Data search
Results for MligTC455_46183
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_46183 | 368 | 7.66 | Mlig455_003558 | Neo: - Age: logFC(26M/2M)=0.511 Region-enriched R3: 1.946/0.04257 |
Mlig455_003558 {REF} {Length: 2680} {Pfam: Retinol binding protein receptor [PF14752.8, score=182.4]} {Mouse: ENSMUSG00000028327, Stra6l, STRA6-like, [Score=73.6, Expect=1e-13]} {Smed: dd_Smed_v6_8135_1_1, dd_Smed_v6_8135_1_1, [Score=95.5, Expect=4e-21]} {RNA1509_32253} {RNA1310_3008.2} {RNA815_2696.1} |
Cumulative graph for MligTC455_46183
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.253 | 3.456 | 0.45005 | 1.00000 | |
| RegionR2 | -1.249 | 3.456 | 0.98981 | 1.00000 | |
| RegionR3 | 1.946 | 3.456 | 0.00163 | 0.04257 | |
| RegionR4 | 1.736 | 3.456 | 0.02461 | 0.11803 | |
| RegionR5 | 1.48 | 3.456 | 0.01928 | 0.09442 | |
| RegionR6 | 0.954 | 3.456 | 0.19521 | 0.76332 | |
| RegionR7 | -0.113 | 3.456 | 0.84313 | 1.00000 | |
| RegionR8 | -6.007 | 3.456 | 0.02591 | 0.31372 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.348 | 3.456 | 0.20712 | 0.94695 | |
| RegenerationR2 | 1.296 | 3.456 | 0.04067 | 0.33273 | |
| RegenerationR3 | -0.113 | 3.456 | 0.83054 | 0.99106 | |
| RegenerationR4 | 0.41 | 3.456 | 0.48056 | 0.85867 | |
| RegenerationR5 | 0.6 | 3.456 | 0.23709 | 0.67109 | |
| RegenerationR6 | 0.593 | 3.456 | 0.29399 | 0.64455 | |
| RegenerationBL | 2.463 | 3.456 | 0.04681 | 0.24757 | |
| RegenerationTP | 3.792 | 3.456 | 0.01413 | 0.20341 |
Genes with expression patterns similar to MligTC455_46183
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_46183 | 368 | 7.66 | Mlig455_003558 | Neo: - Age: logFC(26M/2M)=0.511 Region-enriched R3: 1.946/0.04257 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_003558 {REF} {Length: 2680} {Pfam: Retinol binding protein receptor [PF14752.8, score=182.4]} {Mouse: ENSMUSG00000028327, Stra6l, STRA6-like, [Score=73.6, Expect=1e-13]} {Smed: dd_Smed_v6_8135_1_1, dd_Smed_v6_8135_1_1, [Score=95.5, Expect=4e-21]} {RNA1509_32253} {RNA1310_3008.2} {RNA815_2696.1} | |
| 2. | MligTC455_43167 | 730 | 15.2 | Mlig455_070836 | Neo: - Age: Down-Up-Down Region-enriched R4: 1.826/0.00022 |
SNAPIN | 1.686 | 0.734 | - | - | - | 0.952 | - | Mlig455_070836 {REF} {Length: 2174} {TRANSSPLICED} {Pfam: Snapin/Pallidin [PF14712.8, score=80.8]} {Human: ENSG00000143553, SNAPIN, SNAP associated protein, [RH, Score=114, Expect=1e-32]} {Mouse: ENSMUSG00000001018, Snapin, SNAP-associated protein, [RH, Score=110, Expect=1e-31]} {Dmel: FBgn0031455, Snapin, SNAP associated protein, [RH, Score=62.0, Expect=7e-13]} {Celegans: WBGene00015327, snpn-1, SNAPIN protein homolog, [RH, Score=44.3, Expect=2e-06]} {Smed: dd_Smed_v6_1781_0_1, dd_Smed_v6_1781_0_1, [RH, Score=101, Expect=2e-28]} {RNA1509_8939} {RNA1310_10828} {RNA815_7128} |
| 3. | MligTC455_15676 | 327 | 6.81 | Mlig455_055505 | Neo: Neoblast, stringent Age: Down-Up-Up, logFC(26M/2M)=0.541 Region-enriched R5: 2.244/0.00001 |
RAD1 | 1.683 | - | - | 0.973 | 0.710 | - | - | Mlig455_055505 {REF} {Length: 1302} {TRANSSPLICED} {Pfam: Repair protein Rad1/Rec1/Rad17 [PF02144.18, score=188.6]} {Human: ENSG00000113456, RAD1, RAD1 checkpoint DNA exonuclease, [RH, Score=198, Expect=2e-61]} {Mouse: ENSMUSG00000022248, Rad1, RAD1 checkpoint DNA exonuclease, [RH, Score=196, Expect=7e-61]} {Celegans: WBGene00003417, mrt-2, MoRTal germline; Rad1-like protein, [RH, Score=105, Expect=3e-26]} {Smed: dd_Smed_v6_12478_0_1, dd_Smed_v6_12478_0_1, [RH, Score=200, Expect=2e-62]} {RNA1509_18672} {RNA1310_10742.1, RNA1509_18672} {RNA1509_18672, RNA815_6217} |
| 4. | MligTC455_11718 | 110 | 2.3 | Mlig455_009100 | Neo: - Age: - Region-enriched R4: 2.495/0.04544 |
1.666 | - | - | - | 0.956 | 0.710 | - | Mlig455_009100 {REF} {Length: 1916} {TRANSSPLICED} {RNA1509_23206} {RNA1310_55434} {RNA815_29179} | |
| 5. | MligTC455_36696 | 1081 | 22.51 | Mlig455_029781, Mlig455_029931 | Neo: Irradiation Age: - Region-specific R5: 3.121 Region-enriched R5: 2.340/0.00000 |
NOTCH1 | 0.961 | - | - | - | 0.961 | - | - | Mlig455_029781 {REF} {Length: 5944} {Pfam: EGF-like domain [PF00008.29, score=196.5]; Ankyrin repeats (3 copies) [PF12796.9, score=151.2]; Human growth factor-like EGF [PF12661.9, score=101.4]; Ankyrin repeat [PF00023.32, score=79.2]; Ankyrin repeat [PF13606.8, score=73.4]; Ankyrin repeats (many copies) [PF13857.8, score=70.0]; Ankyrin repeats (many copies) [PF13637.8, score=66.1]; LNR domain [PF00066.19, score=63.4]; EGF-like domain [PF07974.15, score=53.4]; Calcium-binding EGF domain [PF07645.17, score=32.5]; Alliinase EGF-like domain [PF04863.15, score=23.6]; EGF domain [PF12947.9, score=19.7]} {Human: ENSG00000148400, NOTCH1, notch 1, [RH, Score=529, Expect=6e-156]; ENSG00000234876, NOTCH4, notch 4, [RH, Score=518, Expect=7e-154]; ENSG00000223355, NOTCH4, notch 4, [RH, Score=518, Expect=7e-154]; ENSG00000235396, NOTCH4, notch 4, [RH, Score=518, Expect=6e-154]; ENSG00000204301, NOTCH4, notch 4, [RH, Score=518, Expect=7e-154]; ENSG00000232339, NOTCH4, notch 4, [RH, Score=518, Expect=7e-154]; ENSG00000206312, NOTCH4, notch 4, [RH, Score=516, Expect=3e-153]; ENSG00000074181, NOTCH3, notch 3, [RH, Score=515, Expect=1e-151]} {Mouse: ENSMUSG00000038146, Notch3, notch 3, [RH, Score=526, Expect=2e-155]} {Dmel: FBgn0004647, N, Notch, [RH, Score=541, Expect=4e-160]} {Celegans: WBGene00001609, glp-1, [RH, Score=262, Expect=5e-71]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [RH, Score=386, Expect=2e-109]} {RNA1509_4917} {RNA1310_700} {RNA815_15747} Mlig455_029931 {REF} {Length: 6142} {Pfam: EGF-like domain [PF00008.29, score=185.5]; Ankyrin repeats (3 copies) [PF12796.9, score=151.2]; Human growth factor-like EGF [PF12661.9, score=95.1]; Ankyrin repeat [PF00023.32, score=79.2]; Ankyrin repeat [PF13606.8, score=73.5]; Ankyrin repeats (many copies) [PF13857.8, score=70.1]; Ankyrin repeats (many copies) [PF13637.8, score=66.0]; EGF-like domain [PF07974.15, score=63.3]; LNR domain [PF00066.19, score=62.5]; Calcium-binding EGF domain [PF07645.17, score=32.8]; Alliinase EGF-like domain [PF04863.15, score=23.6]; EGF domain [PF12947.9, score=19.8]} {Human: ENSG00000148400, NOTCH1, notch 1, [RH, Score=527, Expect=2e-155]; ENSG00000234876, NOTCH4, notch 4, [RH, Score=520, Expect=2e-154]; ENSG00000204301, NOTCH4, notch 4, [RH, Score=520, Expect=2e-154]; ENSG00000223355, NOTCH4, notch 4, [RH, Score=520, Expect=3e-154]; ENSG00000232339, NOTCH4, notch 4, [RH, Score=520, Expect=2e-154]; ENSG00000235396, NOTCH4, notch 4, [RH, Score=519, Expect=4e-154]; ENSG00000206312, NOTCH4, notch 4, [RH, Score=516, Expect=3e-153]; ENSG00000074181, NOTCH3, notch 3, [RH, Score=511, Expect=2e-150]} {Mouse: ENSMUSG00000026923, Notch1, notch 1, [RH, Score=546, Expect=5e-162]; ENSMUSG00000038146, Notch3, notch 3, [RH, Score=521, Expect=8e-154]} {Dmel: FBgn0004647, N, Notch, [RH, Score=588, Expect=3e-176]} {Celegans: WBGene00003001, lin-12, [RH, Score=282, Expect=4e-77]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=388, Expect=4e-110]} {RNA1509_4917} {RNA1310_700, RNA1509_4917} {RNA1509_4917, RNA815_15747} |
| 6. | MligTC455_28645 | 515 | 10.72 | Mlig455_015870, Mlig455_016091 | Neo: - Age: - |
0.952 | - | - | - | 0.952 | - | - | Mlig455_015870 {REF} {Length: 1052} {NoTransDecoderORF} {RNA1310_70469} {RNA815_35485} Mlig455_016091 {REF} {Length: 1258} {NoTransDecoderORF} {RNA1310_70469} {RNA815_35485} |
|
| 7. | MligTC455_30666 | 311 | 6.48 | Mlig455_035416 | Neo: - Age: Up-Down-Up Region-enriched R3: 2.547/0.01150 |
PTPRC | 0.952 | - | - | - | - | - | 0.952 | Mlig455_035416 {REF} {Length: 2275} {TRANSSPLICED} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=223.3]; Fibronectin type III domain [PF00041.23, score=119.8]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=26.1]} {Human: ENSG00000081237, PTPRC, protein tyrosine phosphatase, receptor type C, [Score=190, Expect=4e-48]; ENSG00000127329, PTPRB, protein tyrosine phosphatase, receptor type B, [Score=186, Expect=9e-47]; ENSG00000105426, PTPRS, protein tyrosine phosphatase, receptor type S, [Score=184, Expect=3e-46]; ENSG00000149177, PTPRJ, protein tyrosine phosphatase, receptor type J, [Score=184, Expect=3e-46]; ENSG00000282932, PTPRD, protein tyrosine phosphatase, receptor type D, [Score=182, Expect=1e-45]; ENSG00000142949, PTPRF, protein tyrosine phosphatase, receptor type F, [Score=182, Expect=1e-45]; ENSG00000153707, PTPRD, protein tyrosine phosphatase, receptor type D, [Score=182, Expect=1e-45]} {Mouse: ENSMUSG00000026395, Ptprc, protein tyrosine phosphatase, receptor type, C, [Score=192, Expect=5e-49]; ENSMUSG00000013236, Ptprs, protein tyrosine phosphatase, receptor type, S, [Score=184, Expect=3e-46]} {Dmel: FBgn0004369, Ptp99A, Protein tyrosine phosphatase 99A, [Score=165, Expect=7e-41]} {Celegans: WBGene00009717, dep-1, Receptor-type tyrosine-protein phosphatase dep-1, [Score=176, Expect=1e-47]} {Smed: dd_Smed_v6_768_0_1, dd_Smed_v6_768_0_1, [RH, Score=206, Expect=2e-53]} {RNA1509_40641} {RNA1310_3303.1} {RNA815_718.1} |
| 8. | MligTC455_50788 | 55 | 1.14 | Mlig455_001945 | Neo: - Age: Down-Up-Up Region-enriched R4: 4.857/0.00120 |
GATA6 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_001945 {REF} {Length: 1855} {tRNA: Val(CAC),pseudo, score=26.6} {Pfam: GATA zinc finger [PF00320.29, score=52.2]; TFIIB zinc-binding [PF08271.14, score=20.7]} {Human: ENSG00000141448, GATA6, GATA binding protein 6, [Score=87.8, Expect=1e-18]; ENSG00000136574, GATA4, GATA binding protein 4, [Score=87.0, Expect=2e-18]; ENSG00000285109, GATA4, GATA binding protein 4, [Score=87.0, Expect=2e-18]} {Mouse: ENSMUSG00000005836, Gata6, GATA binding protein 6, [Score=87.0, Expect=2e-18]; ENSMUSG00000021944, Gata4, GATA binding protein 4, [Score=85.5, Expect=4e-18]} {Dmel: FBgn0032223, GATAd, [RH, Score=87.0, Expect=1e-18]} {Celegans: WBGene00001249, elt-1, Transcription factor elt-1, [Score=83.2, Expect=1e-17]} {Smed: dd_Smed_v6_4075_0_1, dd_Smed_v6_4075_0_1, [Score=80.5, Expect=9e-17]} {RNA1509_47157} {RNA1310_45834} {RNA815_33962} |