M. lignano Tomo-Seq
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Results for MligTC455_46171

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_46171 1132 23.58 Mlig455_048435, Mlig455_048580

Neo: Int S/G2/M

Age: -

Regeneration-upregulated BL: 1.911

Regeneration-enriched BL: 1.911

Mlig455_048435 {REF} {Length: 1220} {TRANSSPLICED} {Mouse: ENSMUSG00000034211, Mrps17, mitochondrial ribosomal protein S17, [RH, Score=53.9, Expect=2e-09]} {Smed: dd_Smed_v6_7788_0_1, dd_Smed_v6_7788_0_1, [RH, Score=137, Expect=2e-41]} {RNA1509_38449} {RNA1310_51626} {RNA815_28751}

Mlig455_048580 {REF} {Length: 1212} {TRANSSPLICED} {Mouse: ENSMUSG00000034211, Mrps17, mitochondrial ribosomal protein S17, [RH, Score=53.9, Expect=2e-09]} {Smed: dd_Smed_v6_7788_0_1, dd_Smed_v6_7788_0_1, [RH, Score=137, Expect=2e-41]} {RNA1509_35302, RNA1509_38449, RNA1509_45887} {RNA1310_51626, RNA1509_35302, RNA1509_45887} {RNA1509_35302, RNA1509_45887, RNA815_28751}

Cumulative graph for MligTC455_46171

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.049 4.853 0.21941 0.86214
RegionR2 0.375 4.853 0.46727 0.85318
RegionR3 -0.411 4.853 0.30743 0.84686
RegionR4 0.237 4.853 0.62742 0.93616
RegionR5 0.238 4.853 0.49519 0.85856
RegionR6 -0.176 4.853 0.64923 1.00000
RegionR7 -0.735 4.853 0.13708 0.69359
RegionR8 -0.577 4.853 0.32601 0.95920

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.485 4.853 0.69708 1.00000
RegenerationR2 -0.458 4.853 0.30454 0.74491
RegenerationR3 0.688 4.853 0.18282 0.61877
RegenerationR4 0.507 4.853 0.31494 0.75441
RegenerationR5 0.54 4.853 0.23763 0.67163
RegenerationR6 0.73 4.853 0.13506 0.45092
RegenerationBL 1.911 4.853 0.00012 0.00509 Specific for BL: 1.911
RegenerationTP -0.352 4.853 0.59487 0.95758


Genes with expression patterns similar to MligTC455_46171

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_46171 1132 23.58 Mlig455_048435, Mlig455_048580

Neo: Int S/G2/M

Age: -

Regeneration-upregulated BL: 1.911

Regeneration-enriched BL: 1.911

 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_048435 {REF} {Length: 1220} {TRANSSPLICED} {Mouse: ENSMUSG00000034211, Mrps17, mitochondrial ribosomal protein S17, [RH, Score=53.9, Expect=2e-09]} {Smed: dd_Smed_v6_7788_0_1, dd_Smed_v6_7788_0_1, [RH, Score=137, Expect=2e-41]} {RNA1509_38449} {RNA1310_51626} {RNA815_28751}

Mlig455_048580 {REF} {Length: 1212} {TRANSSPLICED} {Mouse: ENSMUSG00000034211, Mrps17, mitochondrial ribosomal protein S17, [RH, Score=53.9, Expect=2e-09]} {Smed: dd_Smed_v6_7788_0_1, dd_Smed_v6_7788_0_1, [RH, Score=137, Expect=2e-41]} {RNA1509_35302, RNA1509_38449, RNA1509_45887} {RNA1310_51626, RNA1509_35302, RNA1509_45887} {RNA1509_35302, RNA1509_45887, RNA815_28751}
2. MligTC455_17769 618 12.87 Mlig455_051397

Neo: -

Age: logFC(26M/2M)=0.620

 CYP4V2 0.969 - - - - 0.969 - Mlig455_051397 {REF} {Length: 2080} {TRANSSPLICED} {Pfam: Cytochrome P450 [PF00067.24, score=310.4]} {Human: ENSG00000145476, CYP4V2, cytochrome P450 family 4 subfamily V member 2, [Score=379, Expect=2e-126]} {Mouse: ENSMUSG00000079057, Cyp4v3, cytochrome P450, family 4, subfamily v, polypeptide 3, [Score=377, Expect=6e-126]} {Dmel: FBgn0015032, Cyp4c3, Cytochrome P450-4c3, [Score=349, Expect=3e-115]} {Celegans: WBGene00013585, cyp-42A1, CYtochrome P450 family, [Score=327, Expect=6e-107]} {Smed: dd_Smed_v6_4319_0_1, dd_Smed_v6_4319_0_1, [Score=98.2, Expect=6e-22]} {RNA1509_60059} {RNA1310_9492} {RNA815_3644.1}
3. MligTC455_47999 148 3.07 Mlig455_000492

Neo: -

Age: -

 SCARB2 0.969 - - 0.969 - - - Mlig455_000492 {REF} {Length: 2791} {Pfam: CD36 family [PF01130.23, score=368.6]} {Human: ENSG00000138760, SCARB2, scavenger receptor class B member 2, [Score=253, Expect=1e-77]} {Mouse: ENSMUSG00000029426, Scarb2, scavenger receptor class B, member 2, [Score=256, Expect=7e-79]} {Dmel: FBgn0010435, emp, epithelial membrane protein, [Score=192, Expect=8e-55]} {Celegans: WBGene00013578, scav-2, SCAVenger receptor (CD36 family) related, [RH, Score=167, Expect=4e-45]} {Smed: dd_Smed_v6_2304_0_1, dd_Smed_v6_2304_0_1, [Score=289, Expect=6e-92]} {RNA1509_17179} {RNA1310_15296} {RNA815_6402.1}
4. MligTC455_14275 189 3.93 Mlig455_053257

Neo: -

Age: logFC(26M/2M)=0.328

Regeneration-upregulated R5: 3.099

Regeneration-enriched R5: 3.099

 PLBD1 0.958 - - - - 0.958 - Mlig455_053257 {REF} {Length: 2661} {Pfam: Phospholipase B [PF04916.15, score=512.0]} {Human: ENSG00000121316, PLBD1, phospholipase B domain containing 1, [RH, Score=462, Expect=1e-156]} {Mouse: ENSMUSG00000030214, Plbd1, phospholipase B domain containing 1, [RH, Score=479, Expect=2e-163]} {Dmel: FBgn0016031, lama, lamina ancestor, [Score=90.1, Expect=1e-18]} {Celegans: WBGene00008607, F09B12.3, Putative phospholipase B-like 2, [RH, Score=236, Expect=9e-70]} {Smed: dd_Smed_v6_485_0_1, dd_Smed_v6_485_0_1, [Score=207, Expect=4e-59]} {RNA1509_11047, RNA1509_9263} {RNA1310_7896, RNA1509_11047} {RNA1509_11047, RNA815_2504}
5. MligTC455_16469 225 4.7 Mlig455_053114

Neo: -

Age: Up-Down-Down

 0.956 - - 0.956 - - - Mlig455_053114 {REF} {Length: 2888} {TRANSSPLICED} {Pfam: Acetyltransferase (GNAT) family [PF00583.27, score=39.9]; Acetyltransferase (GNAT) domain [PF13673.9, score=31.9]; Acetyltransferase (GNAT) domain [PF13508.9, score=26.9]} {Mouse: ENSMUSG00000069835, Sat2, spermidine/spermine N1-acetyl transferase 2, [RH, Score=103, Expect=5e-26]} {Celegans: WBGene00008408, D2023.4, [RH, Score=51.2, Expect=1e-07]} {RNA1509_25747} {RNA1310_19486} {RNA815_8115}

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