Data search
Results for MligTC455_45806
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_45806 | 76 | 1.58 | Mlig455_018957 | Neo: - Age: - Region-enriched R5: 4.739/0.00991 |
Mlig455_018957 {REF} {Length: 386} {Pfam: Ribosomal protein L36 [PF00444.20, score=30.2]} {Dmel: FBgn0042112, mRpL36, mitochondrial ribosomal protein L36, [Score=42.0, Expect=4e-06]} {Smed: dd_Smed_v6_3180_0_1, dd_Smed_v6_3180_0_1, [RH, Score=58.5, Expect=5e-13]} {RNA1509_44103} {RNA1310_64854.3} {RNA815_34534} |
Cumulative graph for MligTC455_45806
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.007 | 1.653 | 0.99990 | 1.00000 | |
| RegionR2 | 0.308 | 1.653 | 0.58621 | 0.94087 | |
| RegionR3 | 0.762 | 1.653 | 0.55472 | 1.00000 | |
| RegionR4 | 4.86 | 1.653 | 0.03098 | 0.13905 | |
| RegionR5 | 4.739 | 1.653 | 0.00097 | 0.00991 | |
| RegionR6 | -0.422 | 1.653 | 0.99967 | 1.00000 | |
| RegionR7 | -1.785 | 1.653 | 0.99977 | 1.00000 | |
| RegionR8 | -1.455 | 1.653 | 0.99973 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.648 | 1.653 | 0.99986 | 1.00000 | |
| RegenerationR2 | 0.116 | 1.653 | 0.93177 | 1.00000 | |
| RegenerationR3 | 1.669 | 1.653 | 0.12759 | 0.54959 | |
| RegenerationR4 | 1.096 | 1.653 | 0.31099 | 0.75079 | |
| RegenerationR5 | 0.315 | 1.653 | 0.76669 | 0.97802 | |
| RegenerationR6 | 3.995 | 1.653 | 0.02538 | 0.19882 | |
| RegenerationBL | -2.534 | 1.653 | 0.99987 | 1.00000 | |
| RegenerationTP | 2.405 | 1.653 | 0.39908 | 0.82853 |
Genes with expression patterns similar to MligTC455_45806
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_45806 | 76 | 1.58 | Mlig455_018957 | Neo: - Age: - Region-enriched R5: 4.739/0.00991 |
4 | - | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_018957 {REF} {Length: 386} {Pfam: Ribosomal protein L36 [PF00444.20, score=30.2]} {Dmel: FBgn0042112, mRpL36, mitochondrial ribosomal protein L36, [Score=42.0, Expect=4e-06]} {Smed: dd_Smed_v6_3180_0_1, dd_Smed_v6_3180_0_1, [RH, Score=58.5, Expect=5e-13]} {RNA1509_44103} {RNA1310_64854.3} {RNA815_34534} | |
| 2. | MligTC455_32368 | 558 | 11.62 | Mlig455_011256 | Neo: - Age: - |
0.955 | - | - | - | 0.955 | - | - | Mlig455_011256 {REF} {Length: 2914} {RNA1509_58701, RNA1509_9596} {RNA1310_1782.1, RNA1509_58701} {RNA1509_58701, RNA815_7107} | |
| 3. | MligTC455_01216 | 6 | 0.12 | Mlig455_040559 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_040559 {REF} {Length: 540} {NoTransDecoderORF} {RNA1310_103609} | |
| 4. | MligTC455_41633 | 245 | 5.09 | Mlig455_039532 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_039532 {REF} {Length: 419} {NoTransDecoderORF} {RNA1509_33706} {RNA1310_107559} {RNA815_55368} | |
| 5. | MligTC455_18284 | 58 | 1.21 | Mlig455_020141 | Neo: - Age: logFC(26M/2M)=0.808 |
XPO1 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_020141 {REF} {Length: 3553} {TRANSSPLICED} {Pfam: CRM1 C terminal [PF08767.13, score=277.8]; CRM1 / Exportin repeat 2 [PF18784.3, score=119.1]; CRM1 / Exportin repeat 3 [PF18787.3, score=97.0]; Exportin 1-like protein [PF08389.14, score=84.0]; Chromosome region maintenance or exportin repeat [PF18777.3, score=62.5]; Importin-beta N-terminal domain [PF03810.21, score=50.9]; Down-regulated in metastasis [PF07539.14, score=22.4]} {Human: ENSG00000082898, XPO1, exportin 1, [Score=1325, Expect=0.0]} {Mouse: ENSMUSG00000020290, Xpo1, exportin 1, [Score=1321, Expect=0.0]} {Dmel: FBgn0020497, emb, embargoed, [Score=1167, Expect=0.0]} {Celegans: WBGene00002078, xpo-1, EXPOrtin (Nuclear export receptor), [Score=922, Expect=0.0]} {Smed: dd_Smed_v6_3264_0_1, dd_Smed_v6_3264_0_1, [Score=1295, Expect=0.0]} {RNA1509_1988} {RNA1310_2868} {RNA815_846} |
Berezikov Lab - 2020-2021 © ERIBA