Data search
Results for MligTC455_45845
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_45845 | 905 | 18.84 | Mlig455_051943, Mlig455_053103 | Neo: Irradiation Age: - |
PTPN4 | Mlig455_051943 {REF} {Length: 1715} {NoTransDecoderORF} {RNA1509_40811} {RNA1310_21250.2} {RNA815_8664} Mlig455_053103 {REF} {Length: 3700} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=227.6]; PDZ domain [PF00595.26, score=65.3]; Tyrosine phosphatase family [PF13350.8, score=26.3]; PDZ domain [PF17820.3, score=22.6]; Dual specificity phosphatase, catalytic domain [PF00782.22, score=21.8]} {Human: ENSG00000088179, PTPN4, protein tyrosine phosphatase, non-receptor type 4, [RH, Score=423, Expect=1e-137]} {Mouse: ENSMUSG00000026384, Ptpn4, protein tyrosine phosphatase, non-receptor type 4, [RH, Score=422, Expect=2e-137]} {Dmel: FBgn0261985, Ptpmeg, Protein tyrosine phosphatase Meg, [Score=266, Expect=3e-78]} {Celegans: WBGene00004213, ptp-1, Tyrosine-protein phosphatase 1, [RH, Score=386, Expect=1e-127]} {Smed: dd_Smed_v6_9236_0_1, dd_Smed_v6_9236_0_1, [Score=359, Expect=7e-113]} {RNA1509_24830} {RNA1310_4481.3} {RNA815_5036} |
Cumulative graph for MligTC455_45845
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.312 | 4.42 | 0.73882 | 1.00000 | |
| RegionR2 | 0.036 | 4.42 | 0.93333 | 1.00000 | |
| RegionR3 | -1.256 | 4.42 | 0.00181 | 0.04587 | |
| RegionR4 | 0.495 | 4.42 | 0.20931 | 0.49338 | |
| RegionR5 | 0.601 | 4.42 | 0.05988 | 0.21305 | |
| RegionR6 | -0.117 | 4.42 | 0.75204 | 1.00000 | |
| RegionR7 | 0.311 | 4.42 | 0.47916 | 1.00000 | |
| RegionR8 | 0.242 | 4.42 | 0.66430 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.701 | 4.42 | 0.60534 | 1.00000 | |
| RegenerationR2 | 0.001 | 4.42 | 0.99752 | 1.00000 | |
| RegenerationR3 | 0.92 | 4.42 | 0.03640 | 0.33797 | |
| RegenerationR4 | -0.144 | 4.42 | 0.71235 | 0.95826 | |
| RegenerationR5 | 0.278 | 4.42 | 0.45001 | 0.83092 | |
| RegenerationR6 | 0.215 | 4.42 | 0.60532 | 0.87129 | |
| RegenerationBL | -0.654 | 4.42 | 0.17785 | 0.50622 | |
| RegenerationTP | -2.057 | 4.42 | 0.00084 | 0.04346 |
Genes with expression patterns similar to MligTC455_45845
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_45845 | 905 | 18.84 | Mlig455_051943, Mlig455_053103 | Neo: Irradiation Age: - |
PTPN4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_051943 {REF} {Length: 1715} {NoTransDecoderORF} {RNA1509_40811} {RNA1310_21250.2} {RNA815_8664} Mlig455_053103 {REF} {Length: 3700} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=227.6]; PDZ domain [PF00595.26, score=65.3]; Tyrosine phosphatase family [PF13350.8, score=26.3]; PDZ domain [PF17820.3, score=22.6]; Dual specificity phosphatase, catalytic domain [PF00782.22, score=21.8]} {Human: ENSG00000088179, PTPN4, protein tyrosine phosphatase, non-receptor type 4, [RH, Score=423, Expect=1e-137]} {Mouse: ENSMUSG00000026384, Ptpn4, protein tyrosine phosphatase, non-receptor type 4, [RH, Score=422, Expect=2e-137]} {Dmel: FBgn0261985, Ptpmeg, Protein tyrosine phosphatase Meg, [Score=266, Expect=3e-78]} {Celegans: WBGene00004213, ptp-1, Tyrosine-protein phosphatase 1, [RH, Score=386, Expect=1e-127]} {Smed: dd_Smed_v6_9236_0_1, dd_Smed_v6_9236_0_1, [Score=359, Expect=7e-113]} {RNA1509_24830} {RNA1310_4481.3} {RNA815_5036} |
| 2. | MligTC455_33224 | 583 | 12.14 | Mlig455_062467 | Neo: - Age: - |
PTPRR | 0.981 | 0.981 | - | - | - | - | - | Mlig455_062467 {REF} {Length: 2901} {TRANSSPLICED} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=215.2]; Tyrosine phosphatase family [PF13350.8, score=20.4]; Adenovirus E3 region protein CR2 [PF02439.17, score=18.4]} {Human: ENSG00000153233, PTPRR, protein tyrosine phosphatase, receptor type R, [RH, Score=233, Expect=4e-71]} {Mouse: ENSMUSG00000020151, Ptprr, protein tyrosine phosphatase, receptor type, R, [RH, Score=230, Expect=2e-69]} {Dmel: FBgn0004369, Ptp99A, Protein tyrosine phosphatase 99A, [Score=151, Expect=4e-39]} {Celegans: WBGene00004215, ptp-3, Tyrosine-protein phosphatase Lar-like, [Score=152, Expect=1e-39]} {Smed: dd_Smed_v6_8755_0_1, dd_Smed_v6_8755_0_1, [RH, Score=253, Expect=2e-78]} {RNA1509_58461} {RNA1310_7060.2} {RNA815_5407.1} |
Berezikov Lab - 2020-2021 © ERIBA