TomoSeq data search

Data search

Results for MligTC455_46321

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_46321

1436

29.92

Mlig455_034506

Neo: Int S/G2/M

Age: Down-Up-Up

Region-enriched R5: 1.494/0.00000
Region-enriched R4: 1.449/0.00099

Mlig455_034506 {REF} {Length: 973} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=35.0]} {RNA1509_28877} {RNA1310_35712} {RNA815_17005}

Cumulative graph for MligTC455_46321

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.553	5.121	0.02431	0.41591
RegionR2	-0.532	5.121	0.20865	0.57182
RegionR3	0.019	5.121	0.95044	1.00000
RegionR4	1.449	5.121	0.00006	0.00099
RegionR5	1.494	5.121	0.00000	0.00000
RegionR6	0.577	5.121	0.07546	0.51031
RegionR7	-0.15	5.121	0.73663	1.00000
RegionR8	-0.304	5.121	0.57304	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.012	5.121	0.99746	1.00000
RegenerationR2	0.325	5.121	0.28707	0.72976
RegenerationR3	0.615	5.121	0.06169	0.42054
RegenerationR4	0.122	5.121	0.71161	0.95771
RegenerationR5	-0.086	5.121	0.76285	0.97634
RegenerationR6	0.541	5.121	0.09219	0.37787
RegenerationBL	0.134	5.121	0.72804	1.00000
RegenerationTP	0.215	5.121	0.62207	0.97353

Genes with expression patterns similar to MligTC455_46321

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_46321	1436	29.92	Mlig455_034506	Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 1.494/0.00000 Region-enriched R4: 1.449/0.00099		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_034506 {REF} {Length: 973} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=35.0]} {RNA1509_28877} {RNA1310_35712} {RNA815_17005}
2.	MligTC455_49445	1942	40.46	Mlig455_044154	Neo: Neoblast Age: - Region-enriched R5: 1.005/0.00062	AK6	2.598	-	0.736	0.887	-	0.975	-	Mlig455_044154 {REF} {Length: 1086} {TRANSSPLICED} {Pfam: AAA domain [PF13238.8, score=90.3]; AAA domain [PF13521.8, score=27.3]; AAA domain [PF13401.8, score=26.9]; AAA ATPase domain [PF13191.8, score=26.5]; AAA domain [PF13207.8, score=23.7]; RNA helicase [PF00910.24, score=23.3]; AAA domain [PF13671.8, score=22.0]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=20.8]; Parvovirus non-structural protein NS1 [PF01057.19, score=20.6]; NTPase [PF03266.17, score=20.6]; Viral (Superfamily 1) RNA helicase [PF01443.20, score=19.7]; AAA domain (dynein-related subfamily) [PF07728.16, score=18.6]; Magnesium chelatase, subunit ChlI [PF01078.23, score=18.3]} {Human: ENSG00000279247, AK6, adenylate kinase 6, [RH, Score=184, Expect=8e-60]; ENSG00000085231, AK6, adenylate kinase 6, [RH, Score=184, Expect=8e-60]} {Mouse: ENSMUSG00000078941, Ak6, adenylate kinase 6, [RH, Score=192, Expect=5e-63]} {Dmel: FBgn0033754, Ak6, Adenylate kinase 6, [RH, Score=167, Expect=5e-53]} {Celegans: WBGene00008458, E02H1.6, Adenylate kinase isoenzyme 6 homolog, [RH, Score=170, Expect=3e-54]} {Smed: dd_Smed_v6_9332_0_1, dd_Smed_v6_9332_0_1, [RH, Score=184, Expect=3e-60]} {RNA1509_43277} {RNA1310_31173.1, RNA1509_43277} {RNA1509_43277, RNA815_14839}
3.	MligTC455_11264	2630	54.79	Mlig455_007585	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-1.309	EIF2A	1.724	-	-	-	-	0.774	0.950	Mlig455_007585 {REF} {Length: 1687} {Pfam: Eukaryotic translation initiation factor eIF2A [PF08662.13, score=92.3]} {Human: ENSG00000144895, EIF2A, eukaryotic translation initiation factor 2A, [Score=186, Expect=4e-52]} {Mouse: ENSMUSG00000027810, Eif2a, eukaryotic translation initiation factor 2A, [Score=186, Expect=6e-52]} {Dmel: FBgn0037135, CG7414, [Score=146, Expect=1e-37]} {Celegans: WBGene00008480, eif-2A, Eukaryotic translation initiation factor 2A, [Score=128, Expect=1e-31]} {Smed: dd_Smed_v6_3705_0_1, dd_Smed_v6_3705_0_1, [Score=79.3, Expect=9e-16]} {RNA1509_12274} {RNA1310_9127.2} {RNA815_2839.1}
4.	MligTC455_11265	5352	111.51	Mlig455_020754, Mlig455_020820, Mlig455_036064	Neo: Int S/G2/M Age: -	EIF2A	1.722	-	-	-	-	0.772	0.950	Mlig455_020754 {REF} {Length: 235} {NoTransDecoderORF} {RNA1509_22711} {RNA1310_72032} {RNA815_2839.1} Mlig455_020820 {REF} {Length: 2711} {Pfam: Eukaryotic translation initiation factor eIF2A [PF08662.13, score=202.5]} {Human: ENSG00000144895, EIF2A, eukaryotic translation initiation factor 2A, [RH, Score=407, Expect=3e-135]} {Mouse: ENSMUSG00000027810, Eif2a, eukaryotic translation initiation factor 2A, [RH, Score=423, Expect=2e-141]} {Dmel: FBgn0037135, CG7414, [RH, Score=355, Expect=1e-114]} {Celegans: WBGene00008480, eif-2A, Eukaryotic translation initiation factor 2A, [RH, Score=312, Expect=6e-99]} {Smed: dd_Smed_v6_3705_0_1, dd_Smed_v6_3705_0_1, [RH, Score=218, Expect=5e-64]} {RNA1509_1548} {RNA1310_9127.2} {RNA815_2839.1} Mlig455_036064 {REF} {Length: 2582} {Pfam: Eukaryotic translation initiation factor eIF2A [PF08662.13, score=202.5]} {Human: ENSG00000144895, EIF2A, eukaryotic translation initiation factor 2A, [RH, Score=407, Expect=3e-135]} {Mouse: ENSMUSG00000027810, Eif2a, eukaryotic translation initiation factor 2A, [RH, Score=423, Expect=2e-141]} {Dmel: FBgn0037135, CG7414, [RH, Score=355, Expect=1e-114]} {Celegans: WBGene00008480, eif-2A, Eukaryotic translation initiation factor 2A, [RH, Score=312, Expect=6e-99]} {Smed: dd_Smed_v6_3705_0_1, dd_Smed_v6_3705_0_1, [RH, Score=218, Expect=5e-64]} {RNA1509_12274, RNA1509_1548, RNA1509_22711, RNA1509_28835} {RNA1310_9127.2, RNA1509_12274, RNA1509_1548, RNA1509_22711, RNA1509_28835} {RNA1509_12274, RNA1509_1548, RNA1509_22711, RNA1509_28835, RNA815_2839.1}
5.	MligTC455_19112	860	17.91	Mlig455_002708	Neo: - Age: Up-Down-Up	TMC7	1.72	-	-	-	-	0.954	0.766	Mlig455_002708 {REF} {Length: 1704} {Pfam: TMC domain [PF07810.15, score=92.5]} {Human: ENSG00000170537, TMC7, transmembrane channel like 7, [Score=154, Expect=1e-40]} {Mouse: ENSMUSG00000042246, Tmc7, transmembrane channel-like gene family 7, [Score=155, Expect=9e-41]} {Celegans: WBGene00020490, tmc-1, Transmembrane channel-like protein 1, [RH, Score=63.9, Expect=1e-10]} {Smed: dd_Smed_v6_6619_0_1, dd_Smed_v6_6619_0_1, [Score=74.7, Expect=5e-15]} {RNA1509_34750} {RNA1310_394.4} {RNA815_2735}
6.	MligTC455_16217	1161	24.18	Mlig455_060186	Neo: - Age: -	CREB3L3	0.964	-	-	-	-	0.964	-	Mlig455_060186 {REF} {Length: 2891} {TRANSSPLICED} {Pfam: bZIP transcription factor [PF00170.23, score=39.7]; Basic region leucine zipper [PF07716.17, score=33.8]; bZIP Maf transcription factor [PF03131.19, score=25.6]} {Human: ENSG00000060566, CREB3L3, cAMP responsive element binding protein 3 like 3, [RH, Score=115, Expect=4e-27]; ENSG00000143578, CREB3L4, cAMP responsive element binding protein 3 like 4, [RH, Score=114, Expect=2e-27]} {Mouse: ENSMUSG00000035041, Creb3l3, cAMP responsive element binding protein 3-like 3, [RH, Score=110, Expect=8e-26]; ENSMUSG00000027938, Creb3l4, cAMP responsive element binding protein 3-like 4, [RH, Score=108, Expect=1e-25]} {Dmel: FBgn0004396, CrebA, Cyclic-AMP response element binding protein A, [Score=72.8, Expect=2e-13]} {Celegans: WBGene00002783, let-607, [RH, Score=81.6, Expect=4e-16]} {Smed: dd_Smed_v6_6220_0_1, dd_Smed_v6_6220_0_1, [RH, Score=110, Expect=1e-26]} {RNA1509_13672, RNA1509_33525, RNA1509_33809, RNA1509_43851, RNA1509_51653} {RNA1310_16352, RNA1509_13672, RNA1509_33525, RNA1509_33809, RNA1509_43851, RNA1509_51653} {RNA1509_13672, RNA1509_33525, RNA1509_33809, RNA1509_43851, RNA1509_51653, RNA815_20123}
7.	MligTC455_43645	1408	29.34	Mlig455_003452, Mlig455_030678	Neo: Int S/G2/M Age: - Region-enriched R5: 1.110/0.04713	PAPOLG	0.96	-	-	-	-	-	0.960	Mlig455_003452 {REF} {Length: 2907} {TRANSSPLICED} {Pfam: Poly(A) polymerase central domain [PF04928.19, score=327.0]; Poly(A) polymerase predicted RNA binding domain [PF04926.17, score=70.3]; Nucleotidyltransferase domain [PF01909.25, score=28.8]} {Human: ENSG00000115421, PAPOLG, poly(A) polymerase gamma, [RH, Score=498, Expect=5e-168]; ENSG00000090060, PAPOLA, poly(A) polymerase alpha, [RH, Score=474, Expect=5e-159]} {Mouse: ENSMUSG00000020273, Papolg, poly(A) polymerase gamma, [RH, Score=494, Expect=6e-167]; ENSMUSG00000021111, Papola, poly (A) polymerase alpha, [RH, Score=475, Expect=2e-159]} {Dmel: FBgn0015949, hrg, hiiragi, [RH, Score=466, Expect=8e-155]} {Celegans: WBGene00012528, pap-1, Poly-A Polymerase, [RH, Score=385, Expect=1e-125]} {Smed: dd_Smed_v6_3033_0_1, dd_Smed_v6_3033_0_1, [RH, Score=396, Expect=6e-132]} {RNA1509_24886, RNA1509_27319, RNA1509_5210} {RNA1310_6027, RNA1509_24886, RNA1509_27319, RNA1509_5210} {RNA1509_24886, RNA1509_27319, RNA1509_5210, RNA815_1803.1} Mlig455_030678 {REF} {Length: 2904} {TRANSSPLICED} {Pfam: Poly(A) polymerase central domain [PF04928.19, score=326.5]; Poly(A) polymerase predicted RNA binding domain [PF04926.17, score=70.3]; Nucleotidyltransferase domain [PF01909.25, score=28.8]} {Human: ENSG00000115421, PAPOLG, poly(A) polymerase gamma, [RH, Score=494, Expect=7e-167]} {Mouse: ENSMUSG00000020273, Papolg, poly(A) polymerase gamma, [RH, Score=491, Expect=8e-166]; ENSMUSG00000021111, Papola, poly (A) polymerase alpha, [RH, Score=468, Expect=1e-156]} {Dmel: FBgn0015949, hrg, hiiragi, [RH, Score=460, Expect=9e-153]} {Celegans: WBGene00012528, pap-1, Poly-A Polymerase, [RH, Score=386, Expect=2e-126]} {Smed: dd_Smed_v6_3033_0_1, dd_Smed_v6_3033_0_1, [RH, Score=393, Expect=1e-130]} {RNA1509_5210} {RNA1310_6027} {RNA815_1803.1}
8.	MligTC455_45313	253	5.27	Mlig455_067000	Neo: - Age: -	BCAS2	0.953	-	-	-	-	-	0.953	Mlig455_067000 {REF} {Length: 998} {TRANSSPLICED} {Pfam: Breast carcinoma amplified sequence 2 (BCAS2) [PF05700.13, score=235.8]} {Human: ENSG00000116752, BCAS2, BCAS2, pre-mRNA processing factor, [RH, Score=217, Expect=2e-70]} {Mouse: ENSMUSG00000005687, Bcas2, breast carcinoma amplified sequence 2, [RH, Score=217, Expect=1e-70]} {Dmel: FBgn0039558, BCAS2, [RH, Score=220, Expect=6e-71]} {Celegans: WBGene00020441, bcas-2, [RH, Score=135, Expect=9e-39]} {Smed: dd_Smed_v6_4364_0_1, dd_Smed_v6_4364_0_1, [RH, Score=193, Expect=1e-61]} {RNA1509_58231} {RNA1310_32353} {RNA815_18108}

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