Data search


search
Exact
Search

Results for MligTC455_46055

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_46055 457 9.53 Mlig455_049260

Neo: -

Age: -

TNS3 Mlig455_049260 {REF} {Length: 6138} {Pfam: Phosphotyrosine-binding domain [PF08416.15, score=63.4]; SH2 domain [PF00017.26, score=42.4]} {Human: ENSG00000136205, TNS3, tensin 3, [RH, Score=266, Expect=2e-72]; ENSG00000079308, TNS1, tensin 1, [RH, Score=266, Expect=1e-72]} {Mouse: ENSMUSG00000020422, Tns3, tensin 3, [RH, Score=267, Expect=5e-73]; ENSMUSG00000055322, Tns1, tensin 1, [RH, Score=263, Expect=1e-75]} {Dmel: FBgn0000244, by, blistery, [RH, Score=217, Expect=7e-59]} {Celegans: WBGene00006508, tns-1, TeNSin homolog, [RH, Score=267, Expect=1e-74]} {Smed: dd_Smed_v6_4454_0_2, dd_Smed_v6_4454_0_2, [RH, Score=231, Expect=5e-64]} {RNA1509_4271} {RNA1310_1424} {RNA815_971}

Cumulative graph for MligTC455_46055

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.042 3.519 0.98108 1.00000
RegionR2 -0.6 3.519 0.34052 0.73268
RegionR3 0.164 3.519 0.74455 1.00000
RegionR4 -0.141 3.519 0.83436 1.00000
RegionR5 -0.936 3.519 0.06361 0.22221
RegionR6 -0.258 3.519 0.60302 1.00000
RegionR7 0.85 3.519 0.12336 0.66196
RegionR8 0.878 3.519 0.16898 0.74161

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.1 3.519 0.96234 1.00000
RegenerationR2 -0.319 3.519 0.55297 0.89500
RegenerationR3 -1.263 3.519 0.03298 0.32418
RegenerationR4 -0.953 3.519 0.13606 0.55604
RegenerationR5 0.045 3.519 0.93580 1.00000
RegenerationR6 -0.436 3.519 0.48486 0.79511
RegenerationBL -0.348 3.519 0.59895 0.94648
RegenerationTP -0.84 3.519 0.22119 0.66478


Genes with expression patterns similar to MligTC455_46055

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_46055 457 9.53 Mlig455_049260

Neo: -

Age: -

TNS3 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_049260 {REF} {Length: 6138} {Pfam: Phosphotyrosine-binding domain [PF08416.15, score=63.4]; SH2 domain [PF00017.26, score=42.4]} {Human: ENSG00000136205, TNS3, tensin 3, [RH, Score=266, Expect=2e-72]; ENSG00000079308, TNS1, tensin 1, [RH, Score=266, Expect=1e-72]} {Mouse: ENSMUSG00000020422, Tns3, tensin 3, [RH, Score=267, Expect=5e-73]; ENSMUSG00000055322, Tns1, tensin 1, [RH, Score=263, Expect=1e-75]} {Dmel: FBgn0000244, by, blistery, [RH, Score=217, Expect=7e-59]} {Celegans: WBGene00006508, tns-1, TeNSin homolog, [RH, Score=267, Expect=1e-74]} {Smed: dd_Smed_v6_4454_0_2, dd_Smed_v6_4454_0_2, [RH, Score=231, Expect=5e-64]} {RNA1509_4271} {RNA1310_1424} {RNA815_971}
2. MligTC455_03543 24 0.5 Mlig455_045915

Neo: -

Age: -

PLPPR5 1.684 - - - 0.954 - 0.730 Mlig455_045915 {REF} {Length: 2319} {Pfam: PAP2 superfamily [PF01569.23, score=50.7]} {Human: ENSG00000117598, PLPPR5, phospholipid phosphatase related 5, [Score=61.6, Expect=9e-10]} {Mouse: ENSMUSG00000063446, Plppr1, phospholipid phosphatase related 1, [Score=67.0, Expect=8e-12]; ENSMUSG00000033342, Plppr5, phospholipid phosphatase related 5, [Score=65.9, Expect=2e-11]} {Dmel: FBgn0016078, wun, wunen, [Score=65.9, Expect=2e-11]} {Celegans: WBGene00008749, F13E6.5, [Score=48.1, Expect=7e-06]} {RNA1310_40583}
3. MligTC455_22975 17 0.35 Mlig455_042631

Neo: -

Age: -

0.975 - - - 0.975 - - Mlig455_042631 {REF} {Length: 653} {NoTransDecoderORF} {RNA1310_129121}
4. MligTC455_19169 241 5.01 Mlig455_010277

Neo: -

Age: Down-Up-Down

0.968 - - - - - 0.968 Mlig455_010277 {REF} {Length: 2226} {Pfam: Zinc-finger double-stranded RNA-binding [PF12171.10, score=23.6]; Zinc-finger of C2H2 type [PF12874.9, score=19.4]} {RNA1509_23976} {RNA1310_15327} {RNA815_15334}
5. MligTC455_34126 686 14.3 Mlig455_062309

Neo: -

Age: Up-Down-Up

MPDZ 0.959 - - - - - 0.959 Mlig455_062309 {REF} {Length: 7429} {Pfam: PDZ domain [PF00595.26, score=195.3]; PDZ domain [PF17820.3, score=100.1]; PDZ domain [PF13180.8, score=86.4]} {Human: ENSG00000107186, MPDZ, multiple PDZ domain crumbs cell polarity complex component, [Score=220, Expect=1e-60]} {Mouse: ENSMUSG00000028402, Mpdz, multiple PDZ domain protein, [Score=224, Expect=2e-61]} {Dmel: FBgn0263289, scrib, scribbled, [Score=105, Expect=5e-23]} {Celegans: WBGene00003404, mpz-1, Multiple PDZ domain protein, [RH, Score=185, Expect=1e-48]} {Smed: dd_Smed_v6_4520_0_1, dd_Smed_v6_4520_0_1, [Score=287, Expect=4e-86]} {RNA1509_21643} {RNA1310_9754, RNA1509_21643} {RNA1509_21643, RNA815_7089}
6. MligTC455_18897 296 6.16 Mlig455_013372

Neo: -

Age: -

Region-enriched R2: 3.633/0.00016

RGS20 0.958 - - - - - 0.958 Mlig455_013372 {REF} {Length: 1310} {TRANSSPLICED} {Pfam: Regulator of G protein signaling domain [PF00615.21, score=122.1]} {Human: ENSG00000147509, RGS20, regulator of G protein signaling 20, [RH, Score=201, Expect=2e-65]; ENSG00000091844, RGS17, regulator of G protein signaling 17, [RH, Score=196, Expect=5e-64]; ENSG00000171700, RGS19, regulator of G protein signaling 19, [RH, Score=194, Expect=3e-63]} {Mouse: ENSMUSG00000002459, Rgs20, regulator of G-protein signaling 20, [RH, Score=199, Expect=5e-65]; ENSMUSG00000019775, Rgs17, regulator of G-protein signaling 17, [RH, Score=198, Expect=8e-65]} {Dmel: FBgn0028743, Dhit, Double hit, [RH, Score=213, Expect=7e-70]} {Celegans: WBGene00004345, rgs-2, Regulator of G-protein signaling rgs-2, [RH, Score=173, Expect=9e-56]} {Smed: dd_Smed_v6_8877_0_1, dd_Smed_v6_8877_0_1, [RH, Score=187, Expect=4e-58]} {RNA1509_49447} {RNA1310_26662, RNA1509_49447} {RNA1509_49447, RNA815_5788}
7. MligTC455_20416 76 1.57 Mlig455_001926

Neo: -

Age: Down-Up-Down

U2AF2 0.955 - - - - - 0.955 Mlig455_001926 {REF} {Length: 1776} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=110.1]; Occluded RNA-recognition motif [PF16842.7, score=24.8]; RNA recognition motif [PF16367.7, score=20.0]} {Human: ENSG00000063244, U2AF2, U2 small nuclear RNA auxiliary factor 2, [RH, Score=511, Expect=2e-178]} {Mouse: ENSMUSG00000030435, U2af2, U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2, [RH, Score=511, Expect=1e-178]} {Dmel: FBgn0005411, U2af50, U2 small nuclear riboprotein auxiliary factor 50, [RH, Score=561, Expect=0.0]} {Celegans: WBGene00006697, uaf-1, Splicing factor U2AF 65 kDa subunit, [RH, Score=448, Expect=8e-154]} {Smed: dd_Smed_v6_3590_0_1, dd_Smed_v6_3590_0_1, [RH, Score=559, Expect=0.0]} {RNA1509_3800} {RNA1310_13147.1} {RNA815_6631}
8. MligTC455_45657 249 5.19 Mlig455_071169

Neo: -

Age: -

FBXO25 0.955 - - - - - 0.955 Mlig455_071169 {REF} {Length: 3566} {TRANSSPLICED} {Human: ENSG00000147364, FBXO25, F-box protein 25, [Score=68.6, Expect=7e-13]} {Mouse: ENSMUSG00000038365, Fbxo25, F-box protein 25, [Score=72.4, Expect=4e-14]} {Dmel: FBgn0036196, CG11658, [Score=87.0, Expect=2e-19]} {Celegans: WBGene00008439, mfb-1, MAFBx (F-box) protein homolog, [Score=73.2, Expect=1e-14]} {Smed: dd_Smed_v6_11888_0_1, dd_Smed_v6_11888_0_1, [Score=105, Expect=2e-26]} {RNA1509_30284} {RNA1310_19890} {RNA815_23446.1}
9. MligTC455_43666 172 3.59 Mlig455_051408

Neo: -

Age: logFC(26M/2M)=-0.352

KY 0.952 - 0.952 - - - - Mlig455_051408 {REF} {Length: 5047} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=111, Expect=2e-24]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=111, Expect=1e-24]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=150, Expect=7e-37]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=139, Expect=1e-34]} {Smed: dd_Smed_v6_5330_0_1, dd_Smed_v6_5330_0_1, [Score=137, Expect=1e-32]} {RNA1509_7582} {RNA1310_2203} {RNA815_6135}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA