Data search


search
Exact
Search

Results for MligTC455_46065

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_46065 5174 107.79 Mlig455_068829

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.438

ADK Mlig455_068829 {REF} {Length: 2062} {TRANSSPLICED} {Pfam: pfkB family carbohydrate kinase [PF00294.26, score=191.6]} {Human: ENSG00000156110, ADK, adenosine kinase, [RH, Score=309, Expect=2e-103]} {Mouse: ENSMUSG00000039197, Adk, adenosine kinase, [RH, Score=308, Expect=4e-103]} {Dmel: FBgn0036337, AdenoK, Adenosine Kinase, [RH, Score=299, Expect=9e-100]} {Celegans: WBGene00011128, R07H5.8, [RH, Score=298, Expect=9e-100]} {Smed: dd_Smed_v6_627_0_1, dd_Smed_v6_627_0_1, [RH, Score=296, Expect=4e-99]} {RNA1509_11913, RNA1509_47996, RNA1509_57209} {RNA1310_11728.1, RNA1509_11913, RNA1509_47996, RNA1509_57209} {RNA1509_11913, RNA1509_47996, RNA1509_57209, RNA815_10419}

Cumulative graph for MligTC455_46065

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.965 6.878 0.07624 0.60841
RegionR2 -0.161 6.878 0.62224 0.96607
RegionR3 0.904 6.878 0.00037 0.01352
RegionR4 -0.27 6.878 0.34815 0.66934
RegionR5 0.754 6.878 0.00143 0.01353
RegionR6 0.669 6.878 0.00935 0.16109
RegionR7 0.148 6.878 0.61761 1.00000
RegionR8 -1.078 6.878 0.00922 0.17974

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.55 6.878 0.43244 1.00000
RegenerationR2 -0.428 6.878 0.18449 0.62702
RegenerationR3 0.337 6.878 0.28004 0.71281
RegenerationR4 0.629 6.878 0.04833 0.35437
RegenerationR5 0.673 6.878 0.03035 0.29179
RegenerationR6 0.592 6.878 0.06033 0.30852
RegenerationBL 0.547 6.878 0.08321 0.33769
RegenerationTP 0.324 6.878 0.37821 0.81333


Genes with expression patterns similar to MligTC455_46065

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_46065 5174 107.79 Mlig455_068829

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.438

ADK 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_068829 {REF} {Length: 2062} {TRANSSPLICED} {Pfam: pfkB family carbohydrate kinase [PF00294.26, score=191.6]} {Human: ENSG00000156110, ADK, adenosine kinase, [RH, Score=309, Expect=2e-103]} {Mouse: ENSMUSG00000039197, Adk, adenosine kinase, [RH, Score=308, Expect=4e-103]} {Dmel: FBgn0036337, AdenoK, Adenosine Kinase, [RH, Score=299, Expect=9e-100]} {Celegans: WBGene00011128, R07H5.8, [RH, Score=298, Expect=9e-100]} {Smed: dd_Smed_v6_627_0_1, dd_Smed_v6_627_0_1, [RH, Score=296, Expect=4e-99]} {RNA1509_11913, RNA1509_47996, RNA1509_57209} {RNA1310_11728.1, RNA1509_11913, RNA1509_47996, RNA1509_57209} {RNA1509_11913, RNA1509_47996, RNA1509_57209, RNA815_10419}
2. MligTC455_27338 4582 95.45 Mlig455_037635, Mlig455_069899

Neo: -

Age: -

Region-enriched R3: 2.047/0.00162

CLCA1, CLCA4 4.037 0.734 - 0.737 0.812 0.958 0.796

Mlig455_037635 {REF} {Length: 4031} {Pfam: Calcium-activated chloride channel N terminal [PF08434.13, score=201.4]; von Willebrand factor type A domain [PF00092.30, score=28.8]} {Human: ENSG00000016490, CLCA1, chloride channel accessory 1, [Score=249, Expect=5e-69]} {Mouse: ENSMUSG00000074195, Clca4b, chloride channel accessory 4B, [Score=244, Expect=2e-67]; ENSMUSG00000028255, Clca1, chloride channel accessory 1, [Score=243, Expect=7e-67]; ENSMUSG00000056025, Clca3a1, chloride channel accessory 3A1, [Score=241, Expect=2e-66]; ENSMUSG00000028262, Clca3a2, chloride channel accessory 3A2, [Score=240, Expect=4e-66]; ENSMUSG00000068547, Clca4a, chloride channel accessory 4A, [Score=237, Expect=5e-65]; ENSMUSG00000037033, Clca3b, chloride channel accessory 3B, [Score=234, Expect=1e-63]} {Smed: dd_Smed_v6_968_0_1, dd_Smed_v6_968_0_1, [Score=146, Expect=6e-36]} {RNA1509_1957} {RNA1310_1149.2} {RNA815_989.1}

Mlig455_069899 {REF} {Length: 3833} {Pfam: Calcium-activated chloride channel N terminal [PF08434.13, score=68.1]; von Willebrand factor type A domain [PF00092.30, score=56.9]; von Willebrand factor type A domain [PF13519.8, score=40.4]; von Willebrand factor type A domain [PF13768.8, score=26.5]; VWA domain containing CoxE-like protein [PF05762.16, score=23.6]} {Human: ENSG00000016602, CLCA4, chloride channel accessory 4, [Score=150, Expect=5e-37]} {Mouse: ENSMUSG00000028262, Clca3a2, chloride channel accessory 3A2, [Score=159, Expect=7e-40]; ENSMUSG00000056025, Clca3a1, chloride channel accessory 3A1, [Score=158, Expect=1e-39]; ENSMUSG00000037033, Clca3b, chloride channel accessory 3B, [Score=156, Expect=8e-39]; ENSMUSG00000028255, Clca1, chloride channel accessory 1, [Score=152, Expect=2e-37]} {Smed: dd_Smed_v6_968_0_1, dd_Smed_v6_968_0_1, [Score=105, Expect=2e-23]} {RNA1509_1957} {RNA1310_1149.2} {RNA815_989.1}
3. MligTC455_46063 2700 56.25 Mlig455_028369

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.510

ADK 3.322 0.744 - 0.837 0.784 0.957 - Mlig455_028369 {REF} {Length: 2559} {TRANSSPLICED} {Pfam: pfkB family carbohydrate kinase [PF00294.26, score=192.8]} {Human: ENSG00000156110, ADK, adenosine kinase, [RH, Score=307, Expect=9e-103]} {Mouse: ENSMUSG00000039197, Adk, adenosine kinase, [RH, Score=307, Expect=9e-103]} {Dmel: FBgn0036337, AdenoK, Adenosine Kinase, [RH, Score=300, Expect=2e-100]} {Celegans: WBGene00011128, R07H5.8, [RH, Score=300, Expect=2e-100]} {Smed: dd_Smed_v6_627_0_1, dd_Smed_v6_627_0_1, [RH, Score=298, Expect=1e-99]} {RNA1509_11163, RNA1509_1910, RNA1509_32527, RNA1509_51676, RNA1509_6665} {RNA1310_11728.1, RNA1509_11163, RNA1509_1910, RNA1509_32527, RNA1509_51676, RNA1509_6665} {RNA1509_11163, RNA1509_1910, RNA1509_32527, RNA1509_51676, RNA1509_6665, RNA815_10419}
4. MligTC455_51037 3327 69.32 Mlig455_003845

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.213

MAT2B 3.32 - - 0.740 0.827 0.957 0.796 Mlig455_003845 {REF} {Length: 1361} {TRANSSPLICED} {Pfam: RmlD substrate binding domain [PF04321.19, score=189.1]; NAD dependent epimerase/dehydratase family [PF01370.23, score=69.3]; GDP-mannose 4,6 dehydratase [PF16363.7, score=35.7]; Polysaccharide biosynthesis protein [PF02719.17, score=33.0]; Male sterility protein [PF07993.14, score=29.9]} {Human: ENSG00000038274, MAT2B, methionine adenosyltransferase 2B, [RH, Score=239, Expect=4e-77]} {Mouse: ENSMUSG00000042032, Mat2b, methionine adenosyltransferase II, beta, [RH, Score=247, Expect=2e-80]} {Smed: dd_Smed_v6_4260_0_1, dd_Smed_v6_4260_0_1, [RH, Score=248, Expect=4e-81]} {RNA1509_1125} {RNA1310_6401} {RNA815_10189}
5. MligTC455_33892 1719 35.82 Mlig455_017173

Neo: -

Age: logFC(26M/2M)=0.665

Region-enriched R5: 1.201/0.00598

SHMT2 3.243 - 0.716 - 0.797 0.951 0.779 Mlig455_017173 {REF} {Length: 2241} {TRANSSPLICED} {Pfam: Serine hydroxymethyltransferase [PF00464.21, score=445.7]} {Human: ENSG00000182199, SHMT2, serine hydroxymethyltransferase 2, [Score=432, Expect=2e-148]} {Mouse: ENSMUSG00000025403, Shmt2, serine hydroxymethyltransferase 2 (mitochondrial), [Score=427, Expect=1e-146]} {Dmel: FBgn0029823, Shmt, Serine hydroxymethyl transferase, [Score=417, Expect=3e-143]} {Celegans: WBGene00003214, mel-32, Serine hydroxymethyltransferase, [Score=435, Expect=4e-150]} {Smed: dd_Smed_v6_2312_0_1, dd_Smed_v6_2312_0_1, [Score=425, Expect=1e-146]} {RNA1509_2637} {RNA1310_8717.1} {RNA815_3601}
6. MligTC455_49658 3392 70.66 Mlig455_011590

Neo: -

Age: -

Region-enriched R3: 1.949/0.00002

3.229 0.717 - - 0.789 0.961 0.762 Mlig455_011590 {REF} {Length: 2376} {RNA1509_3964} {RNA1310_32368} {RNA815_14237.1}
7. MligTC455_36145 2577 53.69 Mlig455_029420

Neo: Neoblast, stringent

Age: logFC(26M/2M)=0.360

Region-enriched R5: 1.284/0.00002

Regeneration-upregulated BL: 1.551

Regeneration-enriched BL: 1.551

KPNA2 2.574 - - 0.804 0.817 0.953 - Mlig455_029420 {REF} {Length: 2476} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=191.5]; Importin beta binding domain [PF01749.22, score=66.2]; HEAT-like repeat [PF13513.8, score=63.2]; Atypical Arm repeat [PF16186.7, score=62.2]; HEAT repeats [PF13646.8, score=51.2]; HEAT repeat [PF02985.24, score=34.0]} {Human: ENSG00000182481, KPNA2, karyopherin subunit alpha 2, [Score=458, Expect=4e-156]} {Mouse: ENSMUSG00000018362, Kpna2, karyopherin (importin) alpha 2, [Score=451, Expect=2e-153]; ENSMUSG00000066878, Gm10184, predicted pseudogene 10184, [Score=451, Expect=2e-153]; ENSMUSG00000027782, Kpna4, karyopherin (importin) alpha 4, [Score=431, Expect=1e-145]} {Dmel: FBgn0267727, Pen, Pendulin, [RH, Score=397, Expect=2e-132]} {Celegans: WBGene00002074, ima-3, Importin subunit alpha-3, [Score=376, Expect=1e-124]} {Smed: dd_Smed_v6_590_0_1, dd_Smed_v6_590_0_1, [Score=419, Expect=2e-141]} {RNA1509_1276} {RNA1310_8995.1, RNA1509_1276} {RNA1509_1276, RNA815_2897}
8. MligTC455_25705 827 17.22 Mlig455_021270

Neo: -

Age: -

Region-enriched R6: 2.555/0.01551

LAMB1 2.517 - - 0.700 - 0.965 0.852 Mlig455_021270 {REF} {Length: 6132} {Pfam: Laminin EGF domain [PF00053.26, score=315.1]; Laminin N-terminal (Domain VI) [PF00055.19, score=163.3]; Crescentin protein [PF19220.2, score=25.9]} {Human: ENSG00000091136, LAMB1, laminin subunit beta 1, [RH, Score=853, Expect=0.0]; ENSG00000172037, LAMB2, laminin subunit beta 2, [RH, Score=823, Expect=0.0]} {Mouse: ENSMUSG00000002900, Lamb1, laminin B1, [RH, Score=858, Expect=0.0]} {Dmel: FBgn0261800, LanB1, [RH, Score=861, Expect=0.0]} {Celegans: WBGene00002247, lam-1, LAMinin related. See also lmb, [RH, Score=853, Expect=0.0]} {Smed: dd_Smed_v6_6093_0_1, dd_Smed_v6_6093_0_1, [RH, Score=427, Expect=8e-123]} {RNA1509_3908} {RNA1310_668.1, RNA1509_3908} {RNA1509_3908, RNA815_1065}
9. MligTC455_49659 4741 98.77 Mlig455_011512, Mlig455_050003

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.314

Region-enriched R3: 1.923/0.00380

2.461 0.738 - - - 0.959 0.764

Mlig455_011512 {REF} {Length: 2299} {RNA1509_3964} {RNA1310_32368} {RNA815_14237.1}

Mlig455_050003 {REF} {Length: 1812} {RNA1509_3964} {RNA1310_32368} {RNA815_14237.1}
10. MligTC455_41720 3651 76.05 Mlig455_059515

Neo: -

Age: Down-Down-Up

Region-enriched R4: 1.422/0.00269

HPGDS 2.461 - - 0.721 - 0.958 0.782 Mlig455_059515 {REF} {Length: 981} {TRANSSPLICED} {Pfam: Glutathione S-transferase, C-terminal domain [PF14497.8, score=49.1]; Glutathione S-transferase, C-terminal domain [PF00043.27, score=40.7]; Glutathione S-transferase, N-terminal domain [PF02798.22, score=25.4]} {Human: ENSG00000163106, HPGDS, hematopoietic prostaglandin D synthase, [Score=82.0, Expect=7e-19]; ENSG00000084207, GSTP1, glutathione S-transferase pi 1, [Score=79.7, Expect=7e-18]} {Mouse: ENSMUSG00000097830, Gstp1, glutathione S-transferase, pi 1, [Score=80.9, Expect=2e-18]; ENSMUSG00000060803, Gstp1, glutathione S-transferase, pi 1, [Score=80.9, Expect=2e-18]} {Dmel: FBgn0010226, GstS1, Glutathione S transferase S1, [Score=70.5, Expect=1e-14]} {Celegans: WBGene00001789, gst-41, Glutathione S-Transferase, [Score=89.4, Expect=5e-22]} {Smed: dd_Smed_v6_816_0_1, dd_Smed_v6_816_0_1, [Score=68.2, Expect=3e-14]} {RNA1509_9144, RNA1509_9822} {RNA1310_35676, RNA1509_9144, RNA1509_9822} {RNA1509_9144, RNA1509_9822, RNA815_16772.1}
11. MligTC455_44115 11215 233.65 Mlig455_014574

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.771

Region-enriched R3: 1.790/0.00143

BHMT 2.459 - - 0.764 - 0.964 0.731 Mlig455_014574 {REF} {Length: 1887} {Pfam: Homocysteine S-methyltransferase [PF02574.18, score=169.9]} {Human: ENSG00000145692, BHMT, betaine--homocysteine S-methyltransferase, [RH, Score=560, Expect=0.0]} {Mouse: ENSMUSG00000069324, Gm5096, predicted gene 5096, [RH, Score=565, Expect=0.0]; ENSMUSG00000074768, Bhmt, betaine-homocysteine methyltransferase, [RH, Score=565, Expect=0.0]} {Celegans: WBGene00010988, metr-1, Probable methionine synthase, [Score=52.4, Expect=5e-07]} {Smed: dd_Smed_v6_873_0_1, dd_Smed_v6_873_0_1, [RH, Score=577, Expect=0.0]} {RNA1509_10081, RNA1509_26539, RNA1509_300} {RNA1310_16129.1, RNA1509_10081, RNA1509_26539} {RNA1509_10081, RNA1509_26539, RNA815_5900.1}
12. MligTC455_15733 28121 585.86 Mlig455_067264

Neo: -

Age: logFC(26M/2M)=-0.415

1.784 - - - 0.972 - 0.812 Mlig455_067264 {REF} {Length: 1482} {Pfam: Protein of unknown function (DUF3421) [PF11901.10, score=119.0]} {Dmel: FBgn0034583, CG10527, [Score=73.9, Expect=5e-16]} {Smed: dd_Smed_v6_766_0_1, dd_Smed_v6_766_0_1, [RH, Score=136, Expect=1e-41]} {RNA1509_18673, RNA1509_9503} {RNA1310_39489, RNA1509_9503} {RNA1509_9503, RNA815_16771}
13. MligTC455_44116 15886 330.96 Mlig455_070259

Neo: -

Age: logFC(26M/2M)=-0.821

Region-enriched R3: 1.626/0.01191

BHMT 1.715 - - 0.760 - 0.955 - Mlig455_070259 {REF} {Length: 1926} {Pfam: Homocysteine S-methyltransferase [PF02574.18, score=168.1]} {Human: ENSG00000145692, BHMT, betaine--homocysteine S-methyltransferase, [RH, Score=562, Expect=0.0]} {Mouse: ENSMUSG00000069324, Gm5096, predicted gene 5096, [RH, Score=570, Expect=0.0]; ENSMUSG00000074768, Bhmt, betaine-homocysteine methyltransferase, [RH, Score=570, Expect=0.0]} {Celegans: WBGene00010988, metr-1, Probable methionine synthase, [Score=52.4, Expect=5e-07]} {Smed: dd_Smed_v6_873_0_1, dd_Smed_v6_873_0_1, [RH, Score=578, Expect=0.0]} {RNA1509_1011, RNA1509_1309, RNA1509_300, RNA1509_6942} {RNA1310_16129.1, RNA1509_1011, RNA1509_1309, RNA1509_300, RNA1509_6942} {RNA1509_1011, RNA1509_1309, RNA1509_300, RNA1509_6942, RNA815_5900.1}
14. MligTC455_42151 2150 44.78 Mlig455_031754

Neo: -

Age: logFC(26M/2M)=-0.411

Region-enriched R3: 1.586/0.00024
Region-enriched R4: 1.056/0.04463

0.966 - - - - 0.966 - Mlig455_031754 {REF} {Length: 1956} {Pfam: Lectin C-type domain [PF00059.23, score=24.6]} {Celegans: WBGene00016619, C43H6.6, [Score=50.4, Expect=2e-06]} {RNA1509_13408, RNA1509_53962} {RNA1310_19331.1, RNA1509_53962} {RNA1509_53962, RNA815_8190.1}
15. MligTC455_22885 267 5.57 Mlig455_063215

Neo: -

Age: -

NIPBL 0.964 - - - - 0.964 - Mlig455_063215 {REF} {Length: 3862} {Pfam: Sister chromatid cohesion C-terminus [PF12830.9, score=199.5]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=22.1]} {Human: ENSG00000164190, NIPBL, NIPBL, cohesin loading factor, [Score=412, Expect=7e-125]} {Mouse: ENSMUSG00000022141, Nipbl, NIPBL cohesin loading factor, [Score=411, Expect=9e-125]} {Dmel: FBgn0026401, Nipped-B, [Score=345, Expect=2e-102]} {Celegans: WBGene00004166, pqn-85, Nipped-B-like protein pqn-85, [Score=241, Expect=5e-67]} {Smed: dd_Smed_v6_3927_0_2, dd_Smed_v6_3927_0_2, [Score=397, Expect=4e-120]} {RNA1509_40869} {RNA1310_2931} {RNA815_211.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA