Data search
Results for MligTC455_45960
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_45960 | 389 | 8.10 | Mlig455_013557, Mlig455_013610 | Neo: - Age: - |
Mlig455_013557 {REF} {Length: 1332} {TRANSSPLICED} {Pfam: 2'-5' RNA ligase superfamily [PF13563.8, score=111.9]; LigT like Phosphoesterase [PF02834.18, score=22.5]} {RNA1509_30733} {RNA1310_32465} {RNA815_18504} Mlig455_013610 {REF} {Length: 1338} {TRANSSPLICED} {Pfam: 2'-5' RNA ligase superfamily [PF13563.8, score=108.1]; LigT like Phosphoesterase [PF02834.18, score=23.2]} {RNA1509_30733} {RNA1310_32465, RNA1509_30733} {RNA1509_30733, RNA815_18504} |
Cumulative graph for MligTC455_45960
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.762 | 3.494 | 0.20381 | 0.84309 | |
| RegionR2 | 0.528 | 3.494 | 0.33339 | 0.72513 | |
| RegionR3 | 0.51 | 3.494 | 0.20313 | 0.74332 | |
| RegionR4 | -0.232 | 3.494 | 0.64185 | 0.94713 | |
| RegionR5 | 0.323 | 3.494 | 0.38191 | 0.73646 | |
| RegionR6 | -0.163 | 3.494 | 0.71922 | 1.00000 | |
| RegionR7 | -0.343 | 3.494 | 0.58830 | 1.00000 | |
| RegionR8 | 1.139 | 3.494 | 0.06297 | 0.48785 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.231 | 3.494 | 0.47726 | 1.00000 | |
| RegenerationR2 | 0.645 | 3.494 | 0.12095 | 0.54058 | |
| RegenerationR3 | -0.288 | 3.494 | 0.54865 | 0.88293 | |
| RegenerationR4 | -0.342 | 3.494 | 0.49083 | 0.86515 | |
| RegenerationR5 | 0.257 | 3.494 | 0.52443 | 0.87179 | |
| RegenerationR6 | -0.943 | 3.494 | 0.11073 | 0.41035 | |
| RegenerationBL | -1.238 | 3.494 | 0.13629 | 0.43982 | |
| RegenerationTP | 0.465 | 3.494 | 0.44833 | 0.86608 |
Genes with expression patterns similar to MligTC455_45960
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_45960 | 389 | 8.1 | Mlig455_013557, Mlig455_013610 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_013557 {REF} {Length: 1332} {TRANSSPLICED} {Pfam: 2'-5' RNA ligase superfamily [PF13563.8, score=111.9]; LigT like Phosphoesterase [PF02834.18, score=22.5]} {RNA1509_30733} {RNA1310_32465} {RNA815_18504} Mlig455_013610 {REF} {Length: 1338} {TRANSSPLICED} {Pfam: 2'-5' RNA ligase superfamily [PF13563.8, score=108.1]; LigT like Phosphoesterase [PF02834.18, score=23.2]} {RNA1509_30733} {RNA1310_32465, RNA1509_30733} {RNA1509_30733, RNA815_18504} |
|
| 2. | MligTC455_50847 | 85 | 1.77 | Mlig455_063467 | Neo: - Age: - |
MPEG1 | 0.964 | - | - | - | 0.964 | - | - | Mlig455_063467 {REF} {Length: 3032} {Human: ENSG00000197629, MPEG1, macrophage expressed 1, [Score=63.9, Expect=1e-11]} {Mouse: ENSMUSG00000046805, Mpeg1, macrophage expressed gene 1, [Score=67.8, Expect=4e-13]} {Smed: dd_Smed_v6_12605_0_1, dd_Smed_v6_12605_0_1, [Score=50.8, Expect=8e-08]} {RNA1310_21221} {RNA815_6129.1} |
| 3. | MligTC455_25550 | 101 | 2.11 | Mlig455_022559 | Neo: - Age: Down-Up-Down |
0.961 | - | - | - | - | - | 0.961 | Mlig455_022559 {REF} {Length: 3475} {TRANSSPLICED} {Pfam: Double zinc ribbon [PF12773.9, score=18.9]} {RNA1509_58898} {RNA1310_19071} {RNA815_18874} | |
| 4. | MligTC455_36643 | 194 | 4.04 | Mlig455_041343 | Neo: - Age: Up-Down-Up |
0.95 | - | - | - | 0.950 | - | - | Mlig455_041343 {REF} {Length: 847} {RNA1509_40031} {RNA1310_41959.1} {RNA815_19701} |
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