TomoSeq data search

Data search

Results for MligTC455_45808

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_45808

555

11.56

Mlig455_027307

Neo: -

Age: -

GNB2

Mlig455_027307 {REF} {Length: 2306} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=114.4]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=23.8]} {Human: ENSG00000172354, GNB2, G protein subunit beta 2, [Score=338, Expect=3e-115]; ENSG00000078369, GNB1, G protein subunit beta 1, [Score=338, Expect=3e-115]; ENSG00000114450, GNB4, G protein subunit beta 4, [Score=337, Expect=7e-115]; ENSG00000111664, GNB3, G protein subunit beta 3, [Score=326, Expect=3e-110]} {Mouse: ENSMUSG00000029713, Gnb2, guanine nucleotide binding protein (G protein), beta 2, [Score=338, Expect=2e-115]; ENSMUSG00000029064, Gnb1, guanine nucleotide binding protein (G protein), beta 1, [Score=338, Expect=2e-115]; ENSMUSG00000023439, Gnb3, guanine nucleotide binding protein (G protein), beta 3, [Score=327, Expect=3e-111]; ENSMUSG00000027669, Gnb4, guanine nucleotide binding protein (G protein), beta 4, [Score=324, Expect=5e-110]} {Dmel: FBgn0001105, Gbeta13F, G protein beta-subunit 13F, [Score=349, Expect=7e-120]} {Celegans: WBGene00001679, gpb-1, Guanine nucleotide-binding protein subunit beta-1, [Score=345, Expect=3e-118]} {Smed: dd_Smed_v6_2872_0_1, dd_Smed_v6_2872_0_1, [RH, Score=375, Expect=4e-130]} {RNA1509_24173, RNA1509_26331, RNA1509_34859} {RNA1310_7323, RNA1509_24173, RNA1509_34859} {RNA1509_24173, RNA1509_34859, RNA815_2947}

Cumulative graph for MligTC455_45808

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.339	3.937	0.78451	1.00000
RegionR2	1.056	3.937	0.03204	0.20353
RegionR3	0.286	3.937	0.44052	0.95657
RegionR4	-0.267	3.937	0.59171	0.90655
RegionR5	-0.491	3.937	0.16633	0.43232
RegionR6	-0.009	3.937	0.97971	1.00000
RegionR7	-0.35	3.937	0.53077	1.00000
RegionR8	0.114	3.937	0.85823	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.024	3.937	0.98668	1.00000
RegenerationR2	-0.394	3.937	0.30220	0.74377
RegenerationR3	-0.12	3.937	0.78634	0.97757
RegenerationR4	-0.272	3.937	0.55629	0.89522
RegenerationR5	-0.342	3.937	0.42140	0.81200
RegenerationR6	0.238	3.937	0.58431	0.86032
RegenerationBL	-0.236	3.937	0.70532	1.00000
RegenerationTP	-0.851	3.937	0.21856	0.66197

Genes with expression patterns similar to MligTC455_45808

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_45808	555	11.56	Mlig455_027307	Neo: - Age: -	GNB2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_027307 {REF} {Length: 2306} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=114.4]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=23.8]} {Human: ENSG00000172354, GNB2, G protein subunit beta 2, [Score=338, Expect=3e-115]; ENSG00000078369, GNB1, G protein subunit beta 1, [Score=338, Expect=3e-115]; ENSG00000114450, GNB4, G protein subunit beta 4, [Score=337, Expect=7e-115]; ENSG00000111664, GNB3, G protein subunit beta 3, [Score=326, Expect=3e-110]} {Mouse: ENSMUSG00000029713, Gnb2, guanine nucleotide binding protein (G protein), beta 2, [Score=338, Expect=2e-115]; ENSMUSG00000029064, Gnb1, guanine nucleotide binding protein (G protein), beta 1, [Score=338, Expect=2e-115]; ENSMUSG00000023439, Gnb3, guanine nucleotide binding protein (G protein), beta 3, [Score=327, Expect=3e-111]; ENSMUSG00000027669, Gnb4, guanine nucleotide binding protein (G protein), beta 4, [Score=324, Expect=5e-110]} {Dmel: FBgn0001105, Gbeta13F, G protein beta-subunit 13F, [Score=349, Expect=7e-120]} {Celegans: WBGene00001679, gpb-1, Guanine nucleotide-binding protein subunit beta-1, [Score=345, Expect=3e-118]} {Smed: dd_Smed_v6_2872_0_1, dd_Smed_v6_2872_0_1, [RH, Score=375, Expect=4e-130]} {RNA1509_24173, RNA1509_26331, RNA1509_34859} {RNA1310_7323, RNA1509_24173, RNA1509_34859} {RNA1509_24173, RNA1509_34859, RNA815_2947}
2.	MligTC455_45809	600	12.5	Mlig455_067476	Neo: - Age: Down-Up-Down	GNB1	5.18	0.977	0.802	0.955	0.729	0.807	0.910	Mlig455_067476 {REF} {Length: 2452} {Pfam: WD domain, G-beta repeat [PF00400.34, score=114.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=24.6]} {Human: ENSG00000078369, GNB1, G protein subunit beta 1, [Score=339, Expect=2e-115]; ENSG00000172354, GNB2, G protein subunit beta 2, [Score=339, Expect=2e-115]; ENSG00000114450, GNB4, G protein subunit beta 4, [Score=338, Expect=4e-115]; ENSG00000111664, GNB3, G protein subunit beta 3, [Score=327, Expect=1e-110]} {Mouse: ENSMUSG00000029064, Gnb1, guanine nucleotide binding protein (G protein), beta 1, [Score=339, Expect=1e-115]; ENSMUSG00000029713, Gnb2, guanine nucleotide binding protein (G protein), beta 2, [Score=339, Expect=1e-115]; ENSMUSG00000023439, Gnb3, guanine nucleotide binding protein (G protein), beta 3, [Score=328, Expect=3e-111]; ENSMUSG00000027669, Gnb4, guanine nucleotide binding protein (G protein), beta 4, [Score=325, Expect=3e-110]} {Dmel: FBgn0001105, Gbeta13F, G protein beta-subunit 13F, [Score=350, Expect=5e-120]} {Celegans: WBGene00001679, gpb-1, Guanine nucleotide-binding protein subunit beta-1, [Score=345, Expect=2e-118]} {Smed: dd_Smed_v6_2872_0_1, dd_Smed_v6_2872_0_1, [RH, Score=378, Expect=4e-131]} {RNA1509_43184, RNA1509_4807} {RNA1310_7323, RNA1509_43184} {RNA1509_43184, RNA815_2947}
3.	MligTC455_17997	249	5.18	Mlig455_031355	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.965 Regeneration-downregulated R6: -3.161 Regeneration-depleted R6: -3.161	ANK2	1.716	-	-	0.963	-	0.753	-	Mlig455_031355 {REF} {Length: 3392} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=225.1]; Ankyrin repeats (many copies) [PF13637.8, score=151.6]; Ankyrin repeat [PF00023.32, score=151.0]; Ankyrin repeat [PF13606.8, score=136.9]; Ankyrin repeats (many copies) [PF13857.8, score=128.5]; Caspase domain [PF00656.24, score=64.0]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=117, Expect=3e-26]; ENSG00000151150, ANK3, ankyrin 3, [Score=113, Expect=7e-25]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=127, Expect=2e-29]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=130, Expect=1e-30]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=120, Expect=1e-27]} {Smed: dd_Smed_v6_2072_0_24, dd_Smed_v6_2072_0_24, [Score=115, Expect=5e-26]} {RNA1509_59314, RNA1509_6998} {RNA1310_4219, RNA1509_59314, RNA1509_6998} {RNA1509_59314, RNA1509_6998, RNA815_1303}
4.	MligTC455_42627	609	12.68	Mlig455_051482	Neo: - Age: -		1.679	-	-	0.973	-	-	0.706	Mlig455_051482 {REF} {Length: 2460} {TRANSSPLICED} {Pfam: POT family [PF00854.23, score=54.2]} {RNA1509_27762} {RNA1310_7871, RNA1509_27762} {RNA1509_27762, RNA815_8069.1}
5.	MligTC455_34128	309	6.43	Mlig455_051086	Neo: - Age: -	UBE2M	0.962	-	-	0.962	-	-	-	Mlig455_051086 {REF} {Length: 3334} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=66.9]} {Human: ENSG00000130725, UBE2M, ubiquitin conjugating enzyme E2 M, [Score=91.3, Expect=1e-20]} {Mouse: ENSMUSG00000005575, Ube2m, ubiquitin-conjugating enzyme E2M, [Score=91.3, Expect=6e-21]} {Dmel: FBgn0035853, UbcE2M, Ubiquitin conjugating enzyme E2M, [Score=86.3, Expect=3e-19]} {Celegans: WBGene00006708, ubc-13, Ubiquitin-conjugating enzyme E2 13, [Score=59.7, Expect=2e-10]} {Smed: dd_Smed_v6_4227_0_1, dd_Smed_v6_4227_0_1, [RH, Score=162, Expect=2e-43]} {RNA1509_16034, RNA1509_37633, RNA1509_50646, RNA1509_60178} {RNA1310_9476.1, RNA1509_16034, RNA1509_37633, RNA1509_50646, RNA1509_60178} {RNA1509_16034, RNA1509_37633, RNA1509_50646, RNA1509_60178, RNA815_13413}
6.	MligTC455_08274	314	6.54	Mlig455_044033	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.964	ATP2B2	0.957	-	-	0.957	-	-	-	Mlig455_044033 {REF} {Length: 2440} {Pfam: Cation transporting ATPase, C-terminus [PF00689.23, score=148.8]; Cation transport ATPase (P-type) [PF13246.8, score=63.0]; haloacid dehalogenase-like hydrolase [PF00702.28, score=42.5]; haloacid dehalogenase-like hydrolase [PF08282.14, score=29.2]; Plasma membrane calcium transporter ATPase C terminal [PF12424.10, score=23.0]} {Human: ENSG00000157087, ATP2B2, ATPase plasma membrane Ca2+ transporting 2, [Score=771, Expect=0.0]; ENSG00000067842, ATP2B3, ATPase plasma membrane Ca2+ transporting 3, [Score=768, Expect=0.0]; ENSG00000058668, ATP2B4, ATPase plasma membrane Ca2+ transporting 4, [Score=768, Expect=0.0]; ENSG00000070961, ATP2B1, ATPase plasma membrane Ca2+ transporting 1, [Score=756, Expect=0.0]} {Mouse: ENSMUSG00000019943, Atp2b1, ATPase, Ca++ transporting, plasma membrane 1, [Score=771, Expect=0.0]; ENSMUSG00000030302, Atp2b2, ATPase, Ca++ transporting, plasma membrane 2, [Score=767, Expect=0.0]; ENSMUSG00000031376, Atp2b3, ATPase, Ca++ transporting, plasma membrane 3, [Score=763, Expect=0.0]; ENSMUSG00000026463, Atp2b4, ATPase, Ca++ transporting, plasma membrane 4, [Score=737, Expect=0.0]} {Dmel: FBgn0259214, PMCA, plasma membrane calcium ATPase, [Score=827, Expect=0.0]} {Celegans: WBGene00003153, mca-3, Calcium-transporting ATPase, [Score=763, Expect=0.0]} {Smed: dd_Smed_v6_1721_0_1, dd_Smed_v6_1721_0_1, [Score=823, Expect=0.0]} {RNA1509_22395} {RNA1310_13940, RNA1509_22395} {RNA1509_22395, RNA815_12545}
7.	MligTC455_23643	406	8.46	Mlig455_067289	Neo: - Age: Down-Up-Up	STK33	0.954	-	-	0.954	-	-	-	Mlig455_067289 {REF} {Length: 2596} {Pfam: Protein kinase domain [PF00069.27, score=206.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=137.9]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=22.3]} {Human: ENSG00000130413, STK33, serine/threonine kinase 33, [Score=184, Expect=7e-53]} {Mouse: ENSMUSG00000031027, Stk33, serine/threonine kinase 33, [Score=190, Expect=4e-55]} {Dmel: FBgn0016126, CaMKI, Calcium/calmodulin-dependent protein kinase I, [Score=137, Expect=2e-36]} {Celegans: WBGene00000553, cmk-1, Calcium/calmodulin-dependent protein kinase type 1, [Score=129, Expect=5e-34]} {Smed: dd_Smed_v6_12461_0_1, dd_Smed_v6_12461_0_1, [RH, Score=231, Expect=1e-72]} {RNA1509_36009} {RNA1310_11665} {RNA815_6928}

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