TomoSeq data search

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Results for MligTC455_45834

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_45834	1467	30.55	Mlig455_013213, Mlig455_013236, Mlig455_013308	Neo: - Age: -	SDHAF4	Mlig455_013213 {REF} {Length: 1692} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=26.8} {Pfam: Protein of unknown function (DUF1674) [PF07896.14, score=76.5]} {Human: ENSG00000154079, SDHAF4, succinate dehydrogenase complex assembly factor 4, [RH, Score=78.2, Expect=2e-19]} {Mouse: ENSMUSG00000026154, Sdhaf4, succinate dehydrogenase complex assembly factor 4, [RH, Score=75.1, Expect=2e-18]} {Dmel: FBgn0031971, Sirup, Starvation-upregulated protein, [RH, Score=73.9, Expect=5e-18]} {Celegans: WBGene00020937, W02D3.12, [RH, Score=58.5, Expect=2e-12]} {RNA1509_24041, RNA1509_2488} {RNA1310_58351.1, RNA1509_24041} {RNA1509_24041, RNA815_32570} Mlig455_013236 {REF} {Length: 1206} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=26.8} {Pfam: Protein of unknown function (DUF1674) [PF07896.14, score=76.5]} {Human: ENSG00000154079, SDHAF4, succinate dehydrogenase complex assembly factor 4, [RH, Score=78.2, Expect=2e-19]} {Mouse: ENSMUSG00000026154, Sdhaf4, succinate dehydrogenase complex assembly factor 4, [RH, Score=75.1, Expect=2e-18]} {Dmel: FBgn0031971, Sirup, Starvation-upregulated protein, [RH, Score=73.9, Expect=5e-18]} {Celegans: WBGene00020937, W02D3.12, [RH, Score=58.5, Expect=2e-12]} {RNA1509_24041} {RNA1310_58351.1} {RNA815_32570} Mlig455_013308 {REF} {Length: 1689} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=26.8} {Pfam: Protein of unknown function (DUF1674) [PF07896.14, score=76.5]} {Human: ENSG00000154079, SDHAF4, succinate dehydrogenase complex assembly factor 4, [RH, Score=78.2, Expect=2e-19]} {Mouse: ENSMUSG00000026154, Sdhaf4, succinate dehydrogenase complex assembly factor 4, [RH, Score=75.1, Expect=2e-18]} {Dmel: FBgn0031971, Sirup, Starvation-upregulated protein, [RH, Score=73.9, Expect=5e-18]} {Celegans: WBGene00020937, W02D3.12, [RH, Score=58.5, Expect=2e-12]} {RNA1509_2488} {RNA1310_58351.1} {RNA815_32570}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_45834

1467

30.55

Mlig455_013213, Mlig455_013236, Mlig455_013308

Neo: -

Age: -

SDHAF4

Mlig455_013213 {REF} {Length: 1692} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=26.8} {Pfam: Protein of unknown function (DUF1674) [PF07896.14, score=76.5]} {Human: ENSG00000154079, SDHAF4, succinate dehydrogenase complex assembly factor 4, [RH, Score=78.2, Expect=2e-19]} {Mouse: ENSMUSG00000026154, Sdhaf4, succinate dehydrogenase complex assembly factor 4, [RH, Score=75.1, Expect=2e-18]} {Dmel: FBgn0031971, Sirup, Starvation-upregulated protein, [RH, Score=73.9, Expect=5e-18]} {Celegans: WBGene00020937, W02D3.12, [RH, Score=58.5, Expect=2e-12]} {RNA1509_24041, RNA1509_2488} {RNA1310_58351.1, RNA1509_24041} {RNA1509_24041, RNA815_32570}

Mlig455_013236 {REF} {Length: 1206} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=26.8} {Pfam: Protein of unknown function (DUF1674) [PF07896.14, score=76.5]} {Human: ENSG00000154079, SDHAF4, succinate dehydrogenase complex assembly factor 4, [RH, Score=78.2, Expect=2e-19]} {Mouse: ENSMUSG00000026154, Sdhaf4, succinate dehydrogenase complex assembly factor 4, [RH, Score=75.1, Expect=2e-18]} {Dmel: FBgn0031971, Sirup, Starvation-upregulated protein, [RH, Score=73.9, Expect=5e-18]} {Celegans: WBGene00020937, W02D3.12, [RH, Score=58.5, Expect=2e-12]} {RNA1509_24041} {RNA1310_58351.1} {RNA815_32570}

Mlig455_013308 {REF} {Length: 1689} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=26.8} {Pfam: Protein of unknown function (DUF1674) [PF07896.14, score=76.5]} {Human: ENSG00000154079, SDHAF4, succinate dehydrogenase complex assembly factor 4, [RH, Score=78.2, Expect=2e-19]} {Mouse: ENSMUSG00000026154, Sdhaf4, succinate dehydrogenase complex assembly factor 4, [RH, Score=75.1, Expect=2e-18]} {Dmel: FBgn0031971, Sirup, Starvation-upregulated protein, [RH, Score=73.9, Expect=5e-18]} {Celegans: WBGene00020937, W02D3.12, [RH, Score=58.5, Expect=2e-12]} {RNA1509_2488} {RNA1310_58351.1} {RNA815_32570}

Cumulative graph for MligTC455_45834

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.888	5.12	0.07073	0.59541
RegionR2	1.005	5.12	0.05586	0.28346
RegionR3	0.64	5.12	0.11366	0.58664
RegionR4	0.474	5.12	0.32958	0.64767
RegionR5	0.416	5.12	0.28271	0.61176
RegionR6	0.256	5.12	0.55417	1.00000
RegionR7	-0.773	5.12	0.11506	0.64276
RegionR8	-0.132	5.12	0.79444	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.186	5.12	0.43509	1.00000
RegenerationR2	0.206	5.12	0.67004	0.94540
RegenerationR3	0.279	5.12	0.60160	0.90875
RegenerationR4	0.057	5.12	0.91420	1.00000
RegenerationR5	0.346	5.12	0.49467	0.85573
RegenerationR6	0.124	5.12	0.81579	0.98486
RegenerationBL	0.058	5.12	0.91974	1.00000
RegenerationTP	-0.108	5.12	0.86166	1.00000

Genes with expression patterns similar to MligTC455_45834

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_45834	1467	30.55	Mlig455_013213, Mlig455_013236, Mlig455_013308	Neo: - Age: -	SDHAF4	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_013213 {REF} {Length: 1692} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=26.8} {Pfam: Protein of unknown function (DUF1674) [PF07896.14, score=76.5]} {Human: ENSG00000154079, SDHAF4, succinate dehydrogenase complex assembly factor 4, [RH, Score=78.2, Expect=2e-19]} {Mouse: ENSMUSG00000026154, Sdhaf4, succinate dehydrogenase complex assembly factor 4, [RH, Score=75.1, Expect=2e-18]} {Dmel: FBgn0031971, Sirup, Starvation-upregulated protein, [RH, Score=73.9, Expect=5e-18]} {Celegans: WBGene00020937, W02D3.12, [RH, Score=58.5, Expect=2e-12]} {RNA1509_24041, RNA1509_2488} {RNA1310_58351.1, RNA1509_24041} {RNA1509_24041, RNA815_32570} Mlig455_013236 {REF} {Length: 1206} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=26.8} {Pfam: Protein of unknown function (DUF1674) [PF07896.14, score=76.5]} {Human: ENSG00000154079, SDHAF4, succinate dehydrogenase complex assembly factor 4, [RH, Score=78.2, Expect=2e-19]} {Mouse: ENSMUSG00000026154, Sdhaf4, succinate dehydrogenase complex assembly factor 4, [RH, Score=75.1, Expect=2e-18]} {Dmel: FBgn0031971, Sirup, Starvation-upregulated protein, [RH, Score=73.9, Expect=5e-18]} {Celegans: WBGene00020937, W02D3.12, [RH, Score=58.5, Expect=2e-12]} {RNA1509_24041} {RNA1310_58351.1} {RNA815_32570} Mlig455_013308 {REF} {Length: 1689} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=26.8} {Pfam: Protein of unknown function (DUF1674) [PF07896.14, score=76.5]} {Human: ENSG00000154079, SDHAF4, succinate dehydrogenase complex assembly factor 4, [RH, Score=78.2, Expect=2e-19]} {Mouse: ENSMUSG00000026154, Sdhaf4, succinate dehydrogenase complex assembly factor 4, [RH, Score=75.1, Expect=2e-18]} {Dmel: FBgn0031971, Sirup, Starvation-upregulated protein, [RH, Score=73.9, Expect=5e-18]} {Celegans: WBGene00020937, W02D3.12, [RH, Score=58.5, Expect=2e-12]} {RNA1509_2488} {RNA1310_58351.1} {RNA815_32570}
2.	MligTC455_19701	63	1.32	Mlig455_039776	Neo: - Age: - Region-enriched R4: 4.356/0.04826		0.964	-	-	-	-	0.964	-	Mlig455_039776 {REF} {Length: 884} {NoTransDecoderORF} {RNA1310_39282} {RNA815_40382}
3.	MligTC455_20309	1142	23.79	Mlig455_022348	Neo: - Age: Up-Down-Up	PLPP1	0.964	-	-	-	0.964	-	-	Mlig455_022348 {REF} {Length: 1741} {Pfam: PAP2 superfamily [PF01569.23, score=90.4]} {Human: ENSG00000067113, PLPP1, phospholipid phosphatase 1, [Score=100, Expect=5e-25]; ENSG00000141934, PLPP2, phospholipid phosphatase 2, [Score=95.9, Expect=3e-24]} {Mouse: ENSMUSG00000021759, Plpp1, phospholipid phosphatase 1, [Score=101, Expect=1e-25]} {Dmel: FBgn0016078, wun, wunen, [Score=103, Expect=2e-26]} {Celegans: WBGene00018756, F53C3.13, [Score=99.4, Expect=1e-24]} {Smed: dd_Smed_v6_1907_0_1, dd_Smed_v6_1907_0_1, [Score=84.7, Expect=7e-20]} {RNA1509_5086} {RNA1310_10493.1} {RNA815_8680.1}
4.	MligTC455_16643	95	1.98	Mlig455_069782	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_069782 {REF} {Length: 2907} {NoTransDecoderORF} {RNA1509_10472, RNA1509_41077} {RNA1310_13821, RNA1509_10472, RNA1509_41077} {RNA1509_10472, RNA1509_41077, RNA815_19037}