Data search
Results for MligTC455_45961
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_45961 | 333 | 6.93 | Mlig455_031646 | Neo: - Age: logFC(26M/2M)=0.237 |
HNRNPL | Mlig455_031646 {REF} {Length: 2380} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=97.0]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=60.2]; Limkain b1 [PF11608.10, score=25.9]; Occluded RNA-recognition motif [PF16842.7, score=19.8]} {Human: ENSG00000104824, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=177, Expect=4e-48]; ENSG00000282947, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=177, Expect=4e-48]} {Mouse: ENSMUSG00000015165, Hnrnpl, heterogeneous nuclear ribonucleoprotein L, [Score=176, Expect=2e-47]} {Dmel: FBgn0003435, sm, smooth, [Score=144, Expect=7e-37]} {Celegans: WBGene00016624, C44B7.2, [Score=150, Expect=1e-38]} {Smed: dd_Smed_v6_1327_0_1, dd_Smed_v6_1327_0_1, [Score=171, Expect=2e-46]} {RNA1509_38754} {RNA1310_4062, RNA1509_38754} {RNA1509_38754, RNA815_2692.1} |
Cumulative graph for MligTC455_45961
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.957 | 3.279 | 0.51622 | 1.00000 | |
| RegionR2 | 0.447 | 3.279 | 0.41541 | 0.80862 | |
| RegionR3 | -0.22 | 3.279 | 0.60129 | 1.00000 | |
| RegionR4 | 0.137 | 3.279 | 0.79647 | 1.00000 | |
| RegionR5 | -0.316 | 3.279 | 0.40792 | 0.76650 | |
| RegionR6 | -0.095 | 3.279 | 0.82533 | 1.00000 | |
| RegionR7 | 0.459 | 3.279 | 0.41048 | 1.00000 | |
| RegionR8 | 0.545 | 3.279 | 0.41993 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.727 | 3.279 | 0.41040 | 1.00000 | |
| RegenerationR2 | -0.236 | 3.279 | 0.58014 | 0.90705 | |
| RegenerationR3 | -0.417 | 3.279 | 0.39943 | 0.80215 | |
| RegenerationR4 | -1.308 | 3.279 | 0.00992 | 0.15055 | |
| RegenerationR5 | -0.652 | 3.279 | 0.14240 | 0.55647 | |
| RegenerationR6 | 0.125 | 3.279 | 0.79520 | 0.97469 | |
| RegenerationBL | 0.542 | 3.279 | 0.36099 | 0.72986 | |
| RegenerationTP | -1.547 | 3.279 | 0.04370 | 0.34694 |
Genes with expression patterns similar to MligTC455_45961
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_45961 | 333 | 6.93 | Mlig455_031646 | Neo: - Age: logFC(26M/2M)=0.237 |
HNRNPL | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_031646 {REF} {Length: 2380} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=97.0]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=60.2]; Limkain b1 [PF11608.10, score=25.9]; Occluded RNA-recognition motif [PF16842.7, score=19.8]} {Human: ENSG00000104824, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=177, Expect=4e-48]; ENSG00000282947, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=177, Expect=4e-48]} {Mouse: ENSMUSG00000015165, Hnrnpl, heterogeneous nuclear ribonucleoprotein L, [Score=176, Expect=2e-47]} {Dmel: FBgn0003435, sm, smooth, [Score=144, Expect=7e-37]} {Celegans: WBGene00016624, C44B7.2, [Score=150, Expect=1e-38]} {Smed: dd_Smed_v6_1327_0_1, dd_Smed_v6_1327_0_1, [Score=171, Expect=2e-46]} {RNA1509_38754} {RNA1310_4062, RNA1509_38754} {RNA1509_38754, RNA815_2692.1} |
| 2. | MligTC455_30272 | 339 | 7.06 | Mlig455_003363, Mlig455_042254, Mlig455_062169 | Neo: - Age: Up-Up-Down |
0.957 | - | - | - | 0.957 | - | - | Mlig455_003363 {REF} {Length: 1628} {Celegans: WBGene00016348, C33E10.6, [RH, Score=272, Expect=9e-81]} {Smed: dd_Smed_v6_9974_1_7, dd_Smed_v6_9974_1_7, [Score=253, Expect=6e-77]} {RNA1509_5039} {RNA1310_3396.1} {RNA815_1342.1} Mlig455_042254 {REF} {Length: 322} {Celegans: WBGene00022511, ZC53.4, [Score=69.3, Expect=5e-15]} {RNA1509_5039} {RNA1310_3396.1} {RNA815_1342.1} Mlig455_062169 {REF} {Length: 1903} {Pfam: Recombination endonuclease VII [PF02945.17, score=32.1]} {Celegans: WBGene00022511, ZC53.4, [RH, Score=281, Expect=5e-83]} {Smed: dd_Smed_v6_9974_1_5, dd_Smed_v6_9974_1_5, [Score=262, Expect=1e-79]} {RNA1509_19771, RNA1509_5039} {RNA1310_3396.1, RNA1509_19771} {RNA1509_19771, RNA815_1342.1} |
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