Data search
Results for MligTC455_46315
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_46315 | 613 | 12.77 | Mlig455_070211 | Neo: - Age: Down-Up-Up |
REXO4 | Mlig455_070211 {REF} {Length: 1123} {TRANSSPLICED} {Pfam: Exonuclease [PF00929.26, score=55.1]; 3'-5' exonuclease [PF01612.22, score=19.2]} {Human: ENSG00000148300, REXO4, REX4 homolog, 3'-5' exonuclease, [RH, Score=215, Expect=9e-67]; ENSG00000280706, REXO4, REX4 homolog, 3'-5' exonuclease, [RH, Score=215, Expect=9e-67]} {Mouse: ENSMUSG00000052406, Rexo4, REX4, 3'-5' exonuclease, [RH, Score=210, Expect=7e-65]} {Dmel: FBgn0036405, CG6833, [RH, Score=169, Expect=2e-50]} {Celegans: WBGene00012465, Y17G7B.12, [RH, Score=167, Expect=2e-50]} {Smed: dd_Smed_v6_6075_0_1, dd_Smed_v6_6075_0_1, [RH, Score=194, Expect=8e-61]} {RNA1509_57339} {RNA1310_31175.1, RNA1509_57339} {RNA1509_57339, RNA815_14025} |
Cumulative graph for MligTC455_46315
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.234 | 3.995 | 0.16858 | 0.79362 | |
| RegionR2 | -0.664 | 3.995 | 0.18449 | 0.53675 | |
| RegionR3 | -0.556 | 3.995 | 0.18717 | 0.72252 | |
| RegionR4 | 0.218 | 3.995 | 0.61138 | 0.92241 | |
| RegionR5 | 0.811 | 3.995 | 0.01682 | 0.08530 | |
| RegionR6 | -0.121 | 3.995 | 0.77201 | 1.00000 | |
| RegionR7 | -0.031 | 3.995 | 0.95542 | 1.00000 | |
| RegionR8 | -0.89 | 3.995 | 0.27268 | 0.89579 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -8.351 | 3.995 | 0.01110 | 0.46010 | |
| RegenerationR2 | 0.295 | 3.995 | 0.50252 | 0.87242 | |
| RegenerationR3 | 0.662 | 3.995 | 0.15256 | 0.58227 | |
| RegenerationR4 | 0.39 | 3.995 | 0.37037 | 0.79410 | |
| RegenerationR5 | -0.072 | 3.995 | 0.85169 | 1.00000 | |
| RegenerationR6 | 0.128 | 3.995 | 0.78352 | 0.96921 | |
| RegenerationBL | 0.211 | 3.995 | 0.72308 | 1.00000 | |
| RegenerationTP | 1.172 | 3.995 | 0.05052 | 0.36858 |
Genes with expression patterns similar to MligTC455_46315
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_46315 | 613 | 12.77 | Mlig455_070211 | Neo: - Age: Down-Up-Up |
REXO4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_070211 {REF} {Length: 1123} {TRANSSPLICED} {Pfam: Exonuclease [PF00929.26, score=55.1]; 3'-5' exonuclease [PF01612.22, score=19.2]} {Human: ENSG00000148300, REXO4, REX4 homolog, 3'-5' exonuclease, [RH, Score=215, Expect=9e-67]; ENSG00000280706, REXO4, REX4 homolog, 3'-5' exonuclease, [RH, Score=215, Expect=9e-67]} {Mouse: ENSMUSG00000052406, Rexo4, REX4, 3'-5' exonuclease, [RH, Score=210, Expect=7e-65]} {Dmel: FBgn0036405, CG6833, [RH, Score=169, Expect=2e-50]} {Celegans: WBGene00012465, Y17G7B.12, [RH, Score=167, Expect=2e-50]} {Smed: dd_Smed_v6_6075_0_1, dd_Smed_v6_6075_0_1, [RH, Score=194, Expect=8e-61]} {RNA1509_57339} {RNA1310_31175.1, RNA1509_57339} {RNA1509_57339, RNA815_14025} |
| 2. | MligTC455_52190 | 488 | 10.17 | Mlig455_065357 | Neo: Int S/G2/M Age: - |
SMNDC1 | 0.971 | - | - | - | - | - | 0.971 | Mlig455_065357 {REF} {Length: 1981} {Pfam: Survival motor neuron protein (SMN) [PF06003.14, score=39.2]} {Human: ENSG00000119953, SMNDC1, survival motor neuron domain containing 1, [RH, Score=123, Expect=1e-33]} {Mouse: ENSMUSG00000025024, Smndc1, survival motor neuron domain containing 1, [RH, Score=123, Expect=9e-34]} {Dmel: FBgn0039977, CG17454, [RH, Score=110, Expect=7e-29]} {Celegans: WBGene00004891, smr-1, SMN (Survival of Motor Neuron protein) Related, [RH, Score=59.7, Expect=2e-10]} {Smed: dd_Smed_v6_5356_0_1, dd_Smed_v6_5356_0_1, [RH, Score=79.0, Expect=5e-18]} {RNA1509_22547, RNA1509_54494} {RNA1310_19986, RNA1509_22547, RNA1509_54494} {RNA1509_22547, RNA1509_54494, RNA815_8484.1} |
| 3. | MligTC455_47815 | 894 | 18.63 | Mlig455_041890 | Neo: - Age: - |
MYEF2 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_041890 {REF} {Length: 3513} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=137.6]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=22.9]; RNA binding motif [PF08777.13, score=19.6]} {Human: ENSG00000104177, MYEF2, myelin expression factor 2, [RH, Score=125, Expect=9e-31]} {Mouse: ENSMUSG00000049230, Gm9833, predicted gene 9833, [RH, Score=121, Expect=1e-29]; ENSMUSG00000027201, Myef2, myelin basic protein expression factor 2, repressor, [RH, Score=120, Expect=1e-29]} {Dmel: FBgn0267790, rump, rumpelstiltskin, [RH, Score=117, Expect=3e-28]} {Celegans: WBGene00007706, C25A1.4, [RH, Score=108, Expect=2e-25]} {Smed: dd_Smed_v6_2707_0_1, dd_Smed_v6_2707_0_1, [RH, Score=155, Expect=5e-42]} {RNA1509_26000, RNA1509_8146} {RNA1310_2998.1, RNA1509_26000, RNA1509_8146} {RNA1509_26000, RNA1509_8146, RNA815_978} |
| 4. | MligTC455_34507 | 122 | 2.55 | Mlig455_056674 | Neo: - Age: - |
SLBP | 0.952 | - | - | - | - | - | 0.952 | Mlig455_056674 {REF} {Length: 2076} {TRANSSPLICED} {Pfam: Histone RNA hairpin-binding protein RNA-binding domain [PF15247.8, score=82.7]} {Human: ENSG00000163950, SLBP, stem-loop binding protein, [RH, Score=86.7, Expect=4e-19]} {Mouse: ENSMUSG00000004642, Slbp, stem-loop binding protein, [RH, Score=86.3, Expect=1e-18]} {Dmel: FBgn0041186, Slbp, Stem-loop binding protein, [RH, Score=77.0, Expect=1e-15]} {Celegans: WBGene00000411, cdl-1, Histone RNA hairpin-binding protein, [RH, Score=67.8, Expect=2e-12]} {Smed: dd_Smed_v6_9628_0_1, dd_Smed_v6_9628_0_1, [RH, Score=100, Expect=4e-24]} {RNA1509_9558} {RNA1310_22526.2, RNA1509_9558} {RNA1509_9558, RNA815_16079} |
| 5. | MligTC455_19986 | 486 | 10.12 | Mlig455_045566 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.207/0.01087 |
TTC27 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_045566 {REF} {Length: 3563} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=60.1]; TPR repeat [PF13414.8, score=37.1]; Tetratricopeptide repeat [PF14559.8, score=36.8]; Tetratricopeptide repeat [PF00515.30, score=35.9]; Tetratricopeptide repeat [PF13428.8, score=35.1]; Tetratricopeptide repeat [PF13181.8, score=32.8]; Tetratricopeptide repeat [PF13431.8, score=27.6]; Tetratricopeptide repeat [PF13432.8, score=23.3]} {Human: ENSG00000018699, TTC27, tetratricopeptide repeat domain 27, [RH, Score=310, Expect=2e-92]} {Mouse: ENSMUSG00000024078, Ttc27, tetratricopeptide repeat domain 27, [RH, Score=314, Expect=3e-94]} {Dmel: FBgn0036772, CG5290, [RH, Score=205, Expect=2e-55]} {Celegans: WBGene00020600, trd-1, Tetratricopeptide repeat-containing protein trd-1, [RH, Score=184, Expect=1e-48]} {Smed: dd_Smed_v6_6638_0_1, dd_Smed_v6_6638_0_1, [RH, Score=313, Expect=6e-95]} {RNA1509_37354, RNA1509_46562, RNA1509_7866} {RNA1310_4912, RNA1509_37354, RNA1509_46562, RNA1509_7866} {RNA1509_37354, RNA1509_46562, RNA1509_7866, RNA815_1559} |
| 6. | MligTC455_18253 | 432 | 8.99 | Mlig455_047965 | Neo: Germline Age: Up-Down-Down Region-specific R4: 3.489 Region-enriched R4: 1.868/0.00919 |
GLMN | 0.95 | - | - | - | - | - | 0.950 | Mlig455_047965 {REF} {Length: 2789} {TRANSSPLICED} {Pfam: Uncharacterised protein family, YAP/Alf4/glomulin [PF08568.12, score=65.3]} {Human: ENSG00000174842, GLMN, glomulin, FKBP associated protein, [RH, Score=97.8, Expect=8e-21]} {Mouse: ENSMUSG00000029276, Glmn, glomulin, FKBP associated protein, [RH, Score=109, Expect=1e-24]} {Dmel: FBgn0050496, CG30496, [RH, Score=67.0, Expect=3e-11]} {Smed: dd_Smed_v6_9392_0_1, dd_Smed_v6_9392_0_1, [Score=68.9, Expect=3e-12]} {RNA1509_10083, RNA1509_27340, RNA1509_41762, RNA1509_46743, RNA1509_51960} {RNA1310_12822.1, RNA1509_10083, RNA1509_27340, RNA1509_41762, RNA1509_46743, RNA1509_51960} {RNA1509_10083, RNA1509_27340, RNA1509_41762, RNA1509_46743, RNA1509_51960, RNA815_2989.1} |
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