Data search


search
Exact
Search

Results for MligTC455_45975

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_45975 4983 103.82 Mlig455_021872, Mlig455_021876

Neo: -

Age: Down-Up-Up

Region-enriched R5: 1.088/0.00016
Region-enriched R4: 1.024/0.00653

VBP1

Mlig455_021872 {REF} {Length: 1884} {TRANSSPLICED} {Pfam: Prefoldin subunit [PF02996.19, score=115.8]; Syntaxin 6, N-terminal [PF09177.13, score=19.7]; Prefoldin subunit [PF01920.22, score=19.6]} {Human: ENSG00000155959, VBP1, VHL binding protein 1, [RH, Score=160, Expect=9e-50]} {Mouse: ENSMUSG00000031197, Vbp1, von Hippel-Lindau binding protein 1, [RH, Score=160, Expect=7e-50]} {Dmel: FBgn0264694, mgr, merry-go-round, [RH, Score=139, Expect=1e-41]} {Celegans: WBGene00006889, pfd-3, Probable prefoldin subunit 3, [RH, Score=133, Expect=2e-39]} {Smed: dd_Smed_v6_3319_0_1, dd_Smed_v6_3319_0_1, [RH, Score=141, Expect=9e-43]} {RNA1509_1872, RNA1509_47875, RNA1509_7666} {RNA1310_29569, RNA1509_1872, RNA1509_47875, RNA1509_7666} {RNA1509_1872, RNA1509_47875, RNA1509_7666, RNA815_15367}

Mlig455_021876 {REF} {Length: 1041} {TRANSSPLICED} {Pfam: Prefoldin subunit [PF02996.19, score=115.8]; Syntaxin 6, N-terminal [PF09177.13, score=19.7]; Prefoldin subunit [PF01920.22, score=19.6]} {Human: ENSG00000155959, VBP1, VHL binding protein 1, [RH, Score=160, Expect=9e-50]} {Mouse: ENSMUSG00000031197, Vbp1, von Hippel-Lindau binding protein 1, [RH, Score=160, Expect=7e-50]} {Dmel: FBgn0264694, mgr, merry-go-round, [RH, Score=139, Expect=1e-41]} {Celegans: WBGene00006889, pfd-3, Probable prefoldin subunit 3, [RH, Score=133, Expect=2e-39]} {Smed: dd_Smed_v6_3319_0_1, dd_Smed_v6_3319_0_1, [RH, Score=141, Expect=9e-43]} {RNA1509_47875} {RNA1310_29569} {RNA815_15367}

Cumulative graph for MligTC455_45975

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.715 6.829 0.00276 0.16797
RegionR2 -0.284 6.829 0.37218 0.76695
RegionR3 0.235 6.829 0.36703 0.90224
RegionR4 1.024 6.829 0.00055 0.00653
RegionR5 1.088 6.829 0.00001 0.00016
RegionR6 0.552 6.829 0.03243 0.33463
RegionR7 0.035 6.829 0.90217 1.00000
RegionR8 -0.934 6.829 0.01075 0.19627

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.307 6.829 0.68996 1.00000
RegenerationR2 -0.03 6.829 0.92307 1.00000
RegenerationR3 -0.035 6.829 0.91426 1.00000
RegenerationR4 -0.074 6.829 0.82538 0.99582
RegenerationR5 -0.369 6.829 0.23511 0.66891
RegenerationR6 0.289 6.829 0.36057 0.70478
RegenerationBL 0.528 6.829 0.07273 0.31431
RegenerationTP 0.46 6.829 0.16786 0.60007


Genes with expression patterns similar to MligTC455_45975

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_45975 4983 103.82 Mlig455_021872, Mlig455_021876

Neo: -

Age: Down-Up-Up

Region-enriched R5: 1.088/0.00016
Region-enriched R4: 1.024/0.00653

VBP1 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_021872 {REF} {Length: 1884} {TRANSSPLICED} {Pfam: Prefoldin subunit [PF02996.19, score=115.8]; Syntaxin 6, N-terminal [PF09177.13, score=19.7]; Prefoldin subunit [PF01920.22, score=19.6]} {Human: ENSG00000155959, VBP1, VHL binding protein 1, [RH, Score=160, Expect=9e-50]} {Mouse: ENSMUSG00000031197, Vbp1, von Hippel-Lindau binding protein 1, [RH, Score=160, Expect=7e-50]} {Dmel: FBgn0264694, mgr, merry-go-round, [RH, Score=139, Expect=1e-41]} {Celegans: WBGene00006889, pfd-3, Probable prefoldin subunit 3, [RH, Score=133, Expect=2e-39]} {Smed: dd_Smed_v6_3319_0_1, dd_Smed_v6_3319_0_1, [RH, Score=141, Expect=9e-43]} {RNA1509_1872, RNA1509_47875, RNA1509_7666} {RNA1310_29569, RNA1509_1872, RNA1509_47875, RNA1509_7666} {RNA1509_1872, RNA1509_47875, RNA1509_7666, RNA815_15367}

Mlig455_021876 {REF} {Length: 1041} {TRANSSPLICED} {Pfam: Prefoldin subunit [PF02996.19, score=115.8]; Syntaxin 6, N-terminal [PF09177.13, score=19.7]; Prefoldin subunit [PF01920.22, score=19.6]} {Human: ENSG00000155959, VBP1, VHL binding protein 1, [RH, Score=160, Expect=9e-50]} {Mouse: ENSMUSG00000031197, Vbp1, von Hippel-Lindau binding protein 1, [RH, Score=160, Expect=7e-50]} {Dmel: FBgn0264694, mgr, merry-go-round, [RH, Score=139, Expect=1e-41]} {Celegans: WBGene00006889, pfd-3, Probable prefoldin subunit 3, [RH, Score=133, Expect=2e-39]} {Smed: dd_Smed_v6_3319_0_1, dd_Smed_v6_3319_0_1, [RH, Score=141, Expect=9e-43]} {RNA1509_47875} {RNA1310_29569} {RNA815_15367}
2. MligTC455_47969 1640 34.16 Mlig455_036234

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.600

Region-enriched R5: 1.638/0.00000
Region-enriched R4: 1.137/0.01951

NMT2 2.522 - 0.838 0.727 0.957 - - Mlig455_036234 {REF} {Length: 1943} {TRANSSPLICED} {Pfam: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain [PF01233.21, score=252.7]; Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain [PF02799.17, score=233.5]; Acetyltransferase (GNAT) domain [PF13527.9, score=20.6]; Acetyltransferase (GNAT) family [PF00583.27, score=19.6]} {Human: ENSG00000152465, NMT2, N-myristoyltransferase 2, [RH, Score=510, Expect=1e-178]; ENSG00000136448, NMT1, N-myristoyltransferase 1, [RH, Score=501, Expect=5e-175]} {Mouse: ENSMUSG00000026643, Nmt2, N-myristoyltransferase 2, [RH, Score=514, Expect=2e-180]; ENSMUSG00000020936, Nmt1, N-myristoyltransferase 1, [RH, Score=503, Expect=6e-176]} {Dmel: FBgn0020392, Nmt, N-myristoyl transferase, [RH, Score=505, Expect=3e-177]} {Celegans: WBGene00020549, nmt-1, Probable glycylpeptide N-tetradecanoyltransferase, [RH, Score=455, Expect=3e-158]} {Smed: dd_Smed_v6_1145_0_1, dd_Smed_v6_1145_0_1, [RH, Score=489, Expect=1e-171]} {RNA1509_16947, RNA1509_27240, RNA1509_5138} {RNA1310_13485.1, RNA1509_16947, RNA1509_27240} {RNA1509_16947, RNA1509_27240, RNA815_5317}
3. MligTC455_43816 875 18.23 Mlig455_047962

Neo: Int S/G2/M

Age: -

CDC73 2.504 0.792 - 0.762 0.950 - - Mlig455_047962 {REF} {Length: 2631} {Pfam: Paf1 complex subunit CDC73 N-terminal [PF16050.7, score=263.8]; RNA pol II accessory factor, Cdc73 family, C-terminal [PF05179.16, score=159.4]} {Human: ENSG00000134371, CDC73, cell division cycle 73, [RH, Score=296, Expect=5e-92]} {Mouse: ENSMUSG00000026361, Cdc73, cell division cycle 73, Paf1/RNA polymerase II complex component, [RH, Score=296, Expect=3e-92]} {Dmel: FBgn0037657, hyx, hyrax, [RH, Score=280, Expect=4e-86]} {Celegans: WBGene00018064, cdc-73, Cell division cycle protein 73, [RH, Score=145, Expect=3e-37]} {Smed: dd_Smed_v6_3056_0_1, dd_Smed_v6_3056_0_1, [RH, Score=292, Expect=3e-90]} {RNA1509_11097, RNA1509_45243, RNA1509_47783, RNA1509_48317, RNA1509_56989, RNA1509_57062, RNA1509_59183} {RNA1310_6871.1, RNA1509_11097, RNA1509_45243, RNA1509_47783, RNA1509_48317, RNA1509_56989, RNA1509_57062, RNA1509_59183} {RNA1509_11097, RNA1509_45243, RNA1509_47783, RNA1509_48317, RNA1509_56989, RNA1509_57062, RNA1509_59183, RNA815_2766.1}
4. MligTC455_31182 1394 29.04 Mlig455_053151

Neo: -

Age: -

Region-enriched R6: 3.486/0.00001
Region-enriched R5: 3.334/0.00000
Region-enriched R4: 3.071/0.00047
Region-enriched R3: 2.674/0.00253

ANPEP 1.709 - - - - 0.959 0.750 Mlig455_053151 {REF} {Length: 4509} {Pfam: ERAP1-like C-terminal domain [PF11838.10, score=262.3]; Peptidase family M1 domain [PF01433.22, score=247.1]; Peptidase M1 N-terminal domain [PF17900.3, score=145.8]} {Human: ENSG00000166825, ANPEP, alanyl aminopeptidase, membrane, [RH, Score=581, Expect=0.0]} {Mouse: ENSMUSG00000039062, Anpep, alanyl (membrane) aminopeptidase, [RH, Score=574, Expect=0.0]} {Dmel: FBgn0039640, CG14516, [RH, Score=538, Expect=9e-176]} {Celegans: WBGene00011587, T07F10.1, Aminopeptidase, [RH, Score=436, Expect=8e-137]} {Smed: dd_Smed_v6_6470_0_1, dd_Smed_v6_6470_0_1, [RH, Score=639, Expect=0.0]} {RNA1509_13872, RNA1509_1573, RNA1509_32492} {RNA1310_1662.1, RNA1509_13872, RNA1509_32492} {RNA1509_13872, RNA1509_32492, RNA815_486.1}
5. MligTC455_42549 825 17.18 Mlig455_057020

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.473

Region-specific R5: 2.261

Region-enriched R5: 1.949/0.00000

1.68 - 0.954 - 0.726 - - Mlig455_057020 {REF} {Length: 1622} {TRANSSPLICED} {Pfam: Urb2/Npa2 family [PF10441.11, score=24.2]} {RNA1509_13931} {RNA1310_18688.1, RNA1509_13931} {RNA1509_13931, RNA815_25561}
6. MligTC455_43535 5822 121.29 Mlig455_025114

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.664

Region-enriched R5: 1.507/0.00005
Region-enriched R4: 1.394/0.00195

PAPSS2 0.951 - - - - 0.951 - Mlig455_025114 {REF} {Length: 4910} {Pfam: Adenylylsulphate kinase [PF01583.22, score=241.9]; ATP-sulfurylase [PF01747.19, score=233.5]; PUA-like domain [PF14306.8, score=132.0]; AAA domain [PF13671.8, score=32.0]; AAA domain [PF13238.8, score=21.3]} {Human: ENSG00000198682, PAPSS2, 3'-phosphoadenosine 5'-phosphosulfate synthase 2, [RH, Score=810, Expect=0.0]; ENSG00000138801, PAPSS1, 3'-phosphoadenosine 5'-phosphosulfate synthase 1, [RH, Score=803, Expect=0.0]} {Mouse: ENSMUSG00000024899, Papss2, 3'-phosphoadenosine 5'-phosphosulfate synthase 2, [RH, Score=807, Expect=0.0]; ENSMUSG00000028032, Papss1, 3'-phosphoadenosine 5'-phosphosulfate synthase 1, [RH, Score=805, Expect=0.0]} {Dmel: FBgn0020389, Papss, PAPS synthetase, [RH, Score=777, Expect=0.0]} {Celegans: WBGene00004091, pps-1, 3'-Phosphoadenosine 5'-Phosphosulfate Synthetase, [RH, Score=709, Expect=0.0]} {Smed: dd_Smed_v6_2536_0_1, dd_Smed_v6_2536_0_1, [RH, Score=766, Expect=0.0]} {RNA1509_11572, RNA1509_14633, RNA1509_31280, RNA1509_49104, RNA1509_59659} {RNA1310_5399, RNA1509_11572, RNA1509_14633, RNA1509_31280, RNA1509_49104, RNA1509_59659} {RNA1509_11572, RNA1509_14633, RNA1509_31280, RNA1509_49104, RNA1509_59659, RNA815_4222.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA