Data search
Results for MligTC455_45955
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_45955 | 1216 | 25.33 | Mlig455_018256 | Neo: - Age: - Region-enriched R4: 1.790/0.00004 |
PDCD5 | Mlig455_018256 {REF} {Length: 710} {TRANSSPLICED} {Pfam: Double-stranded DNA-binding domain [PF01984.22, score=92.4]} {Human: ENSG00000105185, PDCD5, programmed cell death 5, [RH, Score=92.8, Expect=5e-25]} {Mouse: ENSMUSG00000030417, Pdcd5, programmed cell death 5, [RH, Score=93.2, Expect=3e-25]} {Dmel: FBgn0036580, PDCD-5, Programmed Cell Death 5, [RH, Score=94.7, Expect=6e-26]} {Celegans: WBGene00008398, D2005.3, [RH, Score=85.5, Expect=2e-22]} {Smed: dd_Smed_v6_2989_0_1, dd_Smed_v6_2989_0_1, [RH, Score=89.0, Expect=4e-24]} {RNA1509_10095, RNA1509_57466} {RNA1310_49699, RNA1509_10095, RNA1509_57466} {RNA1509_10095, RNA1509_57466, RNA815_22842.2} |
Cumulative graph for MligTC455_45955
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.127 | 4.873 | 0.87294 | 1.00000 | |
| RegionR2 | -0.876 | 4.873 | 0.02117 | 0.15902 | |
| RegionR3 | 0.058 | 4.873 | 0.84761 | 1.00000 | |
| RegionR4 | 1.79 | 4.873 | 0.00000 | 0.00004 | |
| RegionR5 | 1.009 | 4.873 | 0.00034 | 0.00438 | |
| RegionR6 | 0.043 | 4.873 | 0.89160 | 1.00000 | |
| RegionR7 | -0.571 | 4.873 | 0.15861 | 0.73571 | |
| RegionR8 | -1.58 | 4.873 | 0.00419 | 0.11307 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.168 | 4.873 | 0.32921 | 1.00000 | |
| RegenerationR2 | -0.227 | 4.873 | 0.50779 | 0.87458 | |
| RegenerationR3 | -0.508 | 4.873 | 0.16527 | 0.59958 | |
| RegenerationR4 | -0.634 | 4.873 | 0.08424 | 0.45887 | |
| RegenerationR5 | -0.692 | 4.873 | 0.04069 | 0.33208 | |
| RegenerationR6 | -0.181 | 4.873 | 0.62487 | 0.88393 | |
| RegenerationBL | -0.543 | 4.873 | 0.26462 | 0.62319 | |
| RegenerationTP | 0.401 | 4.873 | 0.42321 | 0.84673 |
Genes with expression patterns similar to MligTC455_45955
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_45955 | 1216 | 25.33 | Mlig455_018256 | Neo: - Age: - Region-enriched R4: 1.790/0.00004 |
PDCD5 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_018256 {REF} {Length: 710} {TRANSSPLICED} {Pfam: Double-stranded DNA-binding domain [PF01984.22, score=92.4]} {Human: ENSG00000105185, PDCD5, programmed cell death 5, [RH, Score=92.8, Expect=5e-25]} {Mouse: ENSMUSG00000030417, Pdcd5, programmed cell death 5, [RH, Score=93.2, Expect=3e-25]} {Dmel: FBgn0036580, PDCD-5, Programmed Cell Death 5, [RH, Score=94.7, Expect=6e-26]} {Celegans: WBGene00008398, D2005.3, [RH, Score=85.5, Expect=2e-22]} {Smed: dd_Smed_v6_2989_0_1, dd_Smed_v6_2989_0_1, [RH, Score=89.0, Expect=4e-24]} {RNA1509_10095, RNA1509_57466} {RNA1310_49699, RNA1509_10095, RNA1509_57466} {RNA1509_10095, RNA1509_57466, RNA815_22842.2} |
| 2. | MligTC455_02981 | 502 | 10.46 | Mlig455_021254 | Neo: - Age: - Region-enriched R5: 1.023/0.01867 |
MRPL55 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_021254 {REF} {Length: 901} {TRANSSPLICED} {Pfam: Mitochondrial ribosomal protein L55 [PF09776.11, score=84.4]} {Human: ENSG00000162910, MRPL55, mitochondrial ribosomal protein L55, [RH, Score=63.5, Expect=2e-13]} {Mouse: ENSMUSG00000036860, Mrpl55, mitochondrial ribosomal protein L55, [RH, Score=63.2, Expect=2e-13]} {Dmel: FBgn0038678, mRpL55, mitochondrial ribosomal protein L55, [RH, Score=68.6, Expect=7e-16]} {Celegans: WBGene00022045, mrpl-55, Mitochondrial Ribosomal Protein, Large, [RH, Score=69.7, Expect=3e-16]} {Smed: dd_Smed_v6_4982_0_1, dd_Smed_v6_4982_0_1, [RH, Score=55.1, Expect=9e-11]} {RNA1509_8283} {RNA1310_15061, RNA1509_8283} {RNA1509_8283, RNA815_18521} |
| 3. | MligTC455_02982 | 496 | 10.34 | Mlig455_021516 | Neo: Int S/G2/M Age: Down-Up-Up |
MRPL55 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_021516 {REF} {Length: 892} {TRANSSPLICED} {Pfam: Mitochondrial ribosomal protein L55 [PF09776.11, score=84.4]} {Human: ENSG00000162910, MRPL55, mitochondrial ribosomal protein L55, [RH, Score=63.2, Expect=3e-13]} {Mouse: ENSMUSG00000036860, Mrpl55, mitochondrial ribosomal protein L55, [RH, Score=62.8, Expect=2e-13]} {Dmel: FBgn0038678, mRpL55, mitochondrial ribosomal protein L55, [RH, Score=68.2, Expect=8e-16]} {Celegans: WBGene00022045, mrpl-55, Mitochondrial Ribosomal Protein, Large, [RH, Score=69.7, Expect=3e-16]} {Smed: dd_Smed_v6_4982_0_1, dd_Smed_v6_4982_0_1, [RH, Score=54.7, Expect=1e-10]} {RNA1509_8283} {RNA1310_15061} {RNA815_18521} |
Berezikov Lab - 2020-2021 © ERIBA