Data search


search
Exact
Search

Results for MligTC455_46221

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_46221 1035 21.56 Mlig455_022878

Neo: -

Age: -

SPPL2A Mlig455_022878 {REF} {Length: 3100} {TRANSSPLICED} {Pfam: Signal peptide peptidase [PF04258.15, score=132.1]; PA domain [PF02225.24, score=25.1]} {Human: ENSG00000138600, SPPL2A, signal peptide peptidase like 2A, [RH, Score=142, Expect=7e-36]} {Mouse: ENSMUSG00000027366, Sppl2a, signal peptide peptidase like 2A, [RH, Score=140, Expect=4e-35]; ENSMUSG00000035206, Sppl2b, signal peptide peptidase like 2B, [RH, Score=133, Expect=2e-32]} {Dmel: FBgn0031260, Spp, Signal peptide peptidase, [Score=71.2, Expect=6e-13]} {Celegans: WBGene00007979, imp-1, IntraMembrane Protease (IMPAS) family, [RH, Score=96.7, Expect=1e-20]} {Smed: dd_Smed_v6_3988_0_1, dd_Smed_v6_3988_0_1, [RH, Score=85.1, Expect=3e-17]} {RNA1509_22371, RNA1509_24398, RNA1509_30086} {RNA1310_7910, RNA1509_22371, RNA1509_24398, RNA1509_30086} {RNA1509_22371, RNA1509_24398, RNA1509_30086, RNA815_2707}

Cumulative graph for MligTC455_46221

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.355 4.701 0.65739 1.00000
RegionR2 -0.105 4.701 0.80798 1.00000
RegionR3 -0.216 4.701 0.52864 1.00000
RegionR4 -0.371 4.701 0.38453 0.70926
RegionR5 0.071 4.701 0.81870 1.00000
RegionR6 -0.063 4.701 0.85686 1.00000
RegionR7 0.254 4.701 0.51185 1.00000
RegionR8 0.075 4.701 0.87079 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -7.402 4.701 0.04317 0.67660
RegenerationR2 -0.204 4.701 0.60712 0.91857
RegenerationR3 -0.052 4.701 0.90561 1.00000
RegenerationR4 -0.051 4.701 0.91240 1.00000
RegenerationR5 0.243 4.701 0.55465 0.88849
RegenerationR6 -0.375 4.701 0.39798 0.73605
RegenerationBL -1.172 4.701 0.03439 0.20838
RegenerationTP 0.483 4.701 0.30640 0.75169


Genes with expression patterns similar to MligTC455_46221

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_46221 1035 21.56 Mlig455_022878

Neo: -

Age: -

SPPL2A 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_022878 {REF} {Length: 3100} {TRANSSPLICED} {Pfam: Signal peptide peptidase [PF04258.15, score=132.1]; PA domain [PF02225.24, score=25.1]} {Human: ENSG00000138600, SPPL2A, signal peptide peptidase like 2A, [RH, Score=142, Expect=7e-36]} {Mouse: ENSMUSG00000027366, Sppl2a, signal peptide peptidase like 2A, [RH, Score=140, Expect=4e-35]; ENSMUSG00000035206, Sppl2b, signal peptide peptidase like 2B, [RH, Score=133, Expect=2e-32]} {Dmel: FBgn0031260, Spp, Signal peptide peptidase, [Score=71.2, Expect=6e-13]} {Celegans: WBGene00007979, imp-1, IntraMembrane Protease (IMPAS) family, [RH, Score=96.7, Expect=1e-20]} {Smed: dd_Smed_v6_3988_0_1, dd_Smed_v6_3988_0_1, [RH, Score=85.1, Expect=3e-17]} {RNA1509_22371, RNA1509_24398, RNA1509_30086} {RNA1310_7910, RNA1509_22371, RNA1509_24398, RNA1509_30086} {RNA1509_22371, RNA1509_24398, RNA1509_30086, RNA815_2707}
2. MligTC455_28926 1969 41.03 Mlig455_005441, Mlig455_012027, Mlig455_061378

Neo: -

Age: -

Region-enriched R4: 1.857/0.01696

2.391 - 0.700 0.734 0.957 - -

Mlig455_005441 {REF} {Length: 476} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=56.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=32.7]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=63.2, Expect=4e-13]} {RNA1509_35318} {RNA1310_59.1} {RNA815_29.1}

Mlig455_012027 {REF} {Length: 2504} {RNA1509_11715} {RNA1310_46568} {RNA815_914.1}

Mlig455_061378 {REF} {Length: 5785} {TRANSSPLICED} {Pfam: Zinc knuckle [PF00098.25, score=22.4]} {RNA1509_13611} {RNA1310_59.1} {RNA815_29.1}
3. MligTC455_17103 388 8.08 Mlig455_036025

Neo: -

Age: logFC(26M/2M)=-0.267

NPEPPS 0.976 - - - 0.976 - - Mlig455_036025 {REF} {Length: 3810} {TRANSSPLICED} {Pfam: Peptidase family M1 domain [PF01433.22, score=288.0]; ERAP1-like C-terminal domain [PF11838.10, score=246.4]; Peptidase M1 N-terminal domain [PF17900.3, score=80.0]} {Human: ENSG00000141279, NPEPPS, aminopeptidase puromycin sensitive, [Score=662, Expect=0.0]} {Mouse: ENSMUSG00000001441, Npepps, aminopeptidase puromycin sensitive, [Score=564, Expect=0.0]} {Dmel: FBgn0261243, Psa, Puromycin sensitive aminopeptidase, [Score=627, Expect=0.0]} {Celegans: WBGene00003914, pam-1, Aminopeptidase, [Score=361, Expect=5e-111]} {Smed: dd_Smed_v6_1249_0_1, dd_Smed_v6_1249_0_1, [Score=494, Expect=1e-161]} {RNA1509_11430} {RNA1310_5328.1, RNA1509_11430} {RNA1509_11430, RNA815_9093}
4. MligTC455_17104 387 8.07 Mlig455_036113

Neo: -

Age: Up-Down-Down

NPEPPS 0.975 - - - 0.975 - - Mlig455_036113 {REF} {Length: 3730} {Pfam: Peptidase family M1 domain [PF01433.22, score=288.8]; ERAP1-like C-terminal domain [PF11838.10, score=246.2]; Peptidase M1 N-terminal domain [PF17900.3, score=92.6]} {Human: ENSG00000141279, NPEPPS, aminopeptidase puromycin sensitive, [Score=684, Expect=0.0]} {Mouse: ENSMUSG00000001441, Npepps, aminopeptidase puromycin sensitive, [Score=607, Expect=0.0]} {Dmel: FBgn0261243, Psa, Puromycin sensitive aminopeptidase, [Score=625, Expect=0.0]} {Celegans: WBGene00003914, pam-1, Aminopeptidase, [Score=454, Expect=2e-145]} {Smed: dd_Smed_v6_8086_0_1, dd_Smed_v6_8086_0_1, [Score=455, Expect=6e-146]} {RNA1509_11430} {RNA1310_5328.1} {RNA815_10163.1}
5. MligTC455_12680 212 4.42 Mlig455_045685

Neo: Irradiation

Age: logFC(26M/2M)=0.415

Region-enriched R5: 3.114/0.00000
Region-enriched R7: 2.586/0.01428

DCX 0.954 - - - 0.954 - - Mlig455_045685 {REF} {Length: 2523} {Pfam: Doublecortin [PF03607.19, score=120.2]} {Human: ENSG00000077279, DCX, doublecortin, [Score=170, Expect=7e-49]; ENSG00000170390, DCLK2, doublecortin like kinase 2, [Score=165, Expect=2e-44]; ENSG00000133083, DCLK1, doublecortin like kinase 1, [Score=163, Expect=3e-46]} {Mouse: ENSMUSG00000031285, Dcx, doublecortin, [Score=169, Expect=6e-49]; ENSMUSG00000028078, Dclk2, doublecortin-like kinase 2, [Score=164, Expect=2e-44]; ENSMUSG00000027797, Dclk1, doublecortin-like kinase 1, [Score=164, Expect=1e-46]} {Dmel: FBgn0261387, CG17528, [Score=132, Expect=2e-33]} {Celegans: WBGene00006993, zyg-8, Serine/threonine-protein kinase zyg-8, [Score=151, Expect=2e-40]} {Smed: dd_Smed_v6_13093_0_1, dd_Smed_v6_13093_0_1, [Score=68.2, Expect=2e-12]} {RNA1509_16450, RNA1509_21856, RNA1509_46615, RNA1509_47795, RNA1509_48068} {RNA1310_14746.2, RNA1509_16450, RNA1509_46615, RNA1509_47795, RNA1509_48068} {RNA1509_16450, RNA1509_46615, RNA1509_47795, RNA1509_48068, RNA815_2090.1}
6. MligTC455_12679 222 4.63 Mlig455_045675

Neo: Irradiation

Age: -

Region-enriched R5: 2.929/0.00001
Region-enriched R7: 2.827/0.00730

DCX 0.953 - - - 0.953 - - Mlig455_045675 {REF} {Length: 2705} {Pfam: Doublecortin [PF03607.19, score=120.2]} {Human: ENSG00000077279, DCX, doublecortin, [Score=171, Expect=4e-49]; ENSG00000170390, DCLK2, doublecortin like kinase 2, [Score=167, Expect=2e-45]; ENSG00000133083, DCLK1, doublecortin like kinase 1, [Score=165, Expect=1e-44]} {Mouse: ENSMUSG00000031285, Dcx, doublecortin, [Score=170, Expect=3e-49]; ENSMUSG00000027797, Dclk1, doublecortin-like kinase 1, [Score=166, Expect=2e-47]; ENSMUSG00000028078, Dclk2, doublecortin-like kinase 2, [Score=166, Expect=3e-45]} {Dmel: FBgn0261387, CG17528, [Score=130, Expect=7e-33]} {Celegans: WBGene00006993, zyg-8, Serine/threonine-protein kinase zyg-8, [Score=152, Expect=2e-40]} {Smed: dd_Smed_v6_13093_0_1, dd_Smed_v6_13093_0_1, [Score=68.2, Expect=2e-12]} {RNA1509_21856} {RNA1310_14746.2, RNA1509_21856} {RNA1509_21856, RNA815_2090.1}
7. MligTC455_28485 318 6.62 Mlig455_048648

Neo: -

Age: Down-Down-Up

Region-enriched R5: 2.840/0.00000
Region-enriched R4: 2.411/0.00385

0.953 - - - 0.953 - - Mlig455_048648 {REF} {Length: 4530} {Pfam: Domain of unknown function (DUF4203) [PF13886.8, score=59.7]; Glutaredoxin [PF00462.26, score=27.3]} {RNA1509_19898} {RNA1310_7121.1} {RNA815_1231}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA