TomoSeq data search

Data search

Results for MligTC455_45957

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_45957

937

19.53

Mlig455_008401, Mlig455_008418

Neo: -

Age: -

YOD1

Mlig455_008401 {REF} {Length: 1801} {TRANSSPLICED} {Pfam: OTU-like cysteine protease [PF02338.21, score=26.8]} {Human: ENSG00000180667, YOD1, YOD1 deubiquitinase, [RH, Score=194, Expect=6e-59]} {Mouse: ENSMUSG00000046404, Yod1, YOD1 deubiquitinase, [RH, Score=191, Expect=3e-58]} {Dmel: FBgn0035593, CG4603, [RH, Score=212, Expect=3e-66]} {Smed: dd_Smed_v6_6696_0_1, dd_Smed_v6_6696_0_1, [RH, Score=197, Expect=1e-60]} {RNA1509_30029} {RNA1310_16814} {RNA815_6871}

Mlig455_008418 {REF} {Length: 1801} {TRANSSPLICED} {Pfam: OTU-like cysteine protease [PF02338.21, score=26.8]} {Human: ENSG00000180667, YOD1, YOD1 deubiquitinase, [RH, Score=194, Expect=6e-59]} {Mouse: ENSMUSG00000046404, Yod1, YOD1 deubiquitinase, [RH, Score=191, Expect=3e-58]} {Dmel: FBgn0035593, CG4603, [RH, Score=212, Expect=3e-66]} {Smed: dd_Smed_v6_6696_0_1, dd_Smed_v6_6696_0_1, [RH, Score=197, Expect=1e-60]} {RNA1509_24433, RNA1509_30029} {RNA1310_16814, RNA1509_24433} {RNA1509_24433, RNA815_6871}

Cumulative graph for MligTC455_45957

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.183	4.695	0.84418	1.00000
RegionR2	-0.131	4.695	0.79919	1.00000
RegionR3	0.466	4.695	0.26475	0.80946
RegionR4	0.706	4.695	0.15138	0.40214
RegionR5	0.48	4.695	0.19906	0.48878
RegionR6	0.415	4.695	0.31438	0.90289
RegionR7	-0.658	4.695	0.21209	0.82753
RegionR8	-1.461	4.695	0.03327	0.35809

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.035	4.695	0.07915	0.77084
RegenerationR2	0.392	4.695	0.41989	0.82734
RegenerationR3	-0.39	4.695	0.44426	0.82966
RegenerationR4	-0.57	4.695	0.28745	0.73217
RegenerationR5	-0.081	4.695	0.86663	1.00000
RegenerationR6	0.274	4.695	0.57879	0.85717
RegenerationBL	0.571	4.695	0.32168	0.68866
RegenerationTP	-0.05	4.695	0.94071	1.00000

Genes with expression patterns similar to MligTC455_45957

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_45957	937	19.53	Mlig455_008401, Mlig455_008418	Neo: - Age: -	YOD1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_008401 {REF} {Length: 1801} {TRANSSPLICED} {Pfam: OTU-like cysteine protease [PF02338.21, score=26.8]} {Human: ENSG00000180667, YOD1, YOD1 deubiquitinase, [RH, Score=194, Expect=6e-59]} {Mouse: ENSMUSG00000046404, Yod1, YOD1 deubiquitinase, [RH, Score=191, Expect=3e-58]} {Dmel: FBgn0035593, CG4603, [RH, Score=212, Expect=3e-66]} {Smed: dd_Smed_v6_6696_0_1, dd_Smed_v6_6696_0_1, [RH, Score=197, Expect=1e-60]} {RNA1509_30029} {RNA1310_16814} {RNA815_6871} Mlig455_008418 {REF} {Length: 1801} {TRANSSPLICED} {Pfam: OTU-like cysteine protease [PF02338.21, score=26.8]} {Human: ENSG00000180667, YOD1, YOD1 deubiquitinase, [RH, Score=194, Expect=6e-59]} {Mouse: ENSMUSG00000046404, Yod1, YOD1 deubiquitinase, [RH, Score=191, Expect=3e-58]} {Dmel: FBgn0035593, CG4603, [RH, Score=212, Expect=3e-66]} {Smed: dd_Smed_v6_6696_0_1, dd_Smed_v6_6696_0_1, [RH, Score=197, Expect=1e-60]} {RNA1509_24433, RNA1509_30029} {RNA1310_16814, RNA1509_24433} {RNA1509_24433, RNA815_6871}
2.	MligTC455_48503	1623	33.8	Mlig455_038159, Mlig455_038264	Neo: - Age: -	ERCC2	1.819	-	-	-	0.956	-	0.863	Mlig455_038159 {REF} {Length: 2889} {Pfam: DEAD_2 [PF06733.17, score=158.5]; Helicase C-terminal domain [PF13307.8, score=148.2]; Helical and beta-bridge domain [PF06777.13, score=128.6]; Type III restriction enzyme, res subunit [PF04851.17, score=24.7]; DEAD/DEAH box helicase [PF00270.31, score=20.9]} {Human: ENSG00000104884, ERCC2, ERCC excision repair 2, TFIIH core complex helicase subunit, [RH, Score=1053, Expect=0.0]} {Mouse: ENSMUSG00000030400, Ercc2, excision repair cross-complementing rodent repair deficiency, complementation group 2, [RH, Score=1048, Expect=0.0]} {Dmel: FBgn0261850, Xpd, Xeroderma pigmentosum D, [RH, Score=1044, Expect=0.0]} {Celegans: WBGene00021752, xpd-1, XPD (Xeroderma Pigmentosum complementation group D) related, [RH, Score=754, Expect=0.0]} {Smed: dd_Smed_v6_8198_0_2, dd_Smed_v6_8198_0_2, [RH, Score=936, Expect=0.0]} {RNA1509_4106, RNA1509_53512} {RNA1310_4020.2, RNA1509_53512} {RNA1509_53512, RNA815_1351.1} Mlig455_038264 {REF} {Length: 2889} {Pfam: DEAD_2 [PF06733.17, score=158.5]; Helicase C-terminal domain [PF13307.8, score=148.2]; Helical and beta-bridge domain [PF06777.13, score=128.6]; Type III restriction enzyme, res subunit [PF04851.17, score=24.7]; DEAD/DEAH box helicase [PF00270.31, score=20.9]} {Human: ENSG00000104884, ERCC2, ERCC excision repair 2, TFIIH core complex helicase subunit, [RH, Score=1053, Expect=0.0]} {Mouse: ENSMUSG00000030400, Ercc2, excision repair cross-complementing rodent repair deficiency, complementation group 2, [RH, Score=1048, Expect=0.0]} {Dmel: FBgn0261850, Xpd, Xeroderma pigmentosum D, [RH, Score=1044, Expect=0.0]} {Celegans: WBGene00021752, xpd-1, XPD (Xeroderma Pigmentosum complementation group D) related, [RH, Score=754, Expect=0.0]} {Smed: dd_Smed_v6_8198_0_2, dd_Smed_v6_8198_0_2, [RH, Score=936, Expect=0.0]} {RNA1509_4106} {RNA1310_4020.2, RNA1509_4106} {RNA1509_4106, RNA815_1351.1}
3.	MligTC455_23531	1051	21.9	Mlig455_008940	Neo: - Age: -	PYCR2	1.734	-	-	-	0.776	-	0.958	Mlig455_008940 {REF} {Length: 1238} {TRANSSPLICED} {Pfam: Pyrroline-5-carboxylate reductase dimerisation [PF14748.8, score=131.4]; NADP oxidoreductase coenzyme F420-dependent [PF03807.19, score=79.6]; NAD binding domain of 6-phosphogluconate dehydrogenase [PF03446.17, score=22.8]; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus [PF01210.25, score=21.7]; Ornithine cyclodeaminase/mu-crystallin family [PF02423.17, score=19.5]; Rossmann-like domain [PF10727.11, score=19.5]; Shikimate / quinate 5-dehydrogenase [PF01488.22, score=19.0]} {Human: ENSG00000143811, PYCR2, pyrroline-5-carboxylate reductase 2, [RH, Score=235, Expect=1e-75]; ENSG00000183010, PYCR1, pyrroline-5-carboxylate reductase 1, [RH, Score=232, Expect=1e-74]} {Mouse: ENSMUSG00000025140, Pycr1, pyrroline-5-carboxylate reductase 1, [RH, Score=232, Expect=1e-74]; ENSMUSG00000026520, Pycr2, pyrroline-5-carboxylate reductase family, member 2, [RH, Score=228, Expect=3e-73]} {Dmel: FBgn0038516, P5cr-2, Pyrroline-5-carboxylate reductase-like 2, [RH, Score=221, Expect=4e-71]} {Celegans: WBGene00010924, M153.1, [RH, Score=223, Expect=5e-72]} {Smed: dd_Smed_v6_3217_0_2, dd_Smed_v6_3217_0_2, [RH, Score=168, Expect=9e-51]} {RNA1509_5212} {RNA1310_10890} {RNA815_11280.1}
4.	MligTC455_20067	1162	24.2	Mlig455_012609	Neo: Neoblast Age: Down-Up-Up, logFC(26M/2M)=0.366 Region-enriched R5: 1.597/0.00014	TIMM29	1.733	-	-	0.757	-	-	0.976	Mlig455_012609 {REF} {Length: 788} {TRANSSPLICED} {Pfam: Translocase of the Inner Mitochondrial membrane 29 [PF10171.11, score=123.8]} {Human: ENSG00000142444, TIMM29, translocase of inner mitochondrial membrane 29, [RH, Score=84.7, Expect=2e-19]} {Mouse: ENSMUSG00000048429, Timm29, translocase of inner mitochondrial membrane 29, [RH, Score=66.6, Expect=6e-13]} {Dmel: FBgn0029665, CG14270, [RH, Score=50.4, Expect=1e-07]} {RNA1509_10312, RNA1509_52235, RNA1509_57549} {RNA1310_47867.1, RNA1509_10312, RNA1509_52235, RNA1509_57549} {RNA1509_10312, RNA1509_52235, RNA1509_57549, RNA815_24074}
5.	MligTC455_13767	1016	21.17	Mlig455_033223	Neo: - Age: Up-Down-Up		1.721	0.760	-	-	-	-	0.961	Mlig455_033223 {REF} {Length: 593} {TRANSSPLICED} {Pfam: NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial [PF15880.7, score=50.0]} {RNA1509_14022} {RNA1310_58176.1} {RNA815_30529}
6.	MligTC455_39028	780	16.26	Mlig455_056783	Neo: - Age: -	AIFM3	0.97	-	-	-	-	-	0.970	Mlig455_056783 {REF} {Length: 3601} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=132.4]; Rieske [2Fe-2S] domain [PF00355.28, score=53.3]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=49.4]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=23.2]; Rieske-like [2Fe-2S] domain [PF13806.8, score=19.3]; Putative NAD(P)-binding [PF13241.8, score=19.1]} {Human: ENSG00000183773, AIFM3, apoptosis inducing factor, mitochondria associated 3, [RH, Score=268, Expect=2e-81]} {Mouse: ENSMUSG00000022763, Aifm3, apoptosis-inducing factor, mitochondrion-associated 3, [RH, Score=270, Expect=2e-82]} {Dmel: FBgn0025628, CG4199, [RH, Score=270, Expect=1e-82]} {Celegans: WBGene00017640, F20D6.11, [RH, Score=224, Expect=7e-66]} {RNA1509_16919} {RNA1310_15591.2, RNA1509_16919} {RNA1509_16919, RNA815_2718.1}
7.	MligTC455_43966	972	20.25	Mlig455_070780	Neo: Int S/G2/M Age: -	EMC10	0.952	-	-	-	-	-	0.952	Mlig455_070780 {REF} {Length: 876} {TRANSSPLICED} {Human: ENSG00000161671, EMC10, ER membrane protein complex subunit 10, [RH, Score=75.5, Expect=1e-15]} {Mouse: ENSMUSG00000008140, Emc10, ER membrane protein complex subunit 10, [RH, Score=79.0, Expect=2e-17]} {Dmel: FBgn0052441, CG32441, [RH, Score=64.7, Expect=1e-12]} {Celegans: WBGene00012829, Y43F8C.7, [RH, Score=62.4, Expect=8e-12]} {Smed: dd_Smed_v6_2594_0_1, dd_Smed_v6_2594_0_1, [RH, Score=89.7, Expect=5e-22]} {RNA1509_27493, RNA1509_41782} {RNA1310_9560, RNA1509_41782} {RNA1509_41782, RNA815_13374}
8.	MligTC455_15792	1047	21.82	Mlig455_045622	Neo: Int S/G2/M Age: Up-Down-Down Region-enriched R4: 1.536/0.00274	MTRF1L	0.95	-	-	-	-	-	0.950	Mlig455_045622 {REF} {Length: 1809} {Pfam: PCRF domain [PF03462.20, score=107.8]; RF-1 domain [PF00472.22, score=105.7]} {Human: ENSG00000112031, MTRF1L, mitochondrial translational release factor 1 like, [RH, Score=189, Expect=2e-54]} {Mouse: ENSMUSG00000019774, Mtrf1l, mitochondrial translational release factor 1-like, [RH, Score=189, Expect=2e-54]} {Dmel: FBgn0032486, mRF1, mitochondrial translation release factor 1, [RH, Score=177, Expect=4e-50]} {Celegans: WBGene00020993, W03F8.3, Probable peptide chain release factor 1, mitochondrial, [RH, Score=162, Expect=1e-44]} {Smed: dd_Smed_v6_9336_0_1, dd_Smed_v6_9336_0_1, [Score=163, Expect=9e-45]} {RNA1509_31629} {RNA1310_19164} {RNA815_8304.1}

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