Data search


search
Exact
Search

Results for MligTC455_46192

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_46192 337 7.01 Mlig455_004908

Neo: -

Age: logFC(26M/2M)=-0.654

GALNT1 Mlig455_004908 {REF} {Length: 3368} {TRANSSPLICED} {Pfam: Glycosyl transferase family 2 [PF00535.28, score=106.6]; Ricin-type beta-trefoil lectin domain [PF00652.24, score=66.4]; Glycosyltransferase like family 2 [PF13641.8, score=31.4]; N-terminal domain of galactosyltransferase [PF02709.16, score=26.0]; Glycosyltransferase like family 2 [PF10111.11, score=19.9]; Ricin-type beta-trefoil lectin domain-like [PF14200.8, score=19.5]} {Human: ENSG00000141429, GALNT1, polypeptide N-acetylgalactosaminyltransferase 1, [Score=448, Expect=3e-151]; ENSG00000144278, GALNT13, polypeptide N-acetylgalactosaminyltransferase 13, [Score=444, Expect=1e-149]} {Mouse: ENSMUSG00000000420, Galnt1, polypeptide N-acetylgalactosaminyltransferase 1, [Score=449, Expect=9e-152]; ENSMUSG00000060988, Galnt13, polypeptide N-acetylgalactosaminyltransferase 13, [Score=446, Expect=1e-150]} {Dmel: FBgn0034025, GalNAc-T1, [RH, Score=450, Expect=9e-152]} {Celegans: WBGene00012934, gly-9, Probable N-acetylgalactosaminyltransferase 9, [RH, Score=501, Expect=4e-172]} {Smed: dd_Smed_v6_6094_0_1, dd_Smed_v6_6094_0_1, [RH, Score=608, Expect=0.0]} {RNA1509_17964, RNA1509_25159} {RNA1310_9124.1, RNA1509_17964} {RNA1509_17964, RNA815_5947}

Cumulative graph for MligTC455_46192

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.704 3.254 0.07767 0.61238
RegionR2 -0.014 3.254 0.85891 1.00000
RegionR3 0.776 3.254 0.40499 0.93215
RegionR4 2.157 3.254 0.02481 0.11864
RegionR5 1.403 3.254 0.09219 0.28890
RegionR6 0.939 3.254 0.31322 0.90229
RegionR7 0.687 3.254 0.50340 1.00000
RegionR8 0.754 3.254 0.49495 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.048 3.254 1.00000 1.00000
RegenerationR2 -0.325 3.254 0.64091 0.93161
RegenerationR3 -0.777 3.254 0.30413 0.73496
RegenerationR4 -0.47 3.254 0.54393 0.88987
RegenerationR5 -0.061 3.254 0.92534 1.00000
RegenerationR6 -0.416 3.254 0.56560 0.84886
RegenerationBL -1.021 3.254 0.21074 0.55415
RegenerationTP -1.849 3.254 0.04651 0.35666


Genes with expression patterns similar to MligTC455_46192

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_46192 337 7.01 Mlig455_004908

Neo: -

Age: logFC(26M/2M)=-0.654

GALNT1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_004908 {REF} {Length: 3368} {TRANSSPLICED} {Pfam: Glycosyl transferase family 2 [PF00535.28, score=106.6]; Ricin-type beta-trefoil lectin domain [PF00652.24, score=66.4]; Glycosyltransferase like family 2 [PF13641.8, score=31.4]; N-terminal domain of galactosyltransferase [PF02709.16, score=26.0]; Glycosyltransferase like family 2 [PF10111.11, score=19.9]; Ricin-type beta-trefoil lectin domain-like [PF14200.8, score=19.5]} {Human: ENSG00000141429, GALNT1, polypeptide N-acetylgalactosaminyltransferase 1, [Score=448, Expect=3e-151]; ENSG00000144278, GALNT13, polypeptide N-acetylgalactosaminyltransferase 13, [Score=444, Expect=1e-149]} {Mouse: ENSMUSG00000000420, Galnt1, polypeptide N-acetylgalactosaminyltransferase 1, [Score=449, Expect=9e-152]; ENSMUSG00000060988, Galnt13, polypeptide N-acetylgalactosaminyltransferase 13, [Score=446, Expect=1e-150]} {Dmel: FBgn0034025, GalNAc-T1, [RH, Score=450, Expect=9e-152]} {Celegans: WBGene00012934, gly-9, Probable N-acetylgalactosaminyltransferase 9, [RH, Score=501, Expect=4e-172]} {Smed: dd_Smed_v6_6094_0_1, dd_Smed_v6_6094_0_1, [RH, Score=608, Expect=0.0]} {RNA1509_17964, RNA1509_25159} {RNA1310_9124.1, RNA1509_17964} {RNA1509_17964, RNA815_5947}
2. MligTC455_50600 425 8.84 Mlig455_034076

Neo: -

Age: -

ABCF3 1.675 - - - 0.706 - 0.969 Mlig455_034076 {REF} {Length: 3450} {TRANSSPLICED} {Pfam: ABC transporter [PF00005.29, score=137.6]; ABC transporter [PF12848.9, score=91.4]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=60.0]; RecF/RecN/SMC N terminal domain [PF02463.21, score=35.7]; AAA ATPase domain [PF13191.8, score=24.3]; NACHT domain [PF05729.14, score=23.8]; AAA domain [PF13401.8, score=22.1]; RsgA GTPase [PF03193.18, score=20.1]; AAA ATPase domain [PF13175.8, score=20.1]; 50S ribosome-binding GTPase [PF01926.25, score=19.8]; AAA domain [PF13476.8, score=19.8]; AAA domain [PF13521.8, score=19.5]; P-loop containing region of AAA domain [PF13555.8, score=18.7]} {Human: ENSG00000161204, ABCF3, ATP binding cassette subfamily F member 3, [RH, Score=688, Expect=0.0]} {Mouse: ENSMUSG00000003234, Abcf3, ATP-binding cassette, sub-family F (GCN20), member 3, [RH, Score=680, Expect=0.0]} {Dmel: FBgn0036888, CG9330, [Score=657, Expect=0.0]} {Celegans: WBGene00018339, abcf-3, ABC transporter, class F, [Score=564, Expect=0.0]} {Smed: dd_Smed_v6_3822_0_1, dd_Smed_v6_3822_0_1, [RH, Score=633, Expect=0.0]} {RNA1509_10536} {RNA1310_9176} {RNA815_13140}
3. MligTC455_38467 215 4.47 Mlig455_015264

Neo: -

Age: -

IWS1 0.95 - - - - - 0.950 Mlig455_015264 {REF} {Length: 3282} {TRANSSPLICED} {Pfam: TFIIS helical bundle-like domain [PF08711.13, score=39.0]; Cornifin (SPRR) family [PF02389.17, score=20.9]} {Human: ENSG00000163166, IWS1, IWS1, SUPT6H interacting protein, [RH, Score=281, Expect=3e-82]} {Mouse: ENSMUSG00000024384, Iws1, IWS1, SUPT6 interacting protein, [RH, Score=278, Expect=5e-82]} {Dmel: FBgn0030738, CG9915, [RH, Score=226, Expect=1e-62]} {Celegans: WBGene00008729, F13B12.1, IWS1-like protein, [RH, Score=194, Expect=9e-54]} {Smed: dd_Smed_v6_995_0_1, dd_Smed_v6_995_0_1, [RH, Score=200, Expect=2e-56]} {RNA1509_17975} {RNA1310_3895.1} {RNA815_2445.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA