1202 25.04 Mlig455_001951

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.586

0.973 - - - - - 0.973 Mlig455_001951 {REF} {Length: 3371} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=41.1]} {Smed: dd_Smed_v6_6819_0_1, dd_Smed_v6_6819_0_1, [Score=74.3, Expect=1e-14]} {RNA1509_37595} {RNA1310_11967} {RNA815_6232}
5. MligTC455_38503 3112 64.84 Mlig455_063077, Mlig455_063103

Neo: -

Age: -

Region-enriched R4: 1.121/0.01263

LASP1 0.966 - - - 0.966 - -

Mlig455_063077 {REF} {Length: 3347} {Pfam: Variant SH3 domain [PF14604.8, score=55.8]; SH3 domain [PF00018.30, score=50.2]; LIM domain [PF00412.24, score=44.7]; Nebulin repeat [PF00880.20, score=34.0]; Variant SH3 domain [PF07653.19, score=26.9]} {Human: ENSG00000002834, LASP1, LIM and SH3 protein 1, [Score=139, Expect=3e-38]} {Mouse: ENSMUSG00000038366, Lasp1, LIM and SH3 protein 1, [Score=139, Expect=3e-38]} {Dmel: FBgn0063485, Lasp, [Score=145, Expect=3e-40]} {Celegans: WBGene00018367, F42H10.3, LIM and SH3 domain protein F42H10.3, [Score=153, Expect=2e-43]} {Smed: dd_Smed_v6_1218_0_1, dd_Smed_v6_1218_0_1, [RH, Score=121, Expect=2e-32]} {RNA1509_19418, RNA1509_40307} {RNA1310_27016, RNA1509_19418} {RNA1509_19418, RNA815_9838.1}

Mlig455_063103 {REF} {Length: 2833} {TRANSSPLICED} {Pfam: Variant SH3 domain [PF14604.8, score=55.8]; SH3 domain [PF00018.30, score=50.2]; LIM domain [PF00412.24, score=44.7]; Nebulin repeat [PF00880.20, score=34.0]; Variant SH3 domain [PF07653.19, score=26.9]} {Human: ENSG00000002834, LASP1, LIM and SH3 protein 1, [Score=139, Expect=3e-38]} {Mouse: ENSMUSG00000038366, Lasp1, LIM and SH3 protein 1, [Score=139, Expect=3e-38]} {Dmel: FBgn0063485, Lasp, [Score=145, Expect=3e-40]} {Celegans: WBGene00018367, F42H10.3, LIM and SH3 domain protein F42H10.3, [Score=153, Expect=3e-43]} {Smed: dd_Smed_v6_1218_0_1, dd_Smed_v6_1218_0_1, [RH, Score=121, Expect=2e-32]} {RNA1509_40307} {RNA1310_27016} {RNA815_9838.1}
6. MligTC455_29190 1229 25.6 Mlig455_007971, Mlig455_009556, Mlig455_018880, Mlig455_023619, Mlig455_024055, Mlig455_030028, Mlig455_033160, Mlig455_036253, Mlig455_038407, Mlig455_046624, Mlig455_054170, Mlig455_055115, Mlig455_059413, Mlig455_065747, Mlig455_068568, Mlig455_070474

Neo: -

Age: Up-Down-Down

Region-enriched R4: 2.272/0.01373

0.958 - - - 0.958 - -

Mlig455_007971 {REF} {Length: 2529} {Dmel: FBgn0029807, CG3108, [Score=51.6, Expect=1e-06]} {RNA1509_9867} {RNA1310_20135} {RNA815_212.1}

Mlig455_009556 {REF} {Length: 2864} {Pfam: Procyclic acidic repetitive protein (PARP) [PF05887.13, score=20.4]} {RNA1509_13531} {RNA1310_13546} {RNA815_212.2}

Mlig455_018880 {REF} {Length: 2577} {Dmel: FBgn0029807, CG3108, [Score=59.7, Expect=4e-09]} {RNA1509_13531} {RNA1310_20135} {RNA815_212.1}

Mlig455_023619 {REF} {Length: 3824} {Dmel: FBgn0029807, CG3108, [Score=54.7, Expect=3e-07]} {RNA1509_13531, RNA1509_39253} {RNA1310_20135, RNA1509_39253} {RNA1509_39253, RNA815_212.1}

Mlig455_024055 {REF} {Length: 3017} {Dmel: FBgn0029807, CG3108, [Score=57.4, Expect=1e-08]} {RNA1509_13531} {RNA1310_20135} {RNA815_212.1}

Mlig455_030028 {REF} {Length: 4001} {RNA1509_13531} {RNA1310_13546} {RNA815_11087.1}

Mlig455_033160 {REF} {Length: 1351} {Dmel: FBgn0029807, CG3108, [Score=51.6, Expect=1e-07]} {RNA1509_13531} {RNA1310_13546} {RNA815_212.1}

Mlig455_036253 {REF} {Length: 2572} {Dmel: FBgn0029807, CG3108, [Score=60.8, Expect=1e-09]} {RNA1509_13531} {RNA1310_36535} {RNA815_212.1}

Mlig455_038407 {REF} {Length: 907} {Dmel: FBgn0029807, CG3108, [Score=62.8, Expect=5e-11]} {RNA1509_57258} {RNA1310_13546} {RNA815_31604}

Mlig455_046624 {REF} {Length: 2577} {Dmel: FBgn0029807, CG3108, [Score=59.7, Expect=4e-09]} {RNA1509_13531} {RNA1310_20135} {RNA815_212.1}

Mlig455_054170 {REF} {Length: 2186} {Dmel: FBgn0029807, CG3108, [Score=56.2, Expect=9e-08]} {RNA1509_13531} {RNA1310_13546} {RNA815_212.1}

Mlig455_055115 {REF} {Length: 2805} {Dmel: FBgn0029807, CG3108, [Score=58.2, Expect=2e-08]} {RNA1509_13531} {RNA1310_20135} {RNA815_212.1}

Mlig455_059413 {REF} {Length: 2529} {Dmel: FBgn0029807, CG3108, [Score=51.6, Expect=1e-06]} {RNA1509_9867} {RNA1310_20135} {RNA815_212.1}

Mlig455_065747 {REF} {Length: 1950} {Dmel: FBgn0029807, CG3108, [Score=54.3, Expect=2e-07]} {RNA1509_13531, RNA1509_56942} {RNA1310_13546, RNA1509_56942} {RNA1509_56942, RNA815_31604}

Mlig455_068568 {REF} {Length: 1632} {Dmel: FBgn0029807, CG3108, [Score=54.7, Expect=3e-07]} {RNA1509_13531} {RNA1310_58438} {RNA815_31604}

Mlig455_070474 {REF} {Length: 2731} {Dmel: FBgn0029807, CG3108, [Score=58.2, Expect=2e-08]} {RNA1509_13531} {RNA1310_20135} {RNA815_212.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA