Data search
Results for MligTC455_46345
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_46345 | 10703 | 222.97 | Mlig455_014083, Mlig455_014101 | Neo: - Age: Down-Up-Down Region-enriched R2: 1.080/0.02975 Regeneration-downregulated R2: -1.631 Regeneration-depleted R2: -1.631 |
Mlig455_014083 {REF} {Length: 871} {RNA1509_47616} {RNA1310_29211} {RNA815_21287.1} Mlig455_014101 {REF} {Length: 848} {Pfam: YtkA-like [PF13115.8, score=22.2]} {RNA1509_3571} {RNA1310_32268.1} {RNA815_21287.1} |
Cumulative graph for MligTC455_46345
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.113 | 7.917 | 0.02911 | 0.44155 | |
| RegionR2 | 1.08 | 7.917 | 0.00157 | 0.02975 | |
| RegionR3 | -0.739 | 7.917 | 0.02421 | 0.26532 | |
| RegionR4 | -0.047 | 7.917 | 0.89549 | 1.00000 | |
| RegionR5 | -0.217 | 7.917 | 0.48537 | 0.84907 | |
| RegionR6 | 0.393 | 7.917 | 0.19467 | 0.76318 | |
| RegionR7 | 0.094 | 7.917 | 0.75875 | 1.00000 | |
| RegionR8 | 0.549 | 7.917 | 0.08449 | 0.55084 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.331 | 7.917 | 0.06084 | 0.72807 | |
| RegenerationR2 | -1.631 | 7.917 | 0.00005 | 0.00812 | Specific for R2: -1.631 |
| RegenerationR3 | -0.883 | 7.917 | 0.02826 | 0.30227 | |
| RegenerationR4 | -0.769 | 7.917 | 0.06186 | 0.39836 | |
| RegenerationR5 | -0.242 | 7.917 | 0.54380 | 0.88248 | |
| RegenerationR6 | -0.964 | 7.917 | 0.01641 | 0.15833 | |
| RegenerationBL | -1.142 | 7.917 | 0.00163 | 0.03169 | |
| RegenerationTP | -1.056 | 7.917 | 0.00561 | 0.12579 |
Genes with expression patterns similar to MligTC455_46345
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_46345 | 10703 | 222.97 | Mlig455_014083, Mlig455_014101 | Neo: - Age: Down-Up-Down Region-enriched R2: 1.080/0.02975 Regeneration-downregulated R2: -1.631 Regeneration-depleted R2: -1.631 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_014083 {REF} {Length: 871} {RNA1509_47616} {RNA1310_29211} {RNA815_21287.1} Mlig455_014101 {REF} {Length: 848} {Pfam: YtkA-like [PF13115.8, score=22.2]} {RNA1509_3571} {RNA1310_32268.1} {RNA815_21287.1} |
|
| 2. | MligTC455_46346 | 6054 | 126.12 | Mlig455_014111 | Neo: - Age: Down-Down-Up Region-enriched R2: 1.106/0.02469 Regeneration-downregulated R2: -1.702 Regeneration-depleted R2: -1.702 |
5.97 | 0.999 | 0.998 | 0.996 | 0.999 | 0.997 | 0.981 | Mlig455_014111 {REF} {Length: 703} {RNA1509_32179} {RNA1310_32268.1} {RNA815_21287.1} | |
| 3. | MligTC455_51947 | 234 | 4.87 | Mlig455_048043, Mlig455_048063 | Neo: - Age: Down-Up-Down Regeneration-downregulated R4: -3.965 Regeneration-depleted R4: -3.965 |
NPFFR2 | 3.113 | 0.710 | 0.739 | - | 0.711 | 0.953 | - | Mlig455_048043 {REF} {Length: 2655} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=149.4]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=28.0]} {Human: ENSG00000056291, NPFFR2, neuropeptide FF receptor 2, [Score=136, Expect=8e-35]; ENSG00000164128, NPY1R, neuropeptide Y receptor Y1, [Score=130, Expect=5e-33]} {Mouse: ENSMUSG00000048337, Npy4r, neuropeptide Y receptor Y4, [Score=134, Expect=2e-34]; ENSMUSG00000035528, Npffr2, neuropeptide FF receptor 2, [Score=134, Expect=3e-34]; ENSMUSG00000036437, Npy1r, neuropeptide Y receptor Y1, [Score=130, Expect=5e-33]; ENSMUSG00000038071, Npy6r, neuropeptide Y receptor Y6, [Score=130, Expect=2e-33]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [RH, Score=200, Expect=2e-58]} {Celegans: WBGene00016110, npr-11, Putative neuropeptide Y receptor 11, [RH, Score=164, Expect=9e-46]} {Smed: dd_Smed_v6_16725_0_1, dd_Smed_v6_16725_0_1, [RH, Score=266, Expect=8e-84]} {RNA1509_49794} {RNA1310_30047.1} {RNA815_32644} Mlig455_048063 {REF} {Length: 2727} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=149.4]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=28.0]} {Human: ENSG00000056291, NPFFR2, neuropeptide FF receptor 2, [Score=136, Expect=7e-35]; ENSG00000164128, NPY1R, neuropeptide Y receptor Y1, [Score=130, Expect=8e-33]} {Mouse: ENSMUSG00000035528, Npffr2, neuropeptide FF receptor 2, [Score=134, Expect=3e-34]; ENSMUSG00000048337, Npy4r, neuropeptide Y receptor Y4, [Score=134, Expect=1e-34]; ENSMUSG00000038071, Npy6r, neuropeptide Y receptor Y6, [Score=130, Expect=2e-33]; ENSMUSG00000036437, Npy1r, neuropeptide Y receptor Y1, [Score=129, Expect=5e-33]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [RH, Score=200, Expect=3e-58]} {Celegans: WBGene00016110, npr-11, Putative neuropeptide Y receptor 11, [RH, Score=164, Expect=9e-46]} {Smed: dd_Smed_v6_16725_0_1, dd_Smed_v6_16725_0_1, [RH, Score=266, Expect=7e-84]} {RNA1509_49794} {RNA1310_30047.1, RNA1509_49794} {RNA1509_49794, RNA815_32644} |
| 4. | MligTC455_12113 | 72 | 1.5 | Mlig455_001687, Mlig455_071131 | Neo: - Age: - |
2.569 | - | 0.705 | 0.964 | 0.900 | - | - | Mlig455_001687 {REF} {Length: 809} {RNA1310_67367} {RNA815_37220} Mlig455_071131 {REF} {Length: 452} {RNA1509_45496} {RNA1310_67367} {RNA815_37220} |
|
| 5. | MligTC455_23098 | 38 | 0.78 | Mlig455_019169 | Neo: - Age: - Region-enriched R2: 6.693/0.03013 |
NR2E3 | 2.559 | - | 0.749 | 0.954 | 0.856 | - | - | Mlig455_019169 {REF} {Length: 2731} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=97.7]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=85.2]} {Human: ENSG00000278570, NR2E3, nuclear receptor subfamily 2 group E member 3, [RH, Score=220, Expect=3e-64]} {Mouse: ENSMUSG00000032292, Nr2e3, nuclear receptor subfamily 2, group E, member 3, [RH, Score=216, Expect=8e-63]} {Dmel: FBgn0034012, Hr51, Hormone receptor 51, [RH, Score=189, Expect=2e-51]} {Celegans: WBGene00001400, fax-1, Nuclear hormone receptor FAX-1, [RH, Score=179, Expect=1e-49]} {Smed: dd_Smed_v6_24412_0_1, dd_Smed_v6_24412_0_1, [RH, Score=196, Expect=3e-54]} {RNA1310_101745} |
| 6. | MligTC455_31464 | 20 | 0.41 | Mlig455_057157 | Neo: - Age: - |
2.546 | - | - | 0.950 | 0.816 | 0.780 | - | Mlig455_057157 {REF} {Length: 1285} {Pfam: Methyltransferase FkbM domain [PF05050.14, score=38.2]} {Smed: dd_Smed_v6_13824_0_1, dd_Smed_v6_13824_0_1, [RH, Score=47.0, Expect=2e-07]} {RNA1509_6604} {RNA1310_12860.1} {RNA815_6128.1} | |
| 7. | MligTC455_46046 | 18 | 0.37 | Mlig455_042344 | Neo: - Age: - |
ASL | 1.847 | - | - | 0.951 | 0.896 | - | - | Mlig455_042344 {REF} {Length: 1218} {Pfam: Lyase [PF00206.22, score=41.7]; WSC domain [PF01822.21, score=31.1]} {Human: ENSG00000126522, ASL, argininosuccinate lyase, [Score=77.8, Expect=4e-16]} {Mouse: ENSMUSG00000025533, Asl, argininosuccinate lyase, [Score=76.3, Expect=8e-16]} {Dmel: FBgn0032076, CG9510, [Score=70.5, Expect=6e-14]} {Smed: dd_Smed_v6_3792_0_1, dd_Smed_v6_3792_0_1, [Score=86.7, Expect=9e-20]} {RNA1509_17568} {RNA1310_77268} {RNA815_37535} |
| 8. | MligTC455_48127 | 47 | 0.97 | Mlig455_037173 | Neo: - Age: - |
1.807 | - | - | 0.951 | 0.856 | - | - | Mlig455_037173 {REF} {Length: 1938} {RNA1310_42908} {RNA815_22744} | |
| 9. | MligTC455_16439 | 147 | 3.07 | Mlig455_026017, Mlig455_070446 | Neo: - Age: - Region-enriched R2: 5.463/0.01159 |
SYN3 | 0.969 | - | - | 0.969 | - | - | - | Mlig455_026017 {REF} {Length: 1744} {Pfam: Synapsin, ATP binding domain [PF02750.16, score=157.5]} {Human: ENSG00000185666, SYN3, synapsin III, [Score=169, Expect=2e-47]; ENSG00000008056, SYN1, synapsin I, [Score=167, Expect=2e-46]; ENSG00000157152, SYN2, synapsin II, [Score=165, Expect=2e-49]} {Mouse: ENSMUSG00000037217, Syn1, synapsin I, [Score=169, Expect=2e-47]; ENSMUSG00000009394, Syn2, synapsin II, [Score=168, Expect=5e-48]; ENSMUSG00000059602, Syn3, synapsin III, [Score=168, Expect=1e-47]} {Dmel: FBgn0004575, Syn, Synapsin, [Score=169, Expect=3e-48]} {Celegans: WBGene00004913, snn-1, SyNapsiN; Synapsin, [Score=112, Expect=3e-28]} {Smed: dd_Smed_v6_3135_0_2, dd_Smed_v6_3135_0_2, [Score=167, Expect=3e-49]} {RNA1310_44259} {RNA815_33612} Mlig455_070446 {REF} {Length: 1739} {Pfam: Synapsin, ATP binding domain [PF02750.16, score=159.2]} {Human: ENSG00000185666, SYN3, synapsin III, [Score=169, Expect=2e-47]; ENSG00000008056, SYN1, synapsin I, [Score=168, Expect=1e-46]; ENSG00000157152, SYN2, synapsin II, [Score=164, Expect=4e-49]} {Mouse: ENSMUSG00000037217, Syn1, synapsin I, [Score=170, Expect=1e-47]; ENSMUSG00000059602, Syn3, synapsin III, [Score=168, Expect=2e-47]; ENSMUSG00000009394, Syn2, synapsin II, [Score=166, Expect=2e-47]} {Dmel: FBgn0004575, Syn, Synapsin, [Score=175, Expect=2e-50]} {Celegans: WBGene00004913, snn-1, SyNapsiN; Synapsin, [Score=107, Expect=2e-26]} {Smed: dd_Smed_v6_3135_0_2, dd_Smed_v6_3135_0_2, [Score=173, Expect=3e-51]} {RNA1310_44259} {RNA815_33612} |
| 10. | MligTC455_36704 | 63 | 1.32 | Mlig455_020575 | Neo: - Age: - Region-enriched R2: 5.118/0.04973 |
0.958 | - | - | 0.958 | - | - | - | Mlig455_020575 {REF} {Length: 4566} {NoTransDecoderORF} {RNA1509_44743} {RNA1310_5450.1} {RNA815_16253.1} | |
| 11. | MligTC455_49600 | 15 | 0.31 | Mlig455_011908 | Neo: - Age: - |
0.957 | - | - | 0.957 | - | - | - | Mlig455_011908 {REF} {Length: 3679} {RNA1509_36260} {RNA1310_622.1} {RNA815_2514.1} | |
| 12. | MligTC455_08591 | 42 | 0.87 | Mlig455_020619 | Neo: - Age: - |
PHOX2B | 0.956 | - | - | 0.956 | - | - | - | Mlig455_020619 {REF} {Length: 1413} {Pfam: Homeodomain [PF00046.31, score=80.5]} {Human: ENSG00000109132, PHOX2B, paired like homeobox 2B, [RH, Score=135, Expect=3e-36]; ENSG00000165462, PHOX2A, paired like homeobox 2A, [RH, Score=129, Expect=2e-34]} {Mouse: ENSMUSG00000012520, Phox2b, paired-like homeobox 2b, [RH, Score=135, Expect=2e-36]; ENSMUSG00000007946, Phox2a, paired-like homeobox 2a, [RH, Score=129, Expect=1e-34]} {Dmel: FBgn0025334, PHDP, Putative homeodomain protein, [RH, Score=119, Expect=2e-31]} {Celegans: WBGene00000440, ceh-17, C. Elegans Homeobox; CEH-17, [RH, Score=132, Expect=2e-36]} {Smed: dd_Smed_v6_29211_0_1, dd_Smed_v6_29211_0_1, [RH, Score=146, Expect=2e-40]} {RNA1310_111052} |
| 13. | MligTC455_18140 | 171 | 3.56 | Mlig455_033232 | Neo: - Age: Up-Down-Down Region-specific R2: 6.925 Region-enriched R2: 6.274/0.02921 |
TRPC5 | 0.954 | - | - | 0.954 | - | - | - | Mlig455_033232 {REF} {Length: 4524} {Pfam: Ion transport protein [PF00520.33, score=98.6]; Transient receptor ion channel II [PF08344.13, score=94.3]; Polycystin cation channel [PF08016.14, score=49.0]; Ankyrin repeats (many copies) [PF13637.8, score=37.2]; Ankyrin repeats (3 copies) [PF12796.9, score=33.2]; Ankyrin repeat [PF13606.8, score=25.5]; Ankyrin repeats (many copies) [PF13857.8, score=24.1]; Ankyrin repeat [PF00023.32, score=23.2]} {Human: ENSG00000072315, TRPC5, transient receptor potential cation channel subfamily C member 5, [RH, Score=743, Expect=0.0]; ENSG00000133107, TRPC4, transient receptor potential cation channel subfamily C member 4, [RH, Score=742, Expect=0.0]} {Mouse: ENSMUSG00000041710, Trpc5, transient receptor potential cation channel, subfamily C, member 5, [RH, Score=745, Expect=0.0]; ENSMUSG00000027748, Trpc4, transient receptor potential cation channel, subfamily C, member 4, [RH, Score=742, Expect=0.0]} {Dmel: FBgn0032593, Trpgamma, Transient receptor potential cation channel gamma, [RH, Score=848, Expect=0.0]} {Celegans: WBGene00006615, trp-2, TRP (Transient receptor potential) channel family; TRP homlogous cation channel protein, [RH, Score=696, Expect=0.0]} {Smed: dd_Smed_v6_20495_0_1, dd_Smed_v6_20495_0_1, [RH, Score=1016, Expect=0.0]} {RNA1509_34138} {RNA1310_12839} {RNA815_17637} |
| 14. | MligTC455_46004 | 40 | 0.83 | Mlig455_053399 | Neo: - Age: - |
0.953 | - | - | 0.953 | - | - | - | Mlig455_053399 {REF} {Length: 583} {NoTransDecoderORF} {RNA1310_66147} {RNA815_35487} |