TomoSeq data search

Data search

Results for MligTC455_46075

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_46075

310

6.46

Mlig455_065505

Neo: -

Age: -

MITD1

Mlig455_065505 {REF} {Length: 3583} {TRANSSPLICED} {Pfam: Phospholipase D-like domain at C-terminus of MIT [PF16565.7, score=150.5]; MIT (microtubule interacting and transport) domain [PF04212.20, score=44.8]} {Human: ENSG00000158411, MITD1, microtubule interacting and trafficking domain containing 1, [RH, Score=169, Expect=2e-51]} {Mouse: ENSMUSG00000026088, Mitd1, MIT, microtubule interacting and transport, domain containing 1, [RH, Score=172, Expect=1e-52]} {Dmel: FBgn0035482, CG14985, [RH, Score=146, Expect=5e-43]} {Celegans: WBGene00013436, Y66D12A.10, [RH, Score=115, Expect=4e-31]} {Smed: dd_Smed_v6_6498_0_1, dd_Smed_v6_6498_0_1, [RH, Score=147, Expect=2e-43]} {RNA1509_41881} {RNA1310_33336.1, RNA1509_41881} {RNA1509_41881, RNA815_16547}

Cumulative graph for MligTC455_46075

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.378	3.034	0.75963	1.00000
RegionR2	0.554	3.034	0.43760	0.82692
RegionR3	-0.283	3.034	0.60385	1.00000
RegionR4	-0.792	3.034	0.22898	0.52173
RegionR5	0.292	3.034	0.52154	0.88444
RegionR6	-0.405	3.034	0.45837	1.00000
RegionR7	-0.53	3.034	0.48575	1.00000
RegionR8	0.786	3.034	0.31534	0.94781

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.704	3.034	0.70476	1.00000
RegenerationR2	-0.378	3.034	0.55973	0.89841
RegenerationR3	-0.404	3.034	0.58046	0.89892
RegenerationR4	0	3.034	0.98442	1.00000
RegenerationR5	-0.524	3.034	0.41901	0.81054
RegenerationR6	0.43	3.034	0.55463	0.84197
RegenerationBL	1.665	3.034	0.02260	0.16446
RegenerationTP	0.78	3.034	0.34508	0.78741

Genes with expression patterns similar to MligTC455_46075

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_46075	310	6.46	Mlig455_065505	Neo: - Age: -	MITD1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_065505 {REF} {Length: 3583} {TRANSSPLICED} {Pfam: Phospholipase D-like domain at C-terminus of MIT [PF16565.7, score=150.5]; MIT (microtubule interacting and transport) domain [PF04212.20, score=44.8]} {Human: ENSG00000158411, MITD1, microtubule interacting and trafficking domain containing 1, [RH, Score=169, Expect=2e-51]} {Mouse: ENSMUSG00000026088, Mitd1, MIT, microtubule interacting and transport, domain containing 1, [RH, Score=172, Expect=1e-52]} {Dmel: FBgn0035482, CG14985, [RH, Score=146, Expect=5e-43]} {Celegans: WBGene00013436, Y66D12A.10, [RH, Score=115, Expect=4e-31]} {Smed: dd_Smed_v6_6498_0_1, dd_Smed_v6_6498_0_1, [RH, Score=147, Expect=2e-43]} {RNA1509_41881} {RNA1310_33336.1, RNA1509_41881} {RNA1509_41881, RNA815_16547}
2.	MligTC455_40018	295	6.15	Mlig455_037646, Mlig455_069914	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-1.048 Region-enriched R8: 4.445/0.00001 Region-enriched R7: 3.788/0.00007	AC243734.1, CHRNA2	0.974	-	-	-	0.974	-	-	Mlig455_037646 {REF} {Length: 2101} {TRANSSPLICED} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=46.2]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=27.0]} {Human: ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=68.9, Expect=6e-12]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=65.5, Expect=8e-11]} {Mouse: ENSMUSG00000035594, Chrna5, cholinergic receptor, nicotinic, alpha polypeptide 5, [Score=75.5, Expect=3e-14]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=73.2, Expect=2e-13]} {Dmel: FBgn0032151, nAChRalpha6, nicotinic Acetylcholine Receptor alpha6, [Score=82.8, Expect=9e-17]} {Celegans: WBGene00006774, unc-38, Acetylcholine receptor subunit alpha-type unc-38, [Score=71.2, Expect=4e-13]} {Smed: dd_Smed_v6_8486_0_1, dd_Smed_v6_8486_0_1, [Score=78.2, Expect=2e-15]} {RNA1509_50033} {RNA1310_22440} {RNA815_15508} Mlig455_069914 {REF} {Length: 3748} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=68.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=60.3]} {Human: ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=108, Expect=5e-25]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=108, Expect=9e-25]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=108, Expect=5e-25]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=107, Expect=1e-24]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=99.4, Expect=5e-22]} {Celegans: WBGene00000951, deg-3, Acetylcholine receptor subunit alpha-type deg-3, [Score=94.0, Expect=3e-20]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=113, Expect=7e-27]} {RNA1509_50033} {RNA1310_16096, RNA1509_50033} {RNA1509_50033, RNA815_15508}
3.	MligTC455_41930	202	4.2	Mlig455_020366, Mlig455_020425	Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.811	MAP3K19	0.961	-	-	-	0.961	-	-	Mlig455_020366 {REF} {Length: 1403} {Pfam: Protein kinase domain [PF00069.27, score=198.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=156.9]; Fungal protein kinase [PF17667.3, score=21.9]; ABC1 atypical kinase-like domain [PF03109.18, score=20.5]; Kinase-like [PF14531.8, score=20.3]; Phosphotransferase enzyme family [PF01636.25, score=19.0]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=133, Expect=3e-35]; ENSG00000163482, STK36, serine/threonine kinase 36, [Score=131, Expect=2e-36]; ENSG00000095015, MAP3K1, mitogen-activated protein kinase kinase kinase 1, [Score=127, Expect=1e-32]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=134, Expect=1e-35]; ENSMUSG00000073457, Smok2b, sperm motility kinase 2B, [Score=133, Expect=1e-35]; ENSMUSG00000033276, Stk36, serine/threonine kinase 36, [Score=132, Expect=1e-34]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=122, Expect=3e-31]} {Celegans: WBGene00006443, pak-2, Serine/threonine-protein kinase pak-2, [Score=127, Expect=3e-33]} {Smed: dd_Smed_v6_9065_0_1, dd_Smed_v6_9065_0_1, [Score=122, Expect=2e-33]} {RNA1310_30984} {RNA815_35372} Mlig455_020425 {REF} {Length: 1227} {Pfam: Protein kinase domain [PF00069.27, score=146.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=116.4]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=113, Expect=2e-28]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=114, Expect=1e-28]} {Dmel: FBgn0267698, Pak, p21-activated kinase, [Score=101, Expect=4e-24]} {Celegans: WBGene00006443, pak-2, Serine/threonine-protein kinase pak-2, [Score=102, Expect=9e-25]} {Smed: dd_Smed_v6_9065_0_1, dd_Smed_v6_9065_0_1, [Score=95.1, Expect=3e-23]} {RNA1310_30984} {RNA815_35372}
4.	MligTC455_53304	285	5.93	Mlig455_029251	Neo: Irradiation Age: Up-Down-Down	PKN2	0.951	-	-	-	0.951	-	-	Mlig455_029251 {REF} {Length: 5848} {Pfam: Protein kinase domain [PF00069.27, score=200.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=127.4]; Hr1 repeat [PF02185.18, score=53.6]; Protein kinase C terminal domain [PF00433.26, score=38.2]; Chromate resistance exported protein [PF09828.11, score=22.6]; Kinase-like [PF14531.8, score=21.8]} {Human: ENSG00000065243, PKN2, protein kinase N2, [RH, Score=577, Expect=0.0]} {Mouse: ENSMUSG00000004591, Pkn2, protein kinase N2, [RH, Score=573, Expect=0.0]} {Dmel: FBgn0020621, Pkn, Protein kinase N, [Score=466, Expect=1e-153]} {Celegans: WBGene00009793, pkn-1, Protein Kinase N (PKN) homolog, [RH, Score=449, Expect=5e-142]} {Smed: dd_Smed_v6_7015_0_1, dd_Smed_v6_7015_0_1, [RH, Score=334, Expect=2e-98]} {RNA1509_11806} {RNA1310_1971.1} {RNA815_4789}

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